RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 A0A1W2PQF6 199 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 LNP1A1A4G5 178 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 TBC1D3BA6NDS4 549 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 CDX4O14627 284 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-207ENST00000475549 HOXC11O43248 304 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-207ENST00000475549 FOXD2O60548 495 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-207ENST00000475549 RHOBTB1O94844 696 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 CAVIN2O95810 425 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 FAM200BP0CF97 657 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 IRF1P10914 325 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 P4HA1P13674 534 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 ACO1P21399 889 aaKnown RBP7.41□□□□□ -1.22
HDAC3-207ENST00000475549 PSMC2P35998 433 aaKnown RBP7.41□□□□□ -1.22
HDAC3-207ENST00000475549 P2RY2P41231 377 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 PIK3CAP42336 1068 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 PTGER3P43115 390 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 KIF11P52732 1056 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 IRX4P78413 519 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 PNOCQ13519 176 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 ANO4Q32M45 955 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 AASDHQ4L235 1098 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-207ENST00000475549 ZNF394Q53GI3 561 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 USP39Q53GS9 565 aaKnown RBP7.41□□□□□ -1.22
HDAC3-207ENST00000475549 PPP1R26Q5T8A7 1209 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-207ENST00000475549 N4BP2L1Q5TBK1 243 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-207ENST00000475549 Q6ZNB5 142 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 TPGS1Q6ZTW0 290 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 TOGARAM2Q6ZUX3 1019 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 INTS8Q75QN2 995 aaKnown RBP7.41□□□□□ -1.22
HDAC3-207ENST00000475549 DDX42Q86XP3 938 aaKnown RBP eCLIP7.41□□□□□ -1.22
HDAC3-207ENST00000475549 FAM186BQ8IYM0 893 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 SLC4A11Q8NBS3 891 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 ENGASEQ8NFI3 743 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 CCDC26Q8TAB7 109 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 ERCC4Q92889 916 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-207ENST00000475549 TATDN2Q93075 761 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 OTUB2Q96DC9 234 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 ERLEC1Q96DZ1 483 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 NT5C1AQ9BXI3 368 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 DUSP16Q9BY84 665 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 SCAND2PQ9GZW5 306 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-207ENST00000475549 FBXO44Q9H4M3 255 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 MMRN2Q9H8L6 949 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 CYP3A43Q9HB55 503 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.41□□□□□ -1.22
HDAC3-207ENST00000475549 SH3BP1Q9Y3L3 701 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 STARD13Q9Y3M8 1113 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 FRYQ5TBA9 3013 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 SDK1Q7Z5N4 2213 aa7.41□□□□□ -1.22
HDAC3-207ENST00000475549 CHD8Q9HCK8 2581 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 TCRBV21S2A2A0A5A6 115 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 C4orf47A7E2U8 309 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 TULP2O00295 520 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 GIPC1O14908 333 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 CLSTN1O94985 981 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 KCNK5O95279 499 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 APODP05090 189 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 RARGP13631 454 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 RPL13P26373 211 aaKnown RBP7.4□□□□□ -1.22
HDAC3-207ENST00000475549 GBP1P32455 592 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 ATP5C1P36542 298 aaKnown RBP7.4□□□□□ -1.22
HDAC3-207ENST00000475549 WASP42768 502 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 PRCPP42785 496 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 RAD23BP54727 409 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 ENPEPQ07075 957 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 ELF2Q15723 593 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 EDRF1Q3B7T1 1238 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 CBWD6Q4V339 395 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 CBWD3Q5JTY5 395 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 CBWD5Q5RIA9 395 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 C10orf76Q5T2E6 689 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 KRT39Q6A163 491 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 ANKRD40Q6AI12 368 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 KIAA1211LQ6NV74 962 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 KLHDC10Q6PID8 442 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 BHLHA9Q7RTU4 235 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 TTC30AQ86WT1 665 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 TMEFF1Q8IYR6 380 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 FMR1NBQ8N0W7 255 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-207ENST00000475549 TERB1Q8NA31 727 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 C12orf50Q8NA57 414 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-207ENST00000475549 SPATA20Q8TB22 786 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 KCNV2Q8TDN2 545 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 HMGB4Q8WW32 186 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 NDRG1Q92597 394 aaKnown RBP7.4□□□□□ -1.22
HDAC3-207ENST00000475549 NIF3L1Q9GZT8 377 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 NACA2Q9H009 215 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 TMEM8AQ9HCN3 771 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 PNPLA8Q9NP80 782 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 TLR8Q9NR97 1041 aaKnown RBP7.4□□□□□ -1.22
HDAC3-207ENST00000475549 CISHQ9NSE2 258 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 MARK1Q9P0L2 795 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 DEC1Q9P2X7 70 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 DNMT3LQ9UJW3 386 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 FBXO10Q9UK96 956 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 CLEC4EQ9ULY5 219 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 ATP8B3O60423 1300 aa7.4□□□□□ -1.22
HDAC3-207ENST00000475549 ACACBO00763 2458 aa7.4□□□□□ -1.23
HDAC3-207ENST00000475549 SPEGQ15772 3267 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms