RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 SPAARA0A1B0GVQ0 90 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 E2F8A0AVK6 867 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 VPS37CA5D8V6 355 aaPredicted RBP7.35□□□□□ -1.23
CKS1B-205ENST00000473344 ANTXRLA6NF34 631 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 OPHN1O60890 802 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 OLFM2O95897 454 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 SYPP08247 313 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 HOXB2P14652 356 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 TNNI1P19237 187 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 WARSP23381 471 aaKnown RBP7.35□□□□□ -1.23
CKS1B-205ENST00000473344 ITPKAP23677 461 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 YWHAQP27348 245 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 GNL1P36915 607 aaPredicted RBP7.35□□□□□ -1.23
CKS1B-205ENST00000473344 STAT6P42226 847 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 KIR2DL1P43626 348 aaPredicted RBP7.35□□□□□ -1.23
CKS1B-205ENST00000473344 GCGRP47871 477 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 CASP5P51878 434 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 RING1Q06587 406 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 SEMA3BQ13214 749 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 ANO4Q32M45 955 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 MAP7D1Q3KQU3 841 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 MSS51Q4VC12 460 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 EMC10Q5UCC4 262 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 SCARA3Q6AZY7 606 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 RHBDF2Q6PJF5 856 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 CCDC73Q6ZRK6 1079 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 WDR49Q8IV35 697 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 SFTPA1Q8IWL2 248 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 CCDC65Q8IXS2 484 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 NUP93Q8N1F7 819 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 ZNF513Q8N8E2 541 aaPredicted RBP7.35□□□□□ -1.23
CKS1B-205ENST00000473344 NAT16Q8N8M0 369 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 OR5B17Q8NGF7 314 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 CXorf38Q8TB03 319 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 KBTBD7Q8WVZ9 684 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 DNAJC19Q96DA6 116 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 OTUB2Q96DC9 234 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 PDLIM2Q96JY6 352 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 FAM84AQ96KN4 292 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 C8orf48Q96LL4 319 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 TTLL2Q9BWV7 592 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 KIAA1586Q9HCI6 787 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 CRTAC1Q9NQ79 661 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 DEC1Q9P2X7 70 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 MBD1Q9UIS9 605 aaPredicted RBP7.35□□□□□ -1.23
CKS1B-205ENST00000473344 SIX4Q9UIU6 781 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 PILRBQ9UKJ0 227 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 KLK13Q9UKR3 277 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 MYH11P35749 1972 aa7.35□□□□□ -1.23
CKS1B-205ENST00000473344 AKAP13Q12802 2813 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 A0A0A0MRY4 1105 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 A8MXQ7 604 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 UPK3BL1B0FP48 263 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 UPK3BL2E5RIL1 263 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 ADAM23O75077 832 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 NDUFS2O75306 463 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 ZNF217O75362 1048 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 RTN3O95197 1032 aaPredicted RBP7.34□□□□□ -1.23
CKS1B-205ENST00000473344 MBD3O95983 291 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 OAS1P00973 400 aaKnown RBP7.34□□□□□ -1.23
CKS1B-205ENST00000473344 SERPINF2P08697 491 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 DLATP10515 647 aaKnown RBP7.34□□□□□ -1.23
CKS1B-205ENST00000473344 HNRNPLP14866 589 aaKnown RBP eCLIP7.34□□□□□ -1.23
CKS1B-205ENST00000473344 PTPN1P18031 435 aaKnown RBP7.34□□□□□ -1.23
CKS1B-205ENST00000473344 NTSR1P30989 418 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 CEBPZQ03701 1054 aaKnown RBP7.34□□□□□ -1.23
CKS1B-205ENST00000473344 ZNF33AQ06730 810 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 MESP2Q0VG99 397 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 TRPC3Q13507 836 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 HNRNPDQ14103 355 aaKnown RBP7.34□□□□□ -1.23
CKS1B-205ENST00000473344 ZNF423Q2M1K9 1284 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 GAB4Q2WGN9 574 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 WDR72Q3MJ13 1102 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 LY6G5CQ5SRR4 150 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 C10orf76Q5T2E6 689 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 HECTD3Q5T447 861 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 SYCP2LQ5T4T6 812 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 LCE2AQ5TA79 106 aaPredicted RBP7.34□□□□□ -1.23
CKS1B-205ENST00000473344 LRSAM1Q6UWE0 723 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 USP49Q70CQ1 688 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 TRAPPC11Q7Z392 1133 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 C12orf40Q86WS4 652 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 CBWD2Q8IUF1 395 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 CHPFQ8IZ52 775 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 RGL4Q8IZJ4 473 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 MINDY1Q8N5J2 469 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 DEFB119Q8N690 84 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 OVCA2Q8WZ82 227 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 FBXO32Q969P5 355 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 MRPL45Q9BRJ2 306 aaKnown RBP7.34□□□□□ -1.23
CKS1B-205ENST00000473344 MED10Q9BTT4 135 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 LRRC27Q9C0I9 530 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 FSCN3Q9NQT6 498 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 PCDHB9Q9Y5E1 797 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 SRPRBQ9Y5M8 271 aaKnown RBP7.34□□□□□ -1.23
CKS1B-205ENST00000473344 CLIC4Q9Y696 253 aa7.34□□□□□ -1.23
CKS1B-205ENST00000473344 ATP8B3O60423 1300 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 PTPRJQ12913 1337 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 TCHHQ07283 1943 aa7.33□□□□□ -1.24
CKS1B-205ENST00000473344 DSPP15924 2871 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms