RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 SLC7A5Q01650 507 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 DHX34Q14147 1143 aaKnown RBP14.33□□□□□ -0.12
TRAF4-210ENST00000475329 KRT81Q14533 505 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 LLGL1Q15334 1064 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 TAZQ16635 292 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 TMEM240Q5SV17 173 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 RNF19BQ6ZMZ0 732 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 ZDHHC14Q8IZN3 488 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 ATAD1Q8NBU5 361 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 FBXO22Q8NEZ5 403 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 NT5C3BQ969T7 300 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 HERPUD2Q9BSE4 406 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 HTATIP2Q9BUP3 242 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 SNRNP25Q9BV90 132 aaKnown RBP14.33□□□□□ -0.12
TRAF4-210ENST00000475329 AMACRQ9UHK6 382 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 DMGDHQ9UI17 866 aaKnown RBP14.33□□□□□ -0.12
TRAF4-210ENST00000475329 EFR3BQ9Y2G0 817 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 CDY1Q9Y6F8 540 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 GBF1Q92538 1859 aa14.33□□□□□ -0.12
TRAF4-210ENST00000475329 FAM187AA6NFU0 413 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 M0QYT0 321 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 ENDOD1O94919 500 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 GJB5O95377 273 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 URODP06132 367 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 FYNP06241 537 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 KRT10P13645 584 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 COILP38432 576 aaPredicted RBP14.32□□□□□ -0.12
TRAF4-210ENST00000475329 CDH6P55285 790 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 MRPS25P82663 173 aaKnown RBP14.32□□□□□ -0.12
TRAF4-210ENST00000475329 DR1Q01658 176 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 ROR1Q01973 937 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 DSG1Q02413 1049 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 IFRD2Q12894 506 aaPredicted RBP14.32□□□□□ -0.12
TRAF4-210ENST00000475329 PDK2Q15119 407 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 ERMARDQ5T6L9 678 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 OTUD1Q5VV17 481 aaPredicted RBP14.32□□□□□ -0.12
TRAF4-210ENST00000475329 SYPL2Q5VXT5 272 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 KAZNQ674X7 775 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 SLC8B1Q6J4K2 584 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 RSPO2Q6UXX9 243 aaPredicted RBP14.32□□□□□ -0.12
TRAF4-210ENST00000475329 BEND5Q7L4P6 421 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 BNIPLQ7Z465 357 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 ANKS1BQ7Z6G8 1248 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 DDX53Q86TM3 631 aaKnown RBP14.32□□□□□ -0.12
TRAF4-210ENST00000475329 MAP7D3Q8IWC1 876 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 IFT20Q8IY31 132 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 NUP93Q8N1F7 819 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 FIBCD1Q8N539 461 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 SCAMP5Q8TAC9 235 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 HDAC7Q8WUI4 952 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 SLC9A7Q96T83 725 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 ZBED2Q9BTP6 218 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 CALN1Q9BXU9 219 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 ADAM33Q9BZ11 813 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 DCLK3Q9C098 648 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 FBXO44Q9H4M3 255 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 LRRC19Q9H756 370 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 STK39Q9UEW8 545 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 PCYOX1Q9UHG3 505 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 RASAL2Q9UJF2 1139 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 NAALADL1Q9UQQ1 740 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 PCDHB12Q9Y5F1 795 aa14.32□□□□□ -0.12
TRAF4-210ENST00000475329 C2CD2LO14523 706 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 TTI1O43156 1089 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 RTN3O95197 1032 aaPredicted RBP14.31□□□□□ -0.12
TRAF4-210ENST00000475329 HAPLN1P10915 354 aaPredicted RBP14.31□□□□□ -0.12
TRAF4-210ENST00000475329 NCAM1P13591 858 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 TNFRSF8P28908 595 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 GPR15P49685 360 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 ARSEP51690 589 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 CLCN6P51797 869 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 EPHB4P54760 987 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 YWHAGP61981 247 aaKnown RBP eCLIP14.31□□□□□ -0.12
TRAF4-210ENST00000475329 RPL10AP62906 217 aaKnown RBP14.31□□□□□ -0.12
TRAF4-210ENST00000475329 GUCY2DQ02846 1103 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 DEUP1Q05D60 604 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 DDR2Q16832 855 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 MGAT5BQ3V5L5 792 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 MAP9Q49MG5 647 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 BSPRYQ5W0U4 402 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 CCDC137Q6PK04 289 aaKnown RBP14.31□□□□□ -0.12
TRAF4-210ENST00000475329 BBS12Q6ZW61 710 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 VSIG1Q86XK7 387 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 RFX6Q8HWS3 928 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 PSTKQ8IV42 348 aaKnown RBP14.31□□□□□ -0.12
TRAF4-210ENST00000475329 ARHGAP18Q8N392 663 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 TTC9BQ8N6N2 239 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 SLC7A14Q8TBB6 771 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 C1orf54Q8WWF1 131 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 HERVK_113Q902F9 699 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 PGAP3Q96FM1 320 aaPredicted RBP14.31□□□□□ -0.12
TRAF4-210ENST00000475329 SPATA17Q96L03 361 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 SEPT5Q99719 369 aaPredicted RBP14.31□□□□□ -0.12
TRAF4-210ENST00000475329 MTIF3Q9H2K0 278 aaKnown RBP14.31□□□□□ -0.12
TRAF4-210ENST00000475329 FAM204AQ9H8W3 233 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 GPATCH2LQ9NWQ4 482 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 COMMD8Q9NX08 183 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 AP4E1Q9UPM8 1137 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 SCML2Q9UQR0 700 aa14.31□□□□□ -0.12
TRAF4-210ENST00000475329 INSL6Q9Y581 213 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms