RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 CTXN3Q4LDR2 81 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 HABP4Q5JVS0 413 aaKnown RBP15.46■□□□□ 0.07
LMNA-213ENST00000473598 ZNF280DQ6N043 979 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 OLFML1Q6UWY5 402 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 CPNE8Q86YQ8 564 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 RNF168Q8IYW5 571 aaPredicted RBP15.46■□□□□ 0.07
LMNA-213ENST00000473598 DCP1BQ8IZD4 617 aaKnown RBP15.46■□□□□ 0.07
LMNA-213ENST00000473598 JOSD2Q8TAC2 188 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 HDAC7Q8WUI4 952 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 RIN2Q8WYP3 895 aaPredicted RBP15.46■□□□□ 0.07
LMNA-213ENST00000473598 PBKQ96KB5 322 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 ZNF558Q96NG5 402 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 TTPALQ9BTX7 342 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 CENPHQ9H3R5 247 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 CSNK1G1Q9HCP0 422 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 DMGDHQ9UI17 866 aaKnown RBP15.46■□□□□ 0.07
LMNA-213ENST00000473598 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.46■□□□□ 0.07
LMNA-213ENST00000473598 CARNS1A5YM72 827 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 MIF4GDA9UHW6 222 aaKnown RBP15.46■□□□□ 0.07
LMNA-213ENST00000473598 KCNK3O14649 394 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 DDX3YO15523 660 aaKnown RBP15.46■□□□□ 0.07
LMNA-213ENST00000473598 SPOPO43791 374 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 FESP07332 822 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 OR4Q2P0C623 313 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 LAG3P18627 525 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 CACNA2D1P54289 1103 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 HTRA4P83105 476 aaPredicted RBP15.46■□□□□ 0.07
LMNA-213ENST00000473598 SLC6A3Q01959 620 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 OGDHQ02218 1023 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 GLE1Q53GS7 698 aaKnown RBP15.46■□□□□ 0.07
LMNA-213ENST00000473598 RTP2Q5QGT7 225 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 C4orf50Q6ZRC1 276 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 TAS1R1Q7RTX1 841 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 ZMIZ2Q8NF64 920 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.46■□□□□ 0.07
LMNA-213ENST00000473598 CD101Q93033 1021 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 PIWIL1Q96J94 861 aaKnown RBP15.46■□□□□ 0.07
LMNA-213ENST00000473598 KCNK16Q96T55 309 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 RHOBTB2Q9BYZ6 727 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 TMEM30AQ9NV96 361 aa15.46■□□□□ 0.07
LMNA-213ENST00000473598 EYSQ5T1H1 3165 aa15.45■□□□□ 0.06
LMNA-213ENST00000473598 OR6C75A6NL08 312 aa15.45■□□□□ 0.06
LMNA-213ENST00000473598 CA3P07451 260 aa15.45■□□□□ 0.06
LMNA-213ENST00000473598 LCP1P13796 627 aa15.45■□□□□ 0.06
LMNA-213ENST00000473598 BDNFP23560 247 aa15.45■□□□□ 0.06
LMNA-213ENST00000473598 MAN1A1P33908 653 aa15.45■□□□□ 0.06
LMNA-213ENST00000473598 ZNF252P-AS1Q0IIN9 211 aa15.45■□□□□ 0.06
LMNA-213ENST00000473598 SLC39A12Q504Y0 691 aa15.45■□□□□ 0.06
LMNA-213ENST00000473598 ANKS3Q6ZW76 656 aa15.45■□□□□ 0.06
LMNA-213ENST00000473598 SPATA2LQ8IUW3 424 aaPredicted RBP15.45■□□□□ 0.06
LMNA-213ENST00000473598 SLC39A11Q8N1S5 342 aa15.45■□□□□ 0.06
LMNA-213ENST00000473598 COLGALT1Q8NBJ5 622 aa15.45■□□□□ 0.06
LMNA-213ENST00000473598 FNIP1Q8TF40 1166 aa15.45■□□□□ 0.06
LMNA-213ENST00000473598 OXCT2Q9BYC2 517 aaPredicted RBP15.45■□□□□ 0.06
LMNA-213ENST00000473598 EPN3Q9H201 632 aa15.45■□□□□ 0.06
LMNA-213ENST00000473598 TMEM59LQ9UK28 342 aa15.45■□□□□ 0.06
LMNA-213ENST00000473598 TPX2Q9ULW0 747 aaKnown RBP15.45■□□□□ 0.06
LMNA-213ENST00000473598 H7C4K7 107 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 TBC1D4O60343 1298 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 PPFIA2O75334 1257 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 DNAJB2P25686 324 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 CTNNA2P26232 953 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 CTNNA1P35221 906 aaKnown RBP15.44■□□□□ 0.06
LMNA-213ENST00000473598 SCNN1AP37088 669 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 PIGHQ14442 188 aaPredicted RBP15.44■□□□□ 0.06
LMNA-213ENST00000473598 NFE2Q16621 373 aaPredicted RBP15.44■□□□□ 0.06
LMNA-213ENST00000473598 USP41Q3LFD5 358 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 CAPRIN2Q6IMN6 1127 aaKnown RBP15.44■□□□□ 0.06
LMNA-213ENST00000473598 MFN1Q8IWA4 741 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 EMC1Q8N766 993 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 UBL4BQ8N7F7 174 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 NIPA2Q8N8Q9 360 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 SPDYE1Q8NFV5 336 aaPredicted RBP15.44■□□□□ 0.06
LMNA-213ENST00000473598 ACTRT1Q8TDG2 376 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 RAD9AQ99638 391 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 VN1R3Q9BXE9 311 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 STIM2Q9P246 746 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 HHLA1C9JL84 531 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 RTN3O95197 1032 aaPredicted RBP15.44■□□□□ 0.06
LMNA-213ENST00000473598 ADIGQ0VDE8 80 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 RAB41Q5JT25 222 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 RNF187Q5TA31 235 aaPredicted RBP15.44■□□□□ 0.06
LMNA-213ENST00000473598 EMC10Q5UCC4 262 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 C8orf74Q6P047 294 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 CLEC4CQ8WTT0 213 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 KHSRPQ92945 711 aaKnown RBP eCLIP15.44■□□□□ 0.06
LMNA-213ENST00000473598 TMEM169Q96HH4 297 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 CCDC114Q96M63 670 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 NKX2-4Q9H2Z4 354 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 LRRC4Q9HBW1 653 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 DMAP1Q9NPF5 467 aaPredicted RBP15.44■□□□□ 0.06
LMNA-213ENST00000473598 CHST7Q9NS84 486 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 CHCHD3Q9NX63 227 aaKnown RBP15.44■□□□□ 0.06
LMNA-213ENST00000473598 CORO1CQ9ULV4 474 aaPredicted RBP15.44■□□□□ 0.06
LMNA-213ENST00000473598 PCDHA3Q9Y5H8 950 aa15.44■□□□□ 0.06
LMNA-213ENST00000473598 PSMA2P25787 234 aa15.43■□□□□ 0.06
LMNA-213ENST00000473598 MAGEA8P43361 318 aa15.43■□□□□ 0.06
LMNA-213ENST00000473598 PEX5P50542 639 aa15.43■□□□□ 0.06
LMNA-213ENST00000473598 RNASE9P60153 205 aaKnown RBP15.43■□□□□ 0.06
LMNA-213ENST00000473598 SMAD3P84022 425 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms