RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 IL37Q9NZH6 218 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 TRIM10Q9UDY6 481 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 CHORDC1Q9UHD1 332 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-206ENST00000474564 TMEM59LQ9UK28 342 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 TFR2Q9UP52 801 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 PCDHGC5Q9Y5F6 944 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 TSC2P49815 1807 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 YJEFN3A6XGL0 299 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 E7ENQ6 273 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 M0QYT0 321 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 BUB1BO60566 1050 aaPredicted RBP10.81□□□□□ -0.68
COL12A1-206ENST00000474564 MYL4P12829 197 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 HOXB8P17481 243 aaPredicted RBP10.81□□□□□ -0.68
COL12A1-206ENST00000474564 PFKLP17858 780 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 ATF6P18850 670 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 IGFBP4P22692 258 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 GPR15P49685 360 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 AIF1P55008 147 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 RPL7AP62424 266 aaKnown RBP10.81□□□□□ -0.68
COL12A1-206ENST00000474564 DEUP1Q05D60 604 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 CAMK1Q14012 370 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 BOLA3Q53S33 107 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 C10orf120Q5SQS8 335 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 PPP1R15BQ5SWA1 713 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 HECTD3Q5T447 861 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 ACBD5Q5T8D3 534 aaPredicted RBP10.81□□□□□ -0.68
COL12A1-206ENST00000474564 CES5AQ6NT32 575 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 LLGL2Q6P1M3 1020 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 CC2D1AQ6P1N0 951 aaPredicted RBP10.81□□□□□ -0.68
COL12A1-206ENST00000474564 SCYL2Q6P3W7 929 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 PDZD4Q76G19 769 aaPredicted RBP10.81□□□□□ -0.68
COL12A1-206ENST00000474564 STRADAQ7RTN6 431 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 GPRIN1Q7Z2K8 1008 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 MAP7D3Q8IWC1 876 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 ZNF276Q8N554 614 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 NIPA2Q8N8Q9 360 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 SLC22A17Q8WUG5 538 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 SERPINB11Q96P15 392 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 CORO1BQ9BR76 489 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 PRKD2Q9BZL6 878 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 DDX56Q9NY93 547 aaKnown RBP10.81□□□□□ -0.68
COL12A1-206ENST00000474564 GMIPQ9P107 970 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 HCFC2Q9Y5Z7 792 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 ALG6Q9Y672 507 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 NLRC5Q86WI3 1866 aa10.81□□□□□ -0.68
COL12A1-206ENST00000474564 KIAA1671Q9BY89 1806 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 CCDC195A0A1B0GUA6 201 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 A0A1W2PQH9 124 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 FAM92AA1XBS5 289 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 C2CD4BA6NLJ0 364 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 SOBPA7XYQ1 873 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 DPYSL4O14531 572 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 CCL16O15467 120 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 VNN2O95498 520 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 POU2F2P09086 479 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 RARGP13631 454 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 EPCAMP16422 314 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 TCP1P17987 556 aaKnown RBP10.8□□□□□ -0.68
COL12A1-206ENST00000474564 COMTP21964 271 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 DDX6P26196 483 aaKnown RBP eCLIP10.8□□□□□ -0.68
COL12A1-206ENST00000474564 RDXP35241 583 aaKnown RBP10.8□□□□□ -0.68
COL12A1-206ENST00000474564 PCK1P35558 622 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 TUBP50607 506 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 COG7P83436 770 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 ATP11AP98196 1134 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 MTMR3Q13615 1198 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 CDO1Q16878 200 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 LRRC38Q5VT99 294 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 EP400NLQ6ZTU2 488 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 SPRED2Q7Z698 418 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 EMC1Q8N766 993 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 EFHBQ8N7U6 833 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 JOSD2Q8TAC2 188 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 CLEC4CQ8WTT0 213 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 FAM172AQ8WUF8 416 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 EDEM1Q92611 657 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 CFAP57Q96MR6 1250 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 SLC2A13Q96QE2 648 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 CRISPLD1Q9H336 500 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 ATXN3LQ9H3M9 355 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 WDCPQ9H6R7 721 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 TMEM30AQ9NV96 361 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 DDIT4Q9NX09 232 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.8□□□□□ -0.68
COL12A1-206ENST00000474564 TJP2Q9UDY2 1190 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 DNMT3LQ9UJW3 386 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 COG5Q9UP83 839 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 CLUHO75153 1309 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 VWA8A3KMH1 1905 aa10.8□□□□□ -0.68
COL12A1-206ENST00000474564 A0A0U1RQJ8 604 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 TCRBV5S1A1TA0A578 114 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 GRID2IPA4D2P6 1211 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 RFXAPO00287 272 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 PSTPIP1O43586 416 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 TLR5O60602 858 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 TRUB2O95900 331 aaKnown RBP10.79□□□□□ -0.68
COL12A1-206ENST00000474564 APOEP02649 317 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 GABRR2P28476 465 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 CCR1P32246 355 aa10.79□□□□□ -0.68
COL12A1-206ENST00000474564 FLT3P36888 993 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms