RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 AGPAT3Q9NRZ7 376 aa21.67■■□□□ 1.06
VPS36-203ENST00000475375 DNAAF2Q9NVR5 837 aaKnown RBP21.67■■□□□ 1.06
VPS36-203ENST00000475375 HCN2Q9UL51 889 aa21.67■■□□□ 1.06
VPS36-203ENST00000475375 EIF3DO15371 548 aaKnown RBP eCLIP21.66■■□□□ 1.06
VPS36-203ENST00000475375 AP1G2O75843 785 aa21.66■■□□□ 1.06
VPS36-203ENST00000475375 GNSP15586 552 aa21.66■■□□□ 1.06
VPS36-203ENST00000475375 ASIC1P78348 528 aa21.66■■□□□ 1.06
VPS36-203ENST00000475375 SNX30Q5VWJ9 437 aa21.66■■□□□ 1.06
VPS36-203ENST00000475375 KIAA1324Q6UXG2 1013 aaKnown RBP21.66■■□□□ 1.06
VPS36-203ENST00000475375 TPGS1Q6ZTW0 290 aa21.66■■□□□ 1.06
VPS36-203ENST00000475375 PROSER1Q86XN7 944 aa21.66■■□□□ 1.06
VPS36-203ENST00000475375 NELFCDQ8IXH7 590 aa21.66■■□□□ 1.06
VPS36-203ENST00000475375 SMARCD1Q96GM5 515 aa21.66■■□□□ 1.06
VPS36-203ENST00000475375 TNIP3Q96KP6 325 aa21.66■■□□□ 1.06
VPS36-203ENST00000475375 SLC6A17Q9H1V8 727 aa21.66■■□□□ 1.06
VPS36-203ENST00000475375 FAM124BQ9H5Z6 455 aaPredicted RBP21.66■■□□□ 1.06
VPS36-203ENST00000475375 KRT82Q9NSB4 513 aa21.66■■□□□ 1.06
VPS36-203ENST00000475375 SUSD2Q9UGT4 822 aa21.66■■□□□ 1.06
VPS36-203ENST00000475375 STARD13Q9Y3M8 1113 aa21.66■■□□□ 1.06
VPS36-203ENST00000475375 RAD54BQ9Y620 910 aa21.66■■□□□ 1.06
VPS36-203ENST00000475375 CEP192Q8TEP8 1941 aa21.66■■□□□ 1.06
VPS36-203ENST00000475375 FAM221BA6H8Z2 402 aa21.65■■□□□ 1.06
VPS36-203ENST00000475375 TAF4O00268 1085 aa21.65■■□□□ 1.06
VPS36-203ENST00000475375 TLR5O60602 858 aa21.65■■□□□ 1.06
VPS36-203ENST00000475375 TYRP14679 529 aa21.65■■□□□ 1.06
VPS36-203ENST00000475375 ATICP31939 592 aa21.65■■□□□ 1.06
VPS36-203ENST00000475375 CDH8P55286 799 aa21.65■■□□□ 1.06
VPS36-203ENST00000475375 SLC14A1Q13336 389 aa21.65■■□□□ 1.06
VPS36-203ENST00000475375 BIRC3Q13489 604 aa21.65■■□□□ 1.06
VPS36-203ENST00000475375 C19orf48Q6RUI8 117 aa21.65■■□□□ 1.06
VPS36-203ENST00000475375 SCARA5Q6ZMJ2 495 aa21.65■■□□□ 1.06
VPS36-203ENST00000475375 PNPLA1Q8N8W4 532 aa21.65■■□□□ 1.06
VPS36-203ENST00000475375 XXYLT1Q8NBI6 393 aa21.65■■□□□ 1.06
VPS36-203ENST00000475375 CD93Q9NPY3 652 aa21.65■■□□□ 1.06
VPS36-203ENST00000475375 ITPR1Q14643 2758 aa21.65■■□□□ 1.06
VPS36-203ENST00000475375 PCDH15Q96QU1 1955 aa21.65■■□□□ 1.06
VPS36-203ENST00000475375 STAU1O95793 577 aaKnown RBP21.64■■□□□ 1.05
VPS36-203ENST00000475375 FTH1P19P0C7X4 201 aa21.64■■□□□ 1.05
VPS36-203ENST00000475375 GOLGA8FQ08AF8 430 aa21.64■■□□□ 1.05
VPS36-203ENST00000475375 GOLGA8DPQ0D2H9 430 aa21.64■■□□□ 1.05
VPS36-203ENST00000475375 SCAPQ12770 1279 aa21.64■■□□□ 1.05
VPS36-203ENST00000475375 ZNF699Q32M78 642 aa21.64■■□□□ 1.05
VPS36-203ENST00000475375 WDR45BQ5MNZ6 344 aa21.64■■□□□ 1.05
VPS36-203ENST00000475375 NAXDQ8IW45 347 aa21.64■■□□□ 1.05
VPS36-203ENST00000475375 ZNF516Q92618 1163 aa21.64■■□□□ 1.05
VPS36-203ENST00000475375 FOXJ1Q92949 421 aa21.64■■□□□ 1.05
VPS36-203ENST00000475375 BHMTQ93088 406 aa21.64■■□□□ 1.05
VPS36-203ENST00000475375 DUSP9Q99956 384 aaKnown RBP21.64■■□□□ 1.05
VPS36-203ENST00000475375 XYLT2Q9H1B5 865 aa21.64■■□□□ 1.05
VPS36-203ENST00000475375 TNMDQ9H2S6 317 aa21.64■■□□□ 1.05
VPS36-203ENST00000475375 COMMD8Q9NX08 183 aa21.64■■□□□ 1.05
VPS36-203ENST00000475375 CACNA2D2Q9NY47 1150 aa21.64■■□□□ 1.05
VPS36-203ENST00000475375 WDR35Q9P2L0 1181 aa21.64■■□□□ 1.05
VPS36-203ENST00000475375 LSM7Q9UK45 103 aaKnown RBP21.64■■□□□ 1.05
VPS36-203ENST00000475375 MEI4A8MW99 385 aa21.63■■□□□ 1.05
VPS36-203ENST00000475375 PRRT4C9JH25 899 aa21.63■■□□□ 1.05
VPS36-203ENST00000475375 TGFB1I1O43294 461 aa21.63■■□□□ 1.05
VPS36-203ENST00000475375 CACNG3O60359 315 aa21.63■■□□□ 1.05
VPS36-203ENST00000475375 ZDHHC11BP0C7U3 371 aa21.63■■□□□ 1.05
VPS36-203ENST00000475375 MAOBP27338 520 aa21.63■■□□□ 1.05
VPS36-203ENST00000475375 AMPD3Q01432 767 aa21.63■■□□□ 1.05
VPS36-203ENST00000475375 SLC39A14Q15043 492 aa21.63■■□□□ 1.05
VPS36-203ENST00000475375 ZNF667Q5HYK9 610 aa21.63■■□□□ 1.05
VPS36-203ENST00000475375 FAM26FQ5R3K3 315 aa21.63■■□□□ 1.05
VPS36-203ENST00000475375 TOGARAM2Q6ZUX3 1019 aa21.63■■□□□ 1.05
VPS36-203ENST00000475375 PAQR9Q6ZVX9 377 aa21.63■■□□□ 1.05
VPS36-203ENST00000475375 HTR3DQ70Z44 454 aa21.63■■□□□ 1.05
VPS36-203ENST00000475375 ACOT1Q86TX2 421 aa21.63■■□□□ 1.05
VPS36-203ENST00000475375 ZNF507Q8TCN5 953 aa21.63■■□□□ 1.05
VPS36-203ENST00000475375 ZNF419Q96HQ0 510 aaPredicted RBP21.63■■□□□ 1.05
VPS36-203ENST00000475375 MRGPRX1Q96LB2 322 aa21.63■■□□□ 1.05
VPS36-203ENST00000475375 USP28Q96RU2 1077 aa21.63■■□□□ 1.05
VPS36-203ENST00000475375 TRIM9Q9C026 710 aa21.63■■□□□ 1.05
VPS36-203ENST00000475375 IL37Q9NZH6 218 aa21.63■■□□□ 1.05
VPS36-203ENST00000475375 TBX18O95935 607 aa21.62■■□□□ 1.05
VPS36-203ENST00000475375 DGKGP49619 791 aa21.62■■□□□ 1.05
VPS36-203ENST00000475375 PGFP49763 221 aa21.62■■□□□ 1.05
VPS36-203ENST00000475375 GRIK2Q13002 908 aa21.62■■□□□ 1.05
VPS36-203ENST00000475375 EPM2AIP1Q7L775 607 aaPredicted RBP21.62■■□□□ 1.05
VPS36-203ENST00000475375 ADAMTS14Q8WXS8 1223 aa21.62■■□□□ 1.05
VPS36-203ENST00000475375 GABRG3Q99928 467 aa21.62■■□□□ 1.05
VPS36-203ENST00000475375 FBXO44Q9H4M3 255 aa21.62■■□□□ 1.05
VPS36-203ENST00000475375 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.62■■□□□ 1.05
VPS36-203ENST00000475375 TLR8Q9NR97 1041 aaKnown RBP21.62■■□□□ 1.05
VPS36-203ENST00000475375 LAMA5O15230 3695 aa21.61■■□□□ 1.05
VPS36-203ENST00000475375 GJB3O75712 270 aa21.61■■□□□ 1.05
VPS36-203ENST00000475375 CCDC130P13994 396 aa21.61■■□□□ 1.05
VPS36-203ENST00000475375 CD6P30203 668 aa21.61■■□□□ 1.05
VPS36-203ENST00000475375 ATP5C1P36542 298 aaKnown RBP21.61■■□□□ 1.05
VPS36-203ENST00000475375 CASP4P49662 377 aa21.61■■□□□ 1.05
VPS36-203ENST00000475375 MAP3K7CLP57077 242 aa21.61■■□□□ 1.05
VPS36-203ENST00000475375 STARD3Q14849 445 aa21.61■■□□□ 1.05
VPS36-203ENST00000475375 FUKQ8N0W3 1084 aa21.61■■□□□ 1.05
VPS36-203ENST00000475375 ELMO3Q96BJ8 720 aa21.61■■□□□ 1.05
VPS36-203ENST00000475375 DHX58Q96C10 678 aa21.61■■□□□ 1.05
VPS36-203ENST00000475375 SMOQ99835 787 aa21.61■■□□□ 1.05
VPS36-203ENST00000475375 KLF16Q9BXK1 252 aaPredicted RBP21.61■■□□□ 1.05
VPS36-203ENST00000475375 MIR1-1HGQ9H1L0 117 aa21.61■■□□□ 1.05
VPS36-203ENST00000475375 CCDC86Q9H6F5 360 aaKnown RBP21.61■■□□□ 1.05
VPS36-203ENST00000475375 CD248Q9HCU0 757 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms