RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 A0A1W2PPM1 405 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 A6NHS1 94 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 C2CD4BA6NLJ0 364 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 TPBGLP0DKB5 382 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 VDRP11473 427 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 KRT15P19012 456 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 CYP2B6P20813 491 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 CETN2P41208 172 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 ABL2P42684 1182 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 INCA1Q0VD86 236 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 WASHC2DQ5SRD0 308 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 SPRYD7Q5W111 196 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 NAIF1Q69YI7 327 aaPredicted RBP12.96□□□□□ -0.33
RNF220-211ENST00000474956 SPATA18Q8TC71 538 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 SH3TC2Q8TF17 1288 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 TBC1D10AQ9BXI6 508 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 SLCO1B3Q9NPD5 702 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 MORF4L1Q9UBU8 362 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 HEY1Q9Y5J3 304 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 CLUHO75153 1309 aa12.96□□□□□ -0.33
RNF220-211ENST00000474956 PAPSS1O43252 624 aaPredicted RBP12.96□□□□□ -0.34
RNF220-211ENST00000474956 NKD2Q969F2 451 aaPredicted RBP12.96□□□□□ -0.34
RNF220-211ENST00000474956 SLC7A6OSQ96CW6 309 aaPredicted RBP12.96□□□□□ -0.34
RNF220-211ENST00000474956 SNX27Q96L92 541 aa12.96□□□□□ -0.34
RNF220-211ENST00000474956 ZFP42Q96MM3 310 aa12.96□□□□□ -0.34
RNF220-211ENST00000474956 KLF6Q99612 283 aaPredicted RBP12.96□□□□□ -0.34
RNF220-211ENST00000474956 ABHD16BQ9H3Z7 469 aa12.96□□□□□ -0.34
RNF220-211ENST00000474956 PPCSQ9HAB8 311 aa12.96□□□□□ -0.34
RNF220-211ENST00000474956 MYADML2A6NDP7 307 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 TRAFD1O14545 582 aaPredicted RBP12.95□□□□□ -0.34
RNF220-211ENST00000474956 IL4RP24394 825 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 ACAT1P24752 427 aaKnown RBP12.95□□□□□ -0.34
RNF220-211ENST00000474956 GRM5P41594 1212 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 EIF3EP60228 445 aaKnown RBP12.95□□□□□ -0.34
RNF220-211ENST00000474956 PITX1P78337 314 aaPredicted RBP12.95□□□□□ -0.34
RNF220-211ENST00000474956 BASP1P80723 227 aaKnown RBP12.95□□□□□ -0.34
RNF220-211ENST00000474956 CMPK2Q5EBM0 449 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 PPP6R3Q5H9R7 873 aaPredicted RBP12.95□□□□□ -0.34
RNF220-211ENST00000474956 CST9Q5W186 159 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 OLFML1Q6UWY5 402 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 ENDOVQ8N8Q3 282 aaKnown RBP12.95□□□□□ -0.34
RNF220-211ENST00000474956 C10orf82Q8WW14 230 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 NUDCD1Q96RS6 583 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 FAM167BQ9BTA0 163 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 RRAGCQ9HB90 399 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 ZFATQ9P243 1243 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 ITGA11Q9UKX5 1188 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 GRID1Q9ULK0 1009 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 STRNO43815 780 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 HMGCRP04035 888 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 ITGAVP06756 1048 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 T-ENOLP0DO92 83 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 RBP3P10745 1247 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 LCP1P13796 627 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 GPD1P21695 349 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 CA4P22748 312 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 GABRB2P47870 512 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 DPYSL3Q14195 570 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 LCLAT1Q6UWP7 414 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 BBS12Q6ZW61 710 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 TLK2Q86UE8 772 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 LONP2Q86WA8 852 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 CMASQ8NFW8 434 aaPredicted RBP12.95□□□□□ -0.34
RNF220-211ENST00000474956 OSBPL1AQ9BXW6 950 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 DDX56Q9NY93 547 aaKnown RBP12.95□□□□□ -0.34
RNF220-211ENST00000474956 C2CD2Q9Y426 696 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 FARP1Q9Y4F1 1045 aaPredicted RBP12.95□□□□□ -0.34
RNF220-211ENST00000474956 CLDN5O00501 218 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 TKTP29401 623 aaKnown RBP12.95□□□□□ -0.34
RNF220-211ENST00000474956 ZNF143P52747 638 aaPredicted RBP12.95□□□□□ -0.34
RNF220-211ENST00000474956 POU5F1BQ06416 359 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 SMAD1Q15797 465 aaKnown RBP12.95□□□□□ -0.34
RNF220-211ENST00000474956 POLNQ7Z5Q5 900 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 LMNTD2Q8IXW0 634 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 FAM172AQ8WUF8 416 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 KBTBD7Q8WVZ9 684 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 VRTNQ9H8Y1 702 aa12.95□□□□□ -0.34
RNF220-211ENST00000474956 GOLGA8RI6L899 631 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 HNRNPCL1O60812 293 aaKnown RBP12.94□□□□□ -0.34
RNF220-211ENST00000474956 RNF8O76064 485 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 MYL3P08590 195 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 RPA3P35244 121 aaPredicted RBP12.94□□□□□ -0.34
RNF220-211ENST00000474956 TAP1Q03518 808 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 RASA2Q15283 850 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 HADHQ16836 314 aaKnown RBP12.94□□□□□ -0.34
RNF220-211ENST00000474956 SLC45A4Q5BKX6 768 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 HHATQ5VTY9 493 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 ZNF449Q6P9G9 518 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 ANKRD23Q86SG2 305 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 PYROXD2Q8N2H3 581 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 RSAD2Q8WXG1 361 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 GNEQ9Y223 722 aaKnown RBP12.94□□□□□ -0.34
RNF220-211ENST00000474956 SYNJ2BP-COX16A0A087WUM0 186 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 A8MXQ7 604 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 KRT7P08729 469 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 GM2AP17900 193 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 ATP6V1C1P21283 382 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 ATICP31939 592 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 BBS9Q3SYG4 887 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 PKDCCQ504Y2 493 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms