RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 SLC13A2Q13183 592 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 IFIT5Q13325 482 aaKnown RBP4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 MIDNQ504T8 468 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 C3orf38Q5JPI3 329 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 C10orf25Q5T742 122 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 KIAA1161Q6NSJ0 714 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 ZNF813Q6ZN06 617 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 SRLQ86TD4 932 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 MORC1Q86VD1 984 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 MICU3Q86XE3 530 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 IZUMO1Q8IYV9 350 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 ABRAQ8N0Z2 381 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 ACRBPQ8NEB7 543 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 ADAMTS18Q8TE60 1221 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 PIGOQ8TEQ8 1089 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 NMD3Q96D46 503 aaKnown RBP4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 SUCLG2Q96I99 432 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 SACM1LQ9NTJ5 587 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 TFCP2L1Q9NZI6 479 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 TMX2Q9Y320 296 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 A0A087WWL8 130 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 CD8B2A6NJW9 211 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 TMEM233B4DJY2 109 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 TMEM232C9JQI7 657 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 CES2O00748 559 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 A1BGP04217 495 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 RPL17P18621 184 aaKnown RBP4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 HTR3AP46098 478 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 HTRA4P83105 476 aaPredicted RBP4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 KRT17Q04695 432 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 CTBP1Q13363 440 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 BIRC2Q13490 618 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 LEXMQ3ZCV2 418 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 LIX1LQ8IVB5 337 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 SPICE1Q8N0Z3 855 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 OR2C3Q8N628 320 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 SLC15A4Q8N697 577 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 RNF152Q8N8N0 203 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 ZNF548Q8NEK5 533 aaPredicted RBP4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 OSR1Q8TAX0 266 aaPredicted RBP4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 CUL5Q93034 780 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 SGCZQ96LD1 299 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 CCDC17Q96LX7 622 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 MOGAT1Q96PD6 335 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 C17orf80Q9BSJ5 609 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 UNKQ9C0B0 810 aaKnown RBP4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 GBA2Q9HCG7 927 aaPredicted RBP4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 TAGLN3Q9UI15 199 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 AMFRQ9UKV5 643 aa4.31□□□□□ -1.72
TMEM50B-208ENST00000474272 POM121BA6NF01 834 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 FOXN3O00409 490 aaPredicted RBP4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 NCK2O43639 380 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 TBC1D4O60343 1298 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 FGAP02671 866 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 PRKCBP05771 671 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 THP07101 528 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 TMEM191BP0C7N4 346 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 IL1R1P14778 569 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 ZKSCAN1P17029 563 aaPredicted RBP4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 KCNA3P22001 575 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 TNFSF4P23510 183 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 LRPAP1P30533 357 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 DGKEP52429 567 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 COPB1P53618 953 aaKnown RBP4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 NANOS2P60321 138 aaKnown RBP4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 DAG1Q14118 895 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 SEC23BQ15437 767 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 PTCHD3Q3KNS1 767 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 LMBRD2Q68DH5 695 aaPredicted RBP4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 TOGARAM2Q6ZUX3 1019 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 DNAJC5GQ8N7S2 189 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 OR56A3Q8NH54 315 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 MAP4K1Q92918 833 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 PPP2R3CQ969Q6 453 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 TNIP3Q96KP6 325 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 CCDC138Q96M89 665 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 RIPOR3Q96MK2 946 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 SIGLEC11Q96RL6 698 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 MYD88Q99836 296 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 MESP1Q9BRJ9 268 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 ZNF518BQ9C0D4 1074 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 PNPLA8Q9NP80 782 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 NLRC4Q9NPP4 1024 aa4.3□□□□□ -1.72
TMEM50B-208ENST00000474272 H3BNX3 289 aa4.29□□□□□ -1.72
TMEM50B-208ENST00000474272 MYO1CO00159 1063 aa4.29□□□□□ -1.72
TMEM50B-208ENST00000474272 IL18RAPO95256 599 aa4.29□□□□□ -1.72
TMEM50B-208ENST00000474272 MYCLP12524 364 aaPredicted RBP4.29□□□□□ -1.72
TMEM50B-208ENST00000474272 STT3AP46977 705 aa4.29□□□□□ -1.72
TMEM50B-208ENST00000474272 HTR6P50406 440 aa4.29□□□□□ -1.72
TMEM50B-208ENST00000474272 PRKAG1P54619 331 aa4.29□□□□□ -1.72
TMEM50B-208ENST00000474272 RAB32Q13637 225 aa4.29□□□□□ -1.72
TMEM50B-208ENST00000474272 KLHDC7AQ5VTJ3 777 aa4.29□□□□□ -1.72
TMEM50B-208ENST00000474272 DCAF12L1Q5VU92 463 aa4.29□□□□□ -1.72
TMEM50B-208ENST00000474272 MTHFD1LQ6UB35 978 aa4.29□□□□□ -1.72
TMEM50B-208ENST00000474272 FAM186BQ8IYM0 893 aa4.29□□□□□ -1.72
TMEM50B-208ENST00000474272 MPP5Q8N3R9 675 aa4.29□□□□□ -1.72
TMEM50B-208ENST00000474272 SIRT6Q8N6T7 355 aa4.29□□□□□ -1.72
TMEM50B-208ENST00000474272 PNISRQ8TF01 805 aaKnown RBP4.29□□□□□ -1.72
TMEM50B-208ENST00000474272 RAPGEF4Q8WZA2 1011 aa4.29□□□□□ -1.72
TMEM50B-208ENST00000474272 MARK4Q96L34 752 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms