RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 CELF3Q5SZQ8 465 aaKnown RBP11.39□□□□□ -0.59
C9orf3-214ENST00000473778 CHSY1Q86X52 802 aa11.39□□□□□ -0.59
C9orf3-214ENST00000473778 WDR60Q8WVS4 1066 aa11.39□□□□□ -0.59
C9orf3-214ENST00000473778 KHSRPQ92945 711 aaKnown RBP eCLIP11.39□□□□□ -0.59
C9orf3-214ENST00000473778 ALKBH8Q96BT7 664 aaKnown RBP11.39□□□□□ -0.59
C9orf3-214ENST00000473778 FAF2Q96CS3 445 aa11.39□□□□□ -0.59
C9orf3-214ENST00000473778 NAF1Q96HR8 494 aaKnown RBP11.39□□□□□ -0.59
C9orf3-214ENST00000473778 HEXIM2Q96MH2 286 aaKnown RBP11.39□□□□□ -0.59
C9orf3-214ENST00000473778 RNF157Q96PX1 679 aa11.39□□□□□ -0.59
C9orf3-214ENST00000473778 SRPK1Q96SB4 655 aaKnown RBP11.39□□□□□ -0.59
C9orf3-214ENST00000473778 TRIM55Q9BYV6 548 aa11.39□□□□□ -0.59
C9orf3-214ENST00000473778 NMUR2Q9GZQ4 415 aa11.39□□□□□ -0.59
C9orf3-214ENST00000473778 TXNRD2Q9NNW7 524 aa11.39□□□□□ -0.59
C9orf3-214ENST00000473778 SAR1AQ9NR31 198 aa11.39□□□□□ -0.59
C9orf3-214ENST00000473778 WDR35Q9P2L0 1181 aa11.39□□□□□ -0.59
C9orf3-214ENST00000473778 LRRC42Q9Y546 428 aa11.39□□□□□ -0.59
C9orf3-214ENST00000473778 HEY1Q9Y5J3 304 aa11.39□□□□□ -0.59
C9orf3-214ENST00000473778 CITO14578 2027 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.38□□□□□ -0.59
C9orf3-214ENST00000473778 TRIM49D1C9J1S8 452 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 CNMDO75829 334 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 SMNDC1O75940 238 aaKnown RBP eCLIP11.38□□□□□ -0.59
C9orf3-214ENST00000473778 INHBAP08476 426 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 MYL2P10916 166 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 GPD1P21695 349 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 NDST1P52848 882 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 TMEM132AQ24JP5 1023 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 NOL9Q5SY16 702 aaKnown RBP11.38□□□□□ -0.59
C9orf3-214ENST00000473778 GJC2Q5T442 439 aaPredicted RBP11.38□□□□□ -0.59
C9orf3-214ENST00000473778 TRIM68Q6AZZ1 485 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 TRMT10BQ6PF06 316 aaKnown RBP11.38□□□□□ -0.59
C9orf3-214ENST00000473778 ZNF534Q76KX8 674 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 MPP5Q8N3R9 675 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 PPM1NQ8N819 430 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 PCDH19Q8TAB3 1148 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 NRG4Q8WWG1 115 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 FAM167AQ96KS9 214 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 PDGFCQ9NRA1 345 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 TAS2R1Q9NYW7 299 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 PPP1R1BQ9UD71 204 aaPredicted RBP11.38□□□□□ -0.59
C9orf3-214ENST00000473778 TSPAN16Q9UKR8 245 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 TNFSF13BQ9Y275 285 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 IQANK1A0A1B0GTG1 560 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 TTC36A6NLP5 189 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 H7C0C1 242 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 NDC80O14777 642 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 CHADO15335 359 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 GSC2O15499 205 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 RFPL1O75677 317 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 HAUS5O94927 633 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 CSH1P0DML2 217 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 CSH2P0DML3 217 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 STIP1P31948 543 aaKnown RBP11.38□□□□□ -0.59
C9orf3-214ENST00000473778 GRIA1P42261 906 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 ATP5OP48047 213 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 ARFIP2P53365 341 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 ATXN1P54253 815 aaKnown RBP11.38□□□□□ -0.59
C9orf3-214ENST00000473778 IGBP1P78318 339 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 CDK16Q00536 496 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 ACSBG2Q5FVE4 666 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 CCDC110Q8TBZ0 833 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 SPATA33Q96N06 139 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 LPIN3Q9BQK8 851 aa11.38□□□□□ -0.59
C9orf3-214ENST00000473778 NOP56O00567 594 aaKnown RBP11.37□□□□□ -0.59
C9orf3-214ENST00000473778 APRTP07741 180 aa11.37□□□□□ -0.59
C9orf3-214ENST00000473778 CPA2P48052 419 aa11.37□□□□□ -0.59
C9orf3-214ENST00000473778 RPS6KA3P51812 740 aa11.37□□□□□ -0.59
C9orf3-214ENST00000473778 SLC10A2Q12908 348 aaPredicted RBP11.37□□□□□ -0.59
C9orf3-214ENST00000473778 BLMHQ13867 455 aa11.37□□□□□ -0.59
C9orf3-214ENST00000473778 KPNB1Q14974 876 aaKnown RBP11.37□□□□□ -0.59
C9orf3-214ENST00000473778 Q3C1V9 767 aa11.37□□□□□ -0.59
C9orf3-214ENST00000473778 OR6B2Q6IFH4 312 aa11.37□□□□□ -0.59
C9orf3-214ENST00000473778 ANO7Q6IWH7 933 aa11.37□□□□□ -0.59
C9orf3-214ENST00000473778 PMF1Q6P1K2 205 aa11.37□□□□□ -0.59
C9orf3-214ENST00000473778 APBB1IPQ7Z5R6 666 aaPredicted RBP11.37□□□□□ -0.59
C9orf3-214ENST00000473778 TREML1Q86YW5 311 aa11.37□□□□□ -0.59
C9orf3-214ENST00000473778 APOBEC3FQ8IUX4 373 aaKnown RBP11.37□□□□□ -0.59
C9orf3-214ENST00000473778 CTAGE3PQ8IX95 158 aa11.37□□□□□ -0.59
C9orf3-214ENST00000473778 BTBD10Q9BSF8 475 aa11.37□□□□□ -0.59
C9orf3-214ENST00000473778 CNPY3Q9BT09 278 aa11.37□□□□□ -0.59
C9orf3-214ENST00000473778 B3GNT5Q9BYG0 378 aa11.37□□□□□ -0.59
C9orf3-214ENST00000473778 C2orf40Q9H1Z8 148 aa11.37□□□□□ -0.59
C9orf3-214ENST00000473778 PDZD7Q9H5P4 517 aa11.37□□□□□ -0.59
C9orf3-214ENST00000473778 ASNSD1Q9NWL6 643 aa11.37□□□□□ -0.59
C9orf3-214ENST00000473778 A0A087WZ62 844 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 CCDC195A0A1B0GUA6 201 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 SLC15A5A6NIM6 579 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 ENO4A6NNW6 628 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 HCRTO43612 131 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 DNAJC6O75061 913 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 KRT36O76013 467 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 C22orf31O95567 290 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 METTL18O95568 372 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 TSHRP16473 764 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 TUBP50607 506 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 RASSF2P50749 326 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 ACAP1Q15027 740 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 WASHC2DQ5SRD0 308 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 SCYL2Q6P3W7 929 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 CCDC62Q6P9F0 684 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms