RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 HOXC11O43248 304 aaPredicted RBP21.53■■□□□ 1.04
SNX13-206ENST00000474067 FOXD2O60548 495 aaPredicted RBP21.53■■□□□ 1.04
SNX13-206ENST00000474067 CT47A1Q5JQC4 288 aaPredicted RBP21.53■■□□□ 1.04
SNX13-206ENST00000474067 RAB41Q5JT25 222 aa21.53■■□□□ 1.04
SNX13-206ENST00000474067 LAIR1Q6GTX8 287 aa21.53■■□□□ 1.04
SNX13-206ENST00000474067 GPRIN1Q7Z2K8 1008 aa21.53■■□□□ 1.04
SNX13-206ENST00000474067 TRMT11Q7Z4G4 463 aaKnown RBP21.53■■□□□ 1.04
SNX13-206ENST00000474067 PIGZQ86VD9 579 aa21.53■■□□□ 1.04
SNX13-206ENST00000474067 SIX6OS1Q8N1H7 587 aa21.53■■□□□ 1.04
SNX13-206ENST00000474067 SUMF1Q8NBK3 374 aa21.53■■□□□ 1.04
SNX13-206ENST00000474067 EHBP1Q8NDI1 1231 aa21.53■■□□□ 1.04
SNX13-206ENST00000474067 KCNV2Q8TDN2 545 aa21.53■■□□□ 1.04
SNX13-206ENST00000474067 GOLGA1Q92805 767 aa21.53■■□□□ 1.04
SNX13-206ENST00000474067 ZFRQ96KR1 1074 aaKnown RBP21.53■■□□□ 1.04
SNX13-206ENST00000474067 KLF16Q9BXK1 252 aaPredicted RBP21.53■■□□□ 1.04
SNX13-206ENST00000474067 NUP62CLQ9H1M0 184 aa21.53■■□□□ 1.04
SNX13-206ENST00000474067 K7ESF4 209 aa21.52■■□□□ 1.04
SNX13-206ENST00000474067 ZBED1O96006 694 aa21.52■■□□□ 1.04
SNX13-206ENST00000474067 IRF1P10914 325 aa21.52■■□□□ 1.04
SNX13-206ENST00000474067 SDHBP21912 280 aa21.52■■□□□ 1.04
SNX13-206ENST00000474067 CHKAP35790 457 aa21.52■■□□□ 1.04
SNX13-206ENST00000474067 GRIA2P42262 883 aa21.52■■□□□ 1.04
SNX13-206ENST00000474067 TKTL1P51854 596 aa21.52■■□□□ 1.04
SNX13-206ENST00000474067 SIM2Q14190 667 aaPredicted RBP21.52■■□□□ 1.04
SNX13-206ENST00000474067 CLEC17AQ6ZS10 378 aa21.52■■□□□ 1.04
SNX13-206ENST00000474067 CEP68Q76N32 757 aa21.52■■□□□ 1.04
SNX13-206ENST00000474067 C11orf74Q86VG3 221 aa21.52■■□□□ 1.04
SNX13-206ENST00000474067 RPLP0P6Q8NHW5 317 aa21.52■■□□□ 1.04
SNX13-206ENST00000474067 CLSTN2Q9H4D0 955 aa21.52■■□□□ 1.04
SNX13-206ENST00000474067 SPHK2Q9NRA0 654 aa21.52■■□□□ 1.04
SNX13-206ENST00000474067 DEC1Q9P2X7 70 aa21.52■■□□□ 1.04
SNX13-206ENST00000474067 MED7O43513 233 aa21.51■■□□□ 1.03
SNX13-206ENST00000474067 OPRD1P41143 372 aa21.51■■□□□ 1.03
SNX13-206ENST00000474067 TNFRSF4P43489 277 aa21.51■■□□□ 1.03
SNX13-206ENST00000474067 MFAP3P55082 362 aa21.51■■□□□ 1.03
SNX13-206ENST00000474067 ANO4Q32M45 955 aa21.51■■□□□ 1.03
SNX13-206ENST00000474067 LY6G5CQ5SRR4 150 aa21.51■■□□□ 1.03
SNX13-206ENST00000474067 RHBDF2Q6PJF5 856 aa21.51■■□□□ 1.03
SNX13-206ENST00000474067 LCLAT1Q6UWP7 414 aa21.51■■□□□ 1.03
SNX13-206ENST00000474067 CREBRFQ8IUR6 639 aa21.51■■□□□ 1.03
SNX13-206ENST00000474067 SCML4Q8N228 414 aa21.51■■□□□ 1.03
SNX13-206ENST00000474067 RNF139Q8WU17 664 aa21.51■■□□□ 1.03
SNX13-206ENST00000474067 KCTD13Q8WZ19 329 aa21.51■■□□□ 1.03
SNX13-206ENST00000474067 TRIM62Q9BVG3 475 aa21.51■■□□□ 1.03
SNX13-206ENST00000474067 CNGB3Q9NQW8 809 aa21.51■■□□□ 1.03
SNX13-206ENST00000474067 ARHGEF4Q9NR80 690 aa21.51■■□□□ 1.03
SNX13-206ENST00000474067 O00370 1275 aa21.5■■□□□ 1.03
SNX13-206ENST00000474067 LRP3O75074 770 aa21.5■■□□□ 1.03
SNX13-206ENST00000474067 ALDH1A2O94788 518 aa21.5■■□□□ 1.03
SNX13-206ENST00000474067 KAT7O95251 611 aa21.5■■□□□ 1.03
SNX13-206ENST00000474067 APBB3O95704 486 aa21.5■■□□□ 1.03
SNX13-206ENST00000474067 ERCC5P28715 1186 aaPredicted RBP21.5■■□□□ 1.03
SNX13-206ENST00000474067 FNTBP49356 437 aa21.5■■□□□ 1.03
SNX13-206ENST00000474067 YWHAGP61981 247 aaKnown RBP eCLIP21.5■■□□□ 1.03
SNX13-206ENST00000474067 PDE4CQ08493 712 aa21.5■■□□□ 1.03
SNX13-206ENST00000474067 CNGA2Q16280 664 aa21.5■■□□□ 1.03
SNX13-206ENST00000474067 PM20D1Q6GTS8 502 aa21.5■■□□□ 1.03
SNX13-206ENST00000474067 PRR23BQ6ZRT6 265 aa21.5■■□□□ 1.03
SNX13-206ENST00000474067 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.5■■□□□ 1.03
SNX13-206ENST00000474067 BBS7Q8IWZ6 715 aa21.5■■□□□ 1.03
SNX13-206ENST00000474067 CNOT6LQ96LI5 555 aaKnown RBP21.5■■□□□ 1.03
SNX13-206ENST00000474067 NMUR1Q9HB89 426 aa21.5■■□□□ 1.03
SNX13-206ENST00000474067 GTPBP10A4D1E9 387 aaKnown RBP21.49■■□□□ 1.03
SNX13-206ENST00000474067 SART1O43290 800 aaKnown RBP21.49■■□□□ 1.03
SNX13-206ENST00000474067 CYBBP04839 570 aa21.49■■□□□ 1.03
SNX13-206ENST00000474067 MTIF2P46199 727 aaKnown RBP21.49■■□□□ 1.03
SNX13-206ENST00000474067 ZNF445P59923 1031 aa21.49■■□□□ 1.03
SNX13-206ENST00000474067 DMC1Q14565 340 aa21.49■■□□□ 1.03
SNX13-206ENST00000474067 MEA1Q16626 185 aa21.49■■□□□ 1.03
SNX13-206ENST00000474067 EOGTQ5NDL2 527 aa21.49■■□□□ 1.03
SNX13-206ENST00000474067 HEATR6Q6AI08 1181 aaKnown RBP21.49■■□□□ 1.03
SNX13-206ENST00000474067 GBP6Q6ZN66 633 aa21.49■■□□□ 1.03
SNX13-206ENST00000474067 TTC30AQ86WT1 665 aa21.49■■□□□ 1.03
SNX13-206ENST00000474067 MIB1Q86YT6 1006 aa21.49■■□□□ 1.03
SNX13-206ENST00000474067 UBR7Q8N806 425 aa21.49■■□□□ 1.03
SNX13-206ENST00000474067 RBBP8NLQ8NC74 664 aaPredicted RBP21.49■■□□□ 1.03
SNX13-206ENST00000474067 HSFY1Q96LI6 401 aa21.49■■□□□ 1.03
SNX13-206ENST00000474067 THAP9Q9H5L6 903 aa21.49■■□□□ 1.03
SNX13-206ENST00000474067 FBRSL1Q9HCM7 1045 aaKnown RBP21.49■■□□□ 1.03
SNX13-206ENST00000474067 ABCC13Q9NSE7 274 aa21.49■■□□□ 1.03
SNX13-206ENST00000474067 MARK1Q9P0L2 795 aa21.49■■□□□ 1.03
SNX13-206ENST00000474067 RASAL2Q9UJF2 1139 aa21.49■■□□□ 1.03
SNX13-206ENST00000474067 A0A0A0MRY4 1105 aa21.48■■□□□ 1.03
SNX13-206ENST00000474067 TBC1D3BA6NDS4 549 aa21.48■■□□□ 1.03
SNX13-206ENST00000474067 ZBTB24O43167 697 aaPredicted RBP21.48■■□□□ 1.03
SNX13-206ENST00000474067 FBXO21O94952 628 aa21.48■■□□□ 1.03
SNX13-206ENST00000474067 RETP07949 1114 aa21.48■■□□□ 1.03
SNX13-206ENST00000474067 DGKEP52429 567 aa21.48■■□□□ 1.03
SNX13-206ENST00000474067 TSTD1Q8NFU3 115 aa21.48■■□□□ 1.03
SNX13-206ENST00000474067 LMO3Q8TAP4 145 aa21.48■■□□□ 1.03
SNX13-206ENST00000474067 USP33Q8TEY7 942 aa21.48■■□□□ 1.03
SNX13-206ENST00000474067 GAB3Q8WWW8 586 aa21.48■■□□□ 1.03
SNX13-206ENST00000474067 IRGQQ8WZA9 623 aa21.48■■□□□ 1.03
SNX13-206ENST00000474067 PLD4Q96BZ4 506 aa21.48■■□□□ 1.03
SNX13-206ENST00000474067 BBS2Q9BXC9 721 aa21.48■■□□□ 1.03
SNX13-206ENST00000474067 INTS2Q9H0H0 1204 aaKnown RBP21.48■■□□□ 1.03
SNX13-206ENST00000474067 POLMQ9NP87 494 aaPredicted RBP21.48■■□□□ 1.03
SNX13-206ENST00000474067 MARCH2Q9P0N8 246 aa21.48■■□□□ 1.03
SNX13-206ENST00000474067 EBF1Q9UH73 591 aa21.48■■□□□ 1.03
SNX13-206ENST00000474067 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms