RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 OLFM2O95897 454 aa15.95■□□□□ 0.14
VARS-223ENST00000474643 MTIF2P46199 727 aaKnown RBP15.95■□□□□ 0.14
VARS-223ENST00000474643 FMO5P49326 533 aa15.95■□□□□ 0.14
VARS-223ENST00000474643 ATXN1P54253 815 aaKnown RBP15.95■□□□□ 0.14
VARS-223ENST00000474643 ZXDBP98169 803 aa15.95■□□□□ 0.14
VARS-223ENST00000474643 GAD2Q05329 585 aa15.95■□□□□ 0.14
VARS-223ENST00000474643 CCDC6Q16204 474 aa15.95■□□□□ 0.14
VARS-223ENST00000474643 USP39Q53GS9 565 aaKnown RBP15.95■□□□□ 0.14
VARS-223ENST00000474643 ANO7Q6IWH7 933 aa15.95■□□□□ 0.14
VARS-223ENST00000474643 TADA2BQ86TJ2 420 aa15.95■□□□□ 0.14
VARS-223ENST00000474643 C11orf74Q86VG3 221 aa15.95■□□□□ 0.14
VARS-223ENST00000474643 FAM114A1Q8IWE2 563 aa15.95■□□□□ 0.14
VARS-223ENST00000474643 ADGRG2Q8IZP9 1017 aa15.95■□□□□ 0.14
VARS-223ENST00000474643 CRYBG2Q8N1P7 616 aa15.95■□□□□ 0.14
VARS-223ENST00000474643 PGBD3Q8N328 593 aa15.95■□□□□ 0.14
VARS-223ENST00000474643 CCDC33Q8N5R6 958 aa15.95■□□□□ 0.14
VARS-223ENST00000474643 SEMA4DQ92854 862 aa15.95■□□□□ 0.14
VARS-223ENST00000474643 CYFIP2Q96F07 1278 aa15.95■□□□□ 0.14
VARS-223ENST00000474643 CNOT6LQ96LI5 555 aaKnown RBP15.95■□□□□ 0.14
VARS-223ENST00000474643 MED19A0JLT2 244 aaPredicted RBP15.94■□□□□ 0.14
VARS-223ENST00000474643 TBC1D3BA6NDS4 549 aa15.94■□□□□ 0.14
VARS-223ENST00000474643 ZBTB24O43167 697 aaPredicted RBP15.94■□□□□ 0.14
VARS-223ENST00000474643 KAT7O95251 611 aa15.94■□□□□ 0.14
VARS-223ENST00000474643 ACO1P21399 889 aaKnown RBP15.94■□□□□ 0.14
VARS-223ENST00000474643 ERCC5P28715 1186 aaPredicted RBP15.94■□□□□ 0.14
VARS-223ENST00000474643 HOXC13P31276 330 aa15.94■□□□□ 0.14
VARS-223ENST00000474643 TIE1P35590 1138 aa15.94■□□□□ 0.14
VARS-223ENST00000474643 ATP5C1P36542 298 aaKnown RBP15.94■□□□□ 0.14
VARS-223ENST00000474643 OPRD1P41143 372 aa15.94■□□□□ 0.14
VARS-223ENST00000474643 EIF2DP41214 584 aaKnown RBP15.94■□□□□ 0.14
VARS-223ENST00000474643 GRIA2P42262 883 aa15.94■□□□□ 0.14
VARS-223ENST00000474643 MRPS21P82921 87 aaKnown RBP15.94■□□□□ 0.14
VARS-223ENST00000474643 CT47A1Q5JQC4 288 aaPredicted RBP15.94■□□□□ 0.14
VARS-223ENST00000474643 LY6G5CQ5SRR4 150 aa15.94■□□□□ 0.14
VARS-223ENST00000474643 TTC39CQ8N584 583 aa15.94■□□□□ 0.14
VARS-223ENST00000474643 NAT16Q8N8M0 369 aa15.94■□□□□ 0.14
VARS-223ENST00000474643 USP33Q8TEY7 942 aa15.94■□□□□ 0.14
VARS-223ENST00000474643 SPACA7Q96KW9 195 aa15.94■□□□□ 0.14
VARS-223ENST00000474643 HEXIM2Q96MH2 286 aaKnown RBP15.94■□□□□ 0.14
VARS-223ENST00000474643 SMOQ99835 787 aa15.94■□□□□ 0.14
VARS-223ENST00000474643 TPSD1Q9BZJ3 242 aa15.94■□□□□ 0.14
VARS-223ENST00000474643 APOBEC3GQ9HC16 384 aaKnown RBP15.94■□□□□ 0.14
VARS-223ENST00000474643 POLMQ9NP87 494 aaPredicted RBP15.94■□□□□ 0.14
VARS-223ENST00000474643 ANO10Q9NW15 660 aa15.94■□□□□ 0.14
VARS-223ENST00000474643 TNFRSF10BO14763 440 aa15.93■□□□□ 0.14
VARS-223ENST00000474643 EPN2O95208 641 aa15.93■□□□□ 0.14
VARS-223ENST00000474643 KLF8O95600 359 aaPredicted RBP15.93■□□□□ 0.14
VARS-223ENST00000474643 AFPP02771 609 aaKnown RBP15.93■□□□□ 0.14
VARS-223ENST00000474643 TGM1P22735 817 aa15.93■□□□□ 0.14
VARS-223ENST00000474643 CREB5Q02930 508 aa15.93■□□□□ 0.14
VARS-223ENST00000474643 INCA1Q0VD86 236 aa15.93■□□□□ 0.14
VARS-223ENST00000474643 KCNH2Q12809 1159 aa15.93■□□□□ 0.14
VARS-223ENST00000474643 LRMPQ12912 555 aa15.93■□□□□ 0.14
VARS-223ENST00000474643 ZNF394Q53GI3 561 aa15.93■□□□□ 0.14
VARS-223ENST00000474643 EOGTQ5NDL2 527 aa15.93■□□□□ 0.14
VARS-223ENST00000474643 C10orf120Q5SQS8 335 aa15.93■□□□□ 0.14
VARS-223ENST00000474643 CAVIN1Q6NZI2 390 aaKnown RBP15.93■□□□□ 0.14
VARS-223ENST00000474643 RHBDF2Q6PJF5 856 aa15.93■□□□□ 0.14
VARS-223ENST00000474643 PAQR9Q6ZVX9 377 aa15.93■□□□□ 0.14
VARS-223ENST00000474643 TRMT11Q7Z4G4 463 aaKnown RBP15.93■□□□□ 0.14
VARS-223ENST00000474643 TRIM59Q8IWR1 403 aa15.93■□□□□ 0.14
VARS-223ENST00000474643 ANP32EQ9BTT0 268 aa15.93■□□□□ 0.14
VARS-223ENST00000474643 DEC1Q9P2X7 70 aa15.93■□□□□ 0.14
VARS-223ENST00000474643 NAGPAQ9UK23 515 aa15.93■□□□□ 0.14
VARS-223ENST00000474643 MMP17Q9ULZ9 603 aa15.93■□□□□ 0.14
VARS-223ENST00000474643 PCDHGA5Q9Y5G8 931 aa15.93■□□□□ 0.14
VARS-223ENST00000474643 ATG2BQ96BY7 2078 aa15.93■□□□□ 0.14
VARS-223ENST00000474643 K7EQS6 105 aa15.92■□□□□ 0.14
VARS-223ENST00000474643 CYP26A1O43174 497 aa15.92■□□□□ 0.14
VARS-223ENST00000474643 MAP3K13O43283 966 aa15.92■□□□□ 0.14
VARS-223ENST00000474643 BEST1O76090 585 aa15.92■□□□□ 0.14
VARS-223ENST00000474643 RALAP11233 206 aa15.92■□□□□ 0.14
VARS-223ENST00000474643 MPLP40238 635 aa15.92■□□□□ 0.14
VARS-223ENST00000474643 SLC6A11P48066 632 aa15.92■□□□□ 0.14
VARS-223ENST00000474643 MARSP56192 900 aaKnown RBP15.92■□□□□ 0.14
VARS-223ENST00000474643 MCCD1P59942 119 aaPredicted RBP15.92■□□□□ 0.14
VARS-223ENST00000474643 SF3A2Q15428 464 aaKnown RBP15.92■□□□□ 0.14
VARS-223ENST00000474643 STX1AQ16623 288 aa15.92■□□□□ 0.14
VARS-223ENST00000474643 HSF5Q4G112 596 aaPredicted RBP15.92■□□□□ 0.14
VARS-223ENST00000474643 HSP90AA4PQ58FG1 418 aa15.92■□□□□ 0.14
VARS-223ENST00000474643 SNX30Q5VWJ9 437 aa15.92■□□□□ 0.14
VARS-223ENST00000474643 CLEC20AQ6ZU45 233 aa15.92■□□□□ 0.14
VARS-223ENST00000474643 BBS7Q8IWZ6 715 aa15.92■□□□□ 0.14
VARS-223ENST00000474643 ALLCQ8N6M5 410 aa15.92■□□□□ 0.14
VARS-223ENST00000474643 DDX1Q92499 740 aaKnown RBP15.92■□□□□ 0.14
VARS-223ENST00000474643 EZH1Q92800 747 aaPredicted RBP15.92■□□□□ 0.14
VARS-223ENST00000474643 NT5C1BQ96P26 610 aa15.92■□□□□ 0.14
VARS-223ENST00000474643 XPO6Q96QU8 1125 aaKnown RBP15.92■□□□□ 0.14
VARS-223ENST00000474643 CDK5RAP1Q96SZ6 601 aaKnown RBP15.92■□□□□ 0.14
VARS-223ENST00000474643 HNRNPABQ99729 332 aaKnown RBP15.92■□□□□ 0.14
VARS-223ENST00000474643 THAP9Q9H5L6 903 aa15.92■□□□□ 0.14
VARS-223ENST00000474643 CSNK1G1Q9HCP0 422 aa15.92■□□□□ 0.14
VARS-223ENST00000474643 SPHK2Q9NRA0 654 aa15.92■□□□□ 0.14
VARS-223ENST00000474643 TMEM63CQ9P1W3 806 aa15.92■□□□□ 0.14
VARS-223ENST00000474643 EBF1Q9UH73 591 aa15.92■□□□□ 0.14
VARS-223ENST00000474643 SCML2Q9UQR0 700 aa15.92■□□□□ 0.14
VARS-223ENST00000474643 INVSQ9Y283 1065 aa15.92■□□□□ 0.14
VARS-223ENST00000474643 CACNA1AO00555 2505 aa15.92■□□□□ 0.14
VARS-223ENST00000474643 NEDD8-MDP1E9PL57 170 aa15.91■□□□□ 0.14
VARS-223ENST00000474643 PES1O00541 588 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms