RNA–Protein interactions for RNA: ENST00000476098.5

BEST3-204, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 1,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-204ENST00000476098 TRMT2BQ96GJ1 504 aaKnown RBP12.18□□□□□ -0.46
BEST3-204ENST00000476098 ADAM33Q9BZ11 813 aa12.18□□□□□ -0.46
BEST3-204ENST00000476098 ABCC13Q9NSE7 274 aa12.18□□□□□ -0.46
BEST3-204ENST00000476098 DNAI1Q9UI46 699 aa12.18□□□□□ -0.46
BEST3-204ENST00000476098 JRKLQ9Y4A0 524 aa12.18□□□□□ -0.46
BEST3-204ENST00000476098 TMEM265A0A087WTH1 108 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 KIF2AO00139 706 aaPredicted RBP12.17□□□□□ -0.46
BEST3-204ENST00000476098 SOX1O00570 391 aaPredicted RBP12.17□□□□□ -0.46
BEST3-204ENST00000476098 CAPN9O14815 690 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 NCAM1P13591 858 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 GTF2F1P35269 517 aaKnown RBP eCLIP12.17□□□□□ -0.46
BEST3-204ENST00000476098 SLC1A1P43005 524 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 PITX1P78337 314 aaPredicted RBP12.17□□□□□ -0.46
BEST3-204ENST00000476098 ATP11AP98196 1134 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 GRIN2CQ14957 1233 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 ACAP1Q15027 740 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 TAF12Q16514 161 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 SLC25A52Q3SY17 297 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 PPM1LQ5SGD2 360 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 MEI1Q5TIA1 1274 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 PRPF38BQ5VTL8 546 aaKnown RBP12.17□□□□□ -0.46
BEST3-204ENST00000476098 BTBD8Q5XKL5 378 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 PEX26Q7Z412 305 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 BNIPLQ7Z465 357 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 ITIH5Q86UX2 942 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 ARHGAP18Q8N392 663 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 VN1R2Q8NFZ6 395 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.17□□□□□ -0.46
BEST3-204ENST00000476098 OVCA2Q8WZ82 227 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 CD101Q93033 1021 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 ZNF512Q96ME7 567 aaPredicted RBP12.17□□□□□ -0.46
BEST3-204ENST00000476098 SLITRK1Q96PX8 696 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 NPY6RQ99463 290 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 CDCA3Q99618 268 aaPredicted RBP12.17□□□□□ -0.46
BEST3-204ENST00000476098 TRIM62Q9BVG3 475 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 TLR10Q9BXR5 811 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 ZNF334Q9HCZ1 680 aaPredicted RBP12.17□□□□□ -0.46
BEST3-204ENST00000476098 TLR8Q9NR97 1041 aaKnown RBP12.17□□□□□ -0.46
BEST3-204ENST00000476098 CALCOCO1Q9P1Z2 691 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 DPP7Q9UHL4 492 aa12.17□□□□□ -0.46
BEST3-204ENST00000476098 ZNF840PA6NDX5 716 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 ENC1O14682 589 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 CCL16O15467 120 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 NCK2O43639 380 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 LRCH4O75427 683 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 TCF4P15884 667 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 HOXA9P31269 272 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 PSEN1P49768 467 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 RAB6CQ53S08 254 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 OTUD1Q5VV17 481 aaPredicted RBP12.16□□□□□ -0.46
BEST3-204ENST00000476098 SNX30Q5VWJ9 437 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 CC2D1AQ6P1N0 951 aaPredicted RBP12.16□□□□□ -0.46
BEST3-204ENST00000476098 TMEM150AQ86TG1 271 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 TBCBQ99426 244 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 LRRC3Q9BY71 257 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 RAB6CQ9H0N0 254 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 PRDM12Q9H4Q4 367 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 NSUN3Q9H649 340 aaKnown RBP12.16□□□□□ -0.46
BEST3-204ENST00000476098 IL21Q9HBE4 155 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.16□□□□□ -0.46
BEST3-204ENST00000476098 CLIC5Q9NZA1 410 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 LMCD1Q9NZU5 365 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 AMFRQ9UKV5 643 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 PACSIN2Q9UNF0 486 aaPredicted RBP12.16□□□□□ -0.46
BEST3-204ENST00000476098 USTQ9Y2C2 406 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 SPOPO43791 374 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 TADA3O75528 432 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 ENDOD1O94919 500 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 F11P03951 625 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 ATP1A1P05023 1023 aaKnown RBP12.16□□□□□ -0.46
BEST3-204ENST00000476098 HNRNPA1P09651 372 aaKnown RBP eCLIP12.16□□□□□ -0.46
BEST3-204ENST00000476098 RARGP13631 454 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 CASQ1P31415 396 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 HDAC4P56524 1084 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 TAS2R40P59535 323 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 HYAL1Q12794 435 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 CDO1Q16878 200 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 TCEAL5Q5H9L2 206 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 TMC8Q8IU68 726 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 HS6ST3Q8IZP7 471 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 ELMOD1Q8N336 334 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 PDZD8Q8NEN9 1154 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 FAM172AQ8WUF8 416 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 PPP2R3CQ969Q6 453 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 HES6Q96HZ4 224 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 NAPGQ99747 312 aaPredicted RBP12.16□□□□□ -0.46
BEST3-204ENST00000476098 ZDHHC7Q9NXF8 308 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 RRN3Q9NYV6 651 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 UXTQ9UBK9 157 aaPredicted RBP12.16□□□□□ -0.46
BEST3-204ENST00000476098 NUDT5Q9UKK9 219 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 STAP1Q9ULZ2 295 aa12.16□□□□□ -0.46
BEST3-204ENST00000476098 CTAGE9A4FU28 777 aa12.15□□□□□ -0.46
BEST3-204ENST00000476098 M0QYT0 321 aa12.15□□□□□ -0.46
BEST3-204ENST00000476098 RNF8O76064 485 aa12.15□□□□□ -0.46
BEST3-204ENST00000476098 PAPLNO95428 1278 aa12.15□□□□□ -0.46
BEST3-204ENST00000476098 TBX18O95935 607 aa12.15□□□□□ -0.46
BEST3-204ENST00000476098 MIPP30301 263 aa12.15□□□□□ -0.46
BEST3-204ENST00000476098 PCK1P35558 622 aa12.15□□□□□ -0.46
BEST3-204ENST00000476098 PPP3CCP48454 512 aa12.15□□□□□ -0.46
BEST3-204ENST00000476098 SULT1E1P49888 294 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms