RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 ZNF276Q8N554 614 aa19.57■□□□□ 0.72
COL7A1-209ENST00000474432 P2RY11Q96G91 374 aa19.57■□□□□ 0.72
COL7A1-209ENST00000474432 DHTKD1Q96HY7 919 aaPredicted RBP19.57■□□□□ 0.72
COL7A1-209ENST00000474432 ZC3H10Q96K80 434 aaKnown RBP19.57■□□□□ 0.72
COL7A1-209ENST00000474432 FAM124BQ9H5Z6 455 aaPredicted RBP19.57■□□□□ 0.72
COL7A1-209ENST00000474432 SPHK2Q9NRA0 654 aa19.57■□□□□ 0.72
COL7A1-209ENST00000474432 SEMA4GQ9NTN9 838 aa19.57■□□□□ 0.72
COL7A1-209ENST00000474432 ARMCX3Q9UH62 379 aaPredicted RBP19.57■□□□□ 0.72
COL7A1-209ENST00000474432 HCN2Q9UL51 889 aa19.57■□□□□ 0.72
COL7A1-209ENST00000474432 MMP17Q9ULZ9 603 aa19.57■□□□□ 0.72
COL7A1-209ENST00000474432 ABCA7Q8IZY2 2146 aa19.57■□□□□ 0.72
COL7A1-209ENST00000474432 NCOR2Q9Y618 2525 aa19.56■□□□□ 0.72
COL7A1-209ENST00000474432 TRIM24O15164 1050 aa19.56■□□□□ 0.72
COL7A1-209ENST00000474432 APBB3O95704 486 aa19.56■□□□□ 0.72
COL7A1-209ENST00000474432 ATP5C1P36542 298 aaKnown RBP19.56■□□□□ 0.72
COL7A1-209ENST00000474432 MRPS21P82921 87 aaKnown RBP19.56■□□□□ 0.72
COL7A1-209ENST00000474432 LMNB2Q03252 620 aa19.56■□□□□ 0.72
COL7A1-209ENST00000474432 GAD2Q05329 585 aa19.56■□□□□ 0.72
COL7A1-209ENST00000474432 CUL2Q13617 745 aa19.56■□□□□ 0.72
COL7A1-209ENST00000474432 CSRP2Q16527 193 aa19.56■□□□□ 0.72
COL7A1-209ENST00000474432 RAB41Q5JT25 222 aa19.56■□□□□ 0.72
COL7A1-209ENST00000474432 TMEM92Q6UXU6 159 aa19.56■□□□□ 0.72
COL7A1-209ENST00000474432 CACNA2D4Q7Z3S7 1137 aa19.56■□□□□ 0.72
COL7A1-209ENST00000474432 RASSF3Q86WH2 238 aa19.56■□□□□ 0.72
COL7A1-209ENST00000474432 TTC30AQ86WT1 665 aa19.56■□□□□ 0.72
COL7A1-209ENST00000474432 TTC39CQ8N584 583 aa19.56■□□□□ 0.72
COL7A1-209ENST00000474432 CCDC33Q8N5R6 958 aa19.56■□□□□ 0.72
COL7A1-209ENST00000474432 IL17RCQ8NAC3 791 aa19.56■□□□□ 0.72
COL7A1-209ENST00000474432 GTPBP4Q9BZE4 634 aaKnown RBP19.56■□□□□ 0.72
COL7A1-209ENST00000474432 UBXN6Q9BZV1 441 aa19.56■□□□□ 0.72
COL7A1-209ENST00000474432 SPTBN2O15020 2390 aa19.56■□□□□ 0.72
COL7A1-209ENST00000474432 PRR5-ARHGAP8B1AHC4 643 aa19.55■□□□□ 0.72
COL7A1-209ENST00000474432 TULP2O00295 520 aa19.55■□□□□ 0.72
COL7A1-209ENST00000474432 DCLK1O15075 740 aa19.55■□□□□ 0.72
COL7A1-209ENST00000474432 TULP3O75386 442 aa19.55■□□□□ 0.72
COL7A1-209ENST00000474432 TRIM21P19474 475 aaKnown RBP19.55■□□□□ 0.72
COL7A1-209ENST00000474432 GRIA2P42262 883 aa19.55■□□□□ 0.72
COL7A1-209ENST00000474432 ATXN1P54253 815 aaKnown RBP19.55■□□□□ 0.72
COL7A1-209ENST00000474432 ARHGAP8P85298 464 aa19.55■□□□□ 0.72
COL7A1-209ENST00000474432 KDSRQ06136 332 aa19.55■□□□□ 0.72
COL7A1-209ENST00000474432 MORC3Q14149 939 aa19.55■□□□□ 0.72
COL7A1-209ENST00000474432 Q6ZNB5 142 aa19.55■□□□□ 0.72
COL7A1-209ENST00000474432 BHLHA9Q7RTU4 235 aa19.55■□□□□ 0.72
COL7A1-209ENST00000474432 PIGZQ86VD9 579 aa19.55■□□□□ 0.72
COL7A1-209ENST00000474432 ALLCQ8N6M5 410 aa19.55■□□□□ 0.72
COL7A1-209ENST00000474432 NAT16Q8N8M0 369 aa19.55■□□□□ 0.72
COL7A1-209ENST00000474432 ANKRD52Q8NB46 1076 aa19.55■□□□□ 0.72
COL7A1-209ENST00000474432 LOXL4Q96JB6 756 aa19.55■□□□□ 0.72
COL7A1-209ENST00000474432 NACA2Q9H009 215 aa19.55■□□□□ 0.72
COL7A1-209ENST00000474432 DUSP15Q9H1R2 295 aaPredicted RBP19.55■□□□□ 0.72
COL7A1-209ENST00000474432 ZDHHC4Q9NPG8 344 aa19.55■□□□□ 0.72
COL7A1-209ENST00000474432 ARHGEF4Q9NR80 690 aa19.55■□□□□ 0.72
COL7A1-209ENST00000474432 MED19A0JLT2 244 aaPredicted RBP19.54■□□□□ 0.72
COL7A1-209ENST00000474432 SGK1O00141 431 aa19.54■□□□□ 0.72
COL7A1-209ENST00000474432 PSMA7O14818 248 aa19.54■□□□□ 0.72
COL7A1-209ENST00000474432 ADAM23O75077 832 aa19.54■□□□□ 0.72
COL7A1-209ENST00000474432 EPN2O95208 641 aa19.54■□□□□ 0.72
COL7A1-209ENST00000474432 KLKB1P03952 638 aa19.54■□□□□ 0.72
COL7A1-209ENST00000474432 APODP05090 189 aa19.54■□□□□ 0.72
COL7A1-209ENST00000474432 TNFRSF4P43489 277 aa19.54■□□□□ 0.72
COL7A1-209ENST00000474432 FMO5P49326 533 aa19.54■□□□□ 0.72
COL7A1-209ENST00000474432 CRY1Q16526 586 aa19.54■□□□□ 0.72
COL7A1-209ENST00000474432 PLK5Q496M5 336 aa19.54■□□□□ 0.72
COL7A1-209ENST00000474432 PRR23CQ6ZRP0 262 aa19.54■□□□□ 0.72
COL7A1-209ENST00000474432 DGLUCYQ7Z3D6 616 aa19.54■□□□□ 0.72
COL7A1-209ENST00000474432 CCDC26Q8TAB7 109 aa19.54■□□□□ 0.72
COL7A1-209ENST00000474432 LMO3Q8TAP4 145 aa19.54■□□□□ 0.72
COL7A1-209ENST00000474432 CEP63Q96MT8 703 aa19.54■□□□□ 0.72
COL7A1-209ENST00000474432 CLIC5Q9NZA1 410 aa19.54■□□□□ 0.72
COL7A1-209ENST00000474432 HOOK1Q9UJC3 728 aaKnown RBP19.54■□□□□ 0.72
COL7A1-209ENST00000474432 NAGPAQ9UK23 515 aa19.54■□□□□ 0.72
COL7A1-209ENST00000474432 PMM2O15305 246 aa19.53■□□□□ 0.72
COL7A1-209ENST00000474432 GDF9O60383 454 aa19.53■□□□□ 0.72
COL7A1-209ENST00000474432 STC2O76061 302 aa19.53■□□□□ 0.72
COL7A1-209ENST00000474432 CCDC192P0DO97 292 aa19.53■□□□□ 0.72
COL7A1-209ENST00000474432 TIE1P35590 1138 aa19.53■□□□□ 0.72
COL7A1-209ENST00000474432 PLA2G4AP47712 749 aa19.53■□□□□ 0.72
COL7A1-209ENST00000474432 LRMPQ12912 555 aa19.53■□□□□ 0.72
COL7A1-209ENST00000474432 C10orf120Q5SQS8 335 aa19.53■□□□□ 0.72
COL7A1-209ENST00000474432 FOXR2Q6PJQ5 311 aa19.53■□□□□ 0.72
COL7A1-209ENST00000474432 TXNDC5Q8NBS9 432 aaKnown RBP19.53■□□□□ 0.72
COL7A1-209ENST00000474432 TSTD1Q8NFU3 115 aa19.53■□□□□ 0.72
COL7A1-209ENST00000474432 ARRDC1-AS1Q9H2J1 176 aa19.53■□□□□ 0.72
COL7A1-209ENST00000474432 METTL14Q9HCE5 456 aaKnown RBP19.53■□□□□ 0.72
COL7A1-209ENST00000474432 MARK1Q9P0L2 795 aa19.53■□□□□ 0.72
COL7A1-209ENST00000474432 DNMT3LQ9UJW3 386 aa19.53■□□□□ 0.72
COL7A1-209ENST00000474432 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.52■□□□□ 0.72
COL7A1-209ENST00000474432 GABBR2O75899 941 aa19.52■□□□□ 0.72
COL7A1-209ENST00000474432 KLF8O95600 359 aaPredicted RBP19.52■□□□□ 0.72
COL7A1-209ENST00000474432 PSEN1P49768 467 aa19.52■□□□□ 0.72
COL7A1-209ENST00000474432 DGKEP52429 567 aa19.52■□□□□ 0.72
COL7A1-209ENST00000474432 PDE4CQ08493 712 aa19.52■□□□□ 0.72
COL7A1-209ENST00000474432 CCDC6Q16204 474 aa19.52■□□□□ 0.72
COL7A1-209ENST00000474432 ANO4Q32M45 955 aa19.52■□□□□ 0.72
COL7A1-209ENST00000474432 PKDCCQ504Y2 493 aa19.52■□□□□ 0.72
COL7A1-209ENST00000474432 PLA2G2CQ5R387 149 aa19.52■□□□□ 0.72
COL7A1-209ENST00000474432 PM20D1Q6GTS8 502 aa19.52■□□□□ 0.72
COL7A1-209ENST00000474432 KLHL10Q6JEL2 608 aa19.52■□□□□ 0.72
COL7A1-209ENST00000474432 MIB1Q86YT6 1006 aa19.52■□□□□ 0.72
COL7A1-209ENST00000474432 TERB1Q8NA31 727 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms