RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 MCM3P25205 808 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 ELF1P32519 619 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 FLT3P36888 993 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 SULT1E1P49888 294 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 SLC5A3P53794 718 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 TAS2R40P59535 323 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 ATP11AP98196 1134 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 ADCY1Q08828 1119 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 ZNF252P-AS1Q0IIN9 211 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 ZNF211Q13398 564 aaPredicted RBP12.78□□□□□ -0.36
MRPL55-227ENST00000475832 CDO1Q16878 200 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 SLC25A52Q3SY17 297 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 CCDC14Q49A88 953 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 DCAF6Q58WW2 860 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 PM20D1Q6GTS8 502 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 SCYL2Q6P3W7 929 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 PRSS55Q6UWB4 352 aaPredicted RBP12.78□□□□□ -0.36
MRPL55-227ENST00000475832 BEND5Q7L4P6 421 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 TAS1R1Q7RTX1 841 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 SPRED2Q7Z698 418 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 RNF168Q8IYW5 571 aaPredicted RBP12.78□□□□□ -0.36
MRPL55-227ENST00000475832 DEFB106AQ8N104 65 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 VPS52Q8N1B4 723 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 NUP93Q8N1F7 819 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 FAM172AQ8WUF8 416 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 ALG3Q92685 438 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 MS4A14Q96JA4 679 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 CFAP57Q96MR6 1250 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 RUNDC3BQ96NL0 473 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 PGLYRP2Q96PD5 576 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 SEPT5Q99719 369 aaPredicted RBP12.78□□□□□ -0.36
MRPL55-227ENST00000475832 RHOBTB2Q9BYZ6 727 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 ZWILCHQ9H900 591 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 C11orf16Q9NQ32 467 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 HOMER3Q9NSC5 361 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 HSFX1Q9UBD0 423 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 AFF4Q9UHB7 1163 aaKnown RBP12.78□□□□□ -0.36
MRPL55-227ENST00000475832 USP18Q9UMW8 372 aa12.78□□□□□ -0.36
MRPL55-227ENST00000475832 LRRD1A4D1F6 860 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 EPOPA6NHQ4 379 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 HHLA1C9JL84 531 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 C2CD2LO14523 706 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 GABBR2O75899 941 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 FGF18O76093 207 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 EFEMP2O95967 443 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 HAPLN1P10915 354 aaPredicted RBP12.77□□□□□ -0.37
MRPL55-227ENST00000475832 PYGMP11217 842 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 MIPP30301 263 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 GBP1P32455 592 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 OR1D2P34982 312 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 CA8P35219 290 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 MARCKSL1P49006 195 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 NDUFV1P49821 464 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 CACNA2D1P54289 1103 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 TAF5Q15542 800 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 TAF12Q16514 161 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 GLE1Q53GS7 698 aaKnown RBP12.77□□□□□ -0.37
MRPL55-227ENST00000475832 BTBD8Q5XKL5 378 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 MMGT1Q8N4V1 131 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 GPR161Q8N6U8 529 aaKnown RBP12.77□□□□□ -0.37
MRPL55-227ENST00000475832 KCTD6Q8NC69 237 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 CCDC26Q8TAB7 109 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 CLEC4CQ8WTT0 213 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 CLP1Q92989 425 aaKnown RBP12.77□□□□□ -0.37
MRPL55-227ENST00000475832 PIWIL1Q96J94 861 aaKnown RBP12.77□□□□□ -0.37
MRPL55-227ENST00000475832 SPATA17Q96L03 361 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 SLC2A13Q96QE2 648 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 TGS1Q96RS0 853 aaKnown RBP12.77□□□□□ -0.37
MRPL55-227ENST00000475832 ABCC13Q9NSE7 274 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 PCSK1NQ9UHG2 260 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 USP3Q9Y6I4 520 aa12.77□□□□□ -0.37
MRPL55-227ENST00000475832 TSC2P49815 1807 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 PDE2AO00408 941 aaPredicted RBP12.76□□□□□ -0.37
MRPL55-227ENST00000475832 DYNC1I1O14576 645 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 TJP3O95049 919 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 TRUB2O95900 331 aaKnown RBP12.76□□□□□ -0.37
MRPL55-227ENST00000475832 NCAM1P13591 858 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 CTNNB1P35222 781 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 RDXP35241 583 aaKnown RBP12.76□□□□□ -0.37
MRPL55-227ENST00000475832 ALDH1A3P47895 512 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 PSEN1P49768 467 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 CDR1P51861 262 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 AIF1P55008 147 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 YWHAGP61981 247 aaKnown RBP eCLIP12.76□□□□□ -0.37
MRPL55-227ENST00000475832 ROR1Q01973 937 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 SLC25A11Q02978 314 aaKnown RBP12.76□□□□□ -0.37
MRPL55-227ENST00000475832 DEUP1Q05D60 604 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 C2orf54Q08AI8 447 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 IFRD2Q12894 506 aaPredicted RBP12.76□□□□□ -0.37
MRPL55-227ENST00000475832 KRT81Q14533 505 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 VEPH1Q14D04 833 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 PDK2Q15119 407 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 DDR2Q16832 855 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 C15orf59Q2T9L4 293 aaPredicted RBP12.76□□□□□ -0.37
MRPL55-227ENST00000475832 ARL13BQ3SXY8 428 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 DCAF12L1Q5VU92 463 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 C8orf74Q6P047 294 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 RNF19BQ6ZMZ0 732 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 DENND5BQ6ZUT9 1274 aa12.76□□□□□ -0.37
MRPL55-227ENST00000475832 RSRC2Q7L4I2 434 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms