RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 UBA6A0AVT1 1052 aaPredicted RBP4.78□□□□□ -1.64
CCNL1-215ENST00000474539 NFIBO00712 420 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 C2CD2LO14523 706 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 HS6ST1O60243 411 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 SRGAP2O75044 1071 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 DCTN3O75935 186 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 DARSP14868 501 aaKnown RBP4.78□□□□□ -1.64
CCNL1-215ENST00000474539 EPHB2P29323 1055 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 DYNLT1P63172 113 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 SLC12A1Q13621 1099 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 SLC18A3Q16572 532 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 KBTBD12Q3ZCT8 623 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 ZNF394Q53GI3 561 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 GPAT2Q6NUI2 795 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 ZCCHC8Q6NZY4 707 aaKnown RBP4.78□□□□□ -1.64
CCNL1-215ENST00000474539 CXCL17Q6UXB2 119 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 TRMT10CQ7L0Y3 403 aaKnown RBP4.78□□□□□ -1.64
CCNL1-215ENST00000474539 ZNF720Q7Z2F6 126 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 MON1AQ86VX9 555 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 PSTKQ8IV42 348 aaKnown RBP4.78□□□□□ -1.64
CCNL1-215ENST00000474539 SLC9A9Q8IVB4 645 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 FMR1NBQ8N0W7 255 aaPredicted RBP4.78□□□□□ -1.64
CCNL1-215ENST00000474539 VGLL2Q8N8G2 317 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 ZNF507Q8TCN5 953 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 OVCA2Q8WZ82 227 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 SLC2A11Q9BYW1 496 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 CDH19Q9H159 772 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 ATP13A3Q9H7F0 1226 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 POPDC2Q9HBU9 364 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 ZFP14Q9HCL3 533 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 CNGB3Q9NQW8 809 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 PHPT1Q9NRX4 125 aaPredicted RBP4.78□□□□□ -1.64
CCNL1-215ENST00000474539 TXLNGQ9NUQ3 528 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 FAM105AQ9NUU6 356 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 UBA2Q9UBT2 640 aaPredicted RBP4.78□□□□□ -1.64
CCNL1-215ENST00000474539 ZNF112Q9UJU3 913 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 FBXO10Q9UK96 956 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 APPL1Q9UKG1 709 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 L3MBTL1Q9Y468 752 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 HEY1Q9Y5J3 304 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 SNTNA6NMZ2 147 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 SLCO1B7G3V0H7 640 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 IRAK2O43187 625 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 ENTPD5O75356 428 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 FAM107AO95990 144 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 PDGFRBP09619 1106 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 ALOX15P16050 662 aaPredicted RBP4.78□□□□□ -1.64
CCNL1-215ENST00000474539 NOS2P35228 1153 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 MAGEA9P43362 315 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 ACLYP53396 1101 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 CDH8P55286 799 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 RBL2Q08999 1139 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 ART3Q13508 389 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 NAB2Q15742 525 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 NFIL3Q16649 462 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 NDUFA9Q16795 377 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 SPDYE7PQ495Y7 208 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 HSP90AA5PQ58FG0 334 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 ARMC12Q5T9G4 340 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 AGAP9Q5VTM2 703 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 PALB2Q86YC2 1186 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 PTPRN2Q92932 1015 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 SENP8Q96LD8 212 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 MTMR9Q96QG7 549 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 ERGIC2Q96RQ1 377 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 RBBP8Q99708 897 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 AVENQ9NQS1 362 aaPredicted RBP4.78□□□□□ -1.64
CCNL1-215ENST00000474539 PRDM10Q9NQV6 1147 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 SLC2A4RGQ9NR83 387 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 TRAF3IP3Q9Y228 551 aa4.78□□□□□ -1.64
CCNL1-215ENST00000474539 KRT87PA6NCN2 255 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 PRR5-ARHGAP8B1AHC4 643 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 TM9SF1O15321 606 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 RASA4O43374 803 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 TBC1D4O60343 1298 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 AVILO75366 819 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 CSPG5O95196 566 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 KRT14P02533 472 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 FTH1P02794 183 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 RBP1P09455 135 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 FGRP09769 529 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 ZNF286BP0CG31 522 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 SAT1P21673 171 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 NDUFS1P28331 727 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 LSP1P33241 339 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 PNLIPRP1P54315 467 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 GJA9P57773 515 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 NCALDP61601 193 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 YWHAZP63104 245 aaKnown RBP4.77□□□□□ -1.65
CCNL1-215ENST00000474539 CDK16Q00536 496 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 OCRLQ01968 901 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 LBRQ14739 615 aaKnown RBP4.77□□□□□ -1.65
CCNL1-215ENST00000474539 PLCL1Q15111 1095 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 KCNA10Q16322 511 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 FAM83EQ2M2I3 478 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 RALGPS1Q5JS13 557 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 GJC2Q5T442 439 aaPredicted RBP4.77□□□□□ -1.65
CCNL1-215ENST00000474539 MARC1Q5VT66 337 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 ARMC3Q5W041 872 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 SLC30A10Q6XR72 485 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms