RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 PCDHGA11Q9Y5H2 935 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 NPATQ14207 1427 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 MTUS2Q5JR59 1369 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 B8ZZF3 427 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 HIP1O00291 1037 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 FPGTO14772 594 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 EFCAB14O75071 495 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 SLU7O95391 586 aaKnown RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 MLYCDO95822 493 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 NFICP08651 508 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 FAM153BP0C7A2 387 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 MYCLP12524 364 aaPredicted RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 ITGA2P17301 1181 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 CPN2P22792 545 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 GLRA2P23416 452 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 STAT5AP42229 794 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 PTGER3P43115 390 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 HIRAP54198 1017 aaPredicted RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 PCBP2Q15366 365 aaKnown RBP eCLIP3.63□□□□□ -1.83
UBR3-208ENST00000474426 CYTH1Q15438 398 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 MCMDC2Q4G0Z9 681 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 DAB2IPQ5VWQ8 1189 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 RNF219Q5W0B1 726 aaPredicted RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 CES4AQ5XG92 561 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 PRPF40BQ6NWY9 871 aaKnown RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 PKN3Q6P5Z2 889 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 TLK2Q86UE8 772 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 NUDT13Q86X67 352 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 PIGOQ8TEQ8 1089 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 IP6K1Q92551 441 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 TMX3Q96JJ7 454 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 VPS35Q96QK1 796 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 OR1F2PQ96R84 312 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 CRNKL1Q9BZJ0 848 aaKnown RBP3.63□□□□□ -1.83
UBR3-208ENST00000474426 BCL2L14Q9BZR8 327 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 TMOD3Q9NYL9 352 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 RCAN3Q9UKA8 241 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 FAM169AQ9Y6X4 670 aa3.63□□□□□ -1.83
UBR3-208ENST00000474426 RFX7Q2KHR2 1363 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 LOC390937A0A1W2PQ73 354 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 hCG_1807616A0A1W2PRN6 198 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 MACROD2A1Z1Q3 448 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 DPPA5A6NC42 116 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 FADS2P1A8MWK0 482 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 PSMD11O00231 422 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 LDLRAD4O15165 306 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 ULK1O75385 1050 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 PDE8BO95263 885 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 IFNAR1P17181 557 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 PFKLP17858 780 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 SLC8A1P32418 973 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 SHMT1P34896 483 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 RAB14P61106 215 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 KRT76Q01546 638 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 PTK2Q05397 1052 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 CLN3Q13286 438 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 PPIL2Q13356 520 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 GTF2H3Q13889 308 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 SPIDRQ14159 915 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 PCBP1Q15365 356 aaKnown RBP eCLIP3.62□□□□□ -1.83
UBR3-208ENST00000474426 ACCSLQ4AC99 568 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 GTDC1Q4AE62 458 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 KCTD21Q4G0X4 260 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 ZNF805Q5CZA5 627 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 RRAGBQ5VZM2 374 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 SUSD1Q6UWL2 747 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 RFX8Q6ZV50 586 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 ZNF765Q7L2R6 523 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 KRT28Q7Z3Y7 464 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 SFRP1Q8N474 314 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 HTRA1Q92743 480 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 RMDN1Q96DB5 314 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 MASTLQ96GX5 879 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 KCNK17Q96T54 332 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 CDRT15Q96T59 188 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 RIT2Q99578 217 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 TM9SF2Q99805 663 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 SORBS1Q9BX66 1292 aaKnown RBP3.62□□□□□ -1.83
UBR3-208ENST00000474426 ZMAT3Q9HA38 289 aaKnown RBP3.62□□□□□ -1.83
UBR3-208ENST00000474426 ARMC1Q9NVT9 282 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 GGA2Q9UJY4 613 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 AGAP1Q9UPQ3 857 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 A0A088AWK7 358 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 FUOMA2VDF0 154 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 A4D1N5 150 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 PI4KAP2A4QPH2 592 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 B2RBV5 119 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 TMEM114B3SHH9 223 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 ERVV-1B6SEH8 477 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 BTN3A1O00481 513 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 GATCO43716 136 aaKnown RBP3.62□□□□□ -1.83
UBR3-208ENST00000474426 SYNCRIPO60506 623 aaKnown RBP3.62□□□□□ -1.83
UBR3-208ENST00000474426 PTP4A3O75365 173 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 GPX5O75715 221 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 SNAPINO95295 136 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 GJB6O95452 261 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 CRTAMO95727 393 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 GAS8O95995 478 aa3.62□□□□□ -1.83
UBR3-208ENST00000474426 CHRM5P08912 532 aaPredicted RBP3.62□□□□□ -1.83
UBR3-208ENST00000474426 PAMP19021 973 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms