RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 HOXC13P31276 330 aa16.81■□□□□ 0.28
ITGB1-210ENST00000474568 PLA2G4AP47712 749 aa16.81■□□□□ 0.28
ITGB1-210ENST00000474568 PKDCCQ504Y2 493 aa16.81■□□□□ 0.28
ITGB1-210ENST00000474568 LY6G5CQ5SRR4 150 aa16.81■□□□□ 0.28
ITGB1-210ENST00000474568 PMF1Q6P1K2 205 aa16.81■□□□□ 0.28
ITGB1-210ENST00000474568 DENND1BQ6P3S1 775 aa16.81■□□□□ 0.28
ITGB1-210ENST00000474568 PKN3Q6P5Z2 889 aa16.81■□□□□ 0.28
ITGB1-210ENST00000474568 RHBDF2Q6PJF5 856 aa16.81■□□□□ 0.28
ITGB1-210ENST00000474568 RSRC2Q7L4I2 434 aaKnown RBP16.81■□□□□ 0.28
ITGB1-210ENST00000474568 ADGRG2Q8IZP9 1017 aa16.81■□□□□ 0.28
ITGB1-210ENST00000474568 SIX6OS1Q8N1H7 587 aa16.81■□□□□ 0.28
ITGB1-210ENST00000474568 SIX2Q9NPC8 291 aa16.81■□□□□ 0.28
ITGB1-210ENST00000474568 POLR3BQ9NW08 1133 aaPredicted RBP16.81■□□□□ 0.28
ITGB1-210ENST00000474568 TMEM63CQ9P1W3 806 aa16.81■□□□□ 0.28
ITGB1-210ENST00000474568 TBC1D14Q9P2M4 693 aa16.81■□□□□ 0.28
ITGB1-210ENST00000474568 APEX2Q9UBZ4 518 aa16.81■□□□□ 0.28
ITGB1-210ENST00000474568 DNMT3LQ9UJW3 386 aa16.81■□□□□ 0.28
ITGB1-210ENST00000474568 KIF26AQ9ULI4 1882 aaPredicted RBP16.81■□□□□ 0.28
ITGB1-210ENST00000474568 MYH10P35580 1976 aa16.8■□□□□ 0.28
ITGB1-210ENST00000474568 THAP12O43422 761 aa16.8■□□□□ 0.28
ITGB1-210ENST00000474568 RNF40O75150 1001 aa16.8■□□□□ 0.28
ITGB1-210ENST00000474568 PNMA6AP0CW24 399 aaPredicted RBP16.8■□□□□ 0.28
ITGB1-210ENST00000474568 OPRD1P41143 372 aa16.8■□□□□ 0.28
ITGB1-210ENST00000474568 NBL1P41271 181 aa16.8■□□□□ 0.28
ITGB1-210ENST00000474568 SLC6A11P48066 632 aa16.8■□□□□ 0.28
ITGB1-210ENST00000474568 PSEN1P49768 467 aa16.8■□□□□ 0.28
ITGB1-210ENST00000474568 STX1AQ16623 288 aa16.8■□□□□ 0.28
ITGB1-210ENST00000474568 GAB4Q2WGN9 574 aa16.8■□□□□ 0.28
ITGB1-210ENST00000474568 TCP11X2Q5H9J9 407 aa16.8■□□□□ 0.28
ITGB1-210ENST00000474568 BTBD8Q5XKL5 378 aa16.8■□□□□ 0.28
ITGB1-210ENST00000474568 ENOSF1Q7L5Y1 443 aa16.8■□□□□ 0.28
ITGB1-210ENST00000474568 BHLHA9Q7RTU4 235 aa16.8■□□□□ 0.28
ITGB1-210ENST00000474568 TADA2BQ86TJ2 420 aa16.8■□□□□ 0.28
ITGB1-210ENST00000474568 ARHGAP18Q8N392 663 aa16.8■□□□□ 0.28
ITGB1-210ENST00000474568 ENOX1Q8TC92 643 aaKnown RBP16.8■□□□□ 0.28
ITGB1-210ENST00000474568 EDEM1Q92611 657 aa16.8■□□□□ 0.28
ITGB1-210ENST00000474568 EZH1Q92800 747 aaPredicted RBP16.8■□□□□ 0.28
ITGB1-210ENST00000474568 PRMT8Q9NR22 394 aaPredicted RBP16.8■□□□□ 0.28
ITGB1-210ENST00000474568 ANO10Q9NW15 660 aa16.8■□□□□ 0.28
ITGB1-210ENST00000474568 CLIC5Q9NZA1 410 aa16.8■□□□□ 0.28
ITGB1-210ENST00000474568 LSM7Q9UK45 103 aaKnown RBP16.8■□□□□ 0.28
ITGB1-210ENST00000474568 DNAJC12Q9UKB3 198 aa16.8■□□□□ 0.28
ITGB1-210ENST00000474568 FBXO4Q9UKT5 387 aa16.8■□□□□ 0.28
ITGB1-210ENST00000474568 PATJQ8NI35 1801 aa16.8■□□□□ 0.28
ITGB1-210ENST00000474568 SLC12A8A0AV02 714 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 GTPBP10A4D1E9 387 aaKnown RBP16.79■□□□□ 0.28
ITGB1-210ENST00000474568 ANTXRLA6NF34 631 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 YJEFN3A6XGL0 299 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 BECN2A8MW95 431 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 E7ENQ6 273 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 GABBR2O75899 941 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 ADH1CP00326 375 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 ADH5P11766 374 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 DRD1P21728 446 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 GNA15P30679 374 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 HOXD11P31277 338 aaPredicted RBP16.79■□□□□ 0.28
ITGB1-210ENST00000474568 CXCL12P48061 93 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 CCR3P51677 355 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 SEC13P55735 322 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 KDSRQ06136 332 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 GOLGA8FQ08AF8 430 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 GOLGA8DPQ0D2H9 430 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 STILQ15468 1287 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 ANO4Q32M45 955 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 CT47A1Q5JQC4 288 aaPredicted RBP16.79■□□□□ 0.28
ITGB1-210ENST00000474568 C12orf40Q86WS4 652 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 SPEM1Q8N4L4 309 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 NAT16Q8N8M0 369 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 CLEC4CQ8WTT0 213 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 SLC35F5Q8WV83 523 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 KCTD13Q8WZ19 329 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 LSM14BQ9BX40 385 aaKnown RBP16.79■□□□□ 0.28
ITGB1-210ENST00000474568 MIS12Q9H081 205 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 VPS16Q9H269 839 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 ST7Q9NRC1 585 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 FANCLQ9NW38 375 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 CNTN6Q9UQ52 1028 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 MYO16Q9Y6X6 1858 aa16.79■□□□□ 0.28
ITGB1-210ENST00000474568 GREM1O60565 184 aa16.78■□□□□ 0.28
ITGB1-210ENST00000474568 GFRA3O60609 400 aa16.78■□□□□ 0.28
ITGB1-210ENST00000474568 STC2O76061 302 aa16.78■□□□□ 0.28
ITGB1-210ENST00000474568 EEF1GP26641 437 aaKnown RBP16.78■□□□□ 0.28
ITGB1-210ENST00000474568 DAOAP59103 153 aa16.78■□□□□ 0.28
ITGB1-210ENST00000474568 DMWDQ09019 674 aa16.78■□□□□ 0.28
ITGB1-210ENST00000474568 MESP2Q0VG99 397 aa16.78■□□□□ 0.28
ITGB1-210ENST00000474568 HEATR6Q6AI08 1181 aaKnown RBP16.78■□□□□ 0.28
ITGB1-210ENST00000474568 PM20D1Q6GTS8 502 aa16.78■□□□□ 0.28
ITGB1-210ENST00000474568 CAVIN1Q6NZI2 390 aaKnown RBP16.78■□□□□ 0.28
ITGB1-210ENST00000474568 KLHDC10Q6PID8 442 aa16.78■□□□□ 0.28
ITGB1-210ENST00000474568 TPGS1Q6ZTW0 290 aa16.78■□□□□ 0.28
ITGB1-210ENST00000474568 HTR3DQ70Z44 454 aa16.78■□□□□ 0.28
ITGB1-210ENST00000474568 ASCL5Q7RTU5 278 aa16.78■□□□□ 0.28
ITGB1-210ENST00000474568 TMEM25Q86YD3 366 aa16.78■□□□□ 0.28
ITGB1-210ENST00000474568 SFTPA1Q8IWL2 248 aa16.78■□□□□ 0.28
ITGB1-210ENST00000474568 BHMTQ93088 406 aa16.78■□□□□ 0.28
ITGB1-210ENST00000474568 NKD2Q969F2 451 aaPredicted RBP16.78■□□□□ 0.28
ITGB1-210ENST00000474568 EXOC4Q96A65 974 aa16.78■□□□□ 0.28
ITGB1-210ENST00000474568 IER2Q9BTL4 223 aa16.78■□□□□ 0.28
ITGB1-210ENST00000474568 MARCH2Q9P0N8 246 aa16.78■□□□□ 0.28
ITGB1-210ENST00000474568 HELZP42694 1942 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms