RNA–Protein interactions for RNA: ENST00000473258.1

COL6A3-210, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 5,433 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-210ENST00000473258 WRBO00258 174 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 ORC5O43913 435 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 CAMTA2O94983 1202 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 CD2P06729 351 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 ZNF14P17017 642 aaPredicted RBP9.24□□□□□ -0.93
COL6A3-210ENST00000473258 ITGA8P53708 1063 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 SP4Q02446 784 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 SLC18A3Q16572 532 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 PGS1Q32NB8 556 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 BRDTQ58F21 947 aaPredicted RBP9.24□□□□□ -0.93
COL6A3-210ENST00000473258 ZC3H12AQ5D1E8 599 aaKnown RBP9.24□□□□□ -0.93
COL6A3-210ENST00000473258 AADACL4Q5VUY2 407 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 TMEM26Q6ZUK4 368 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 FAM160B2Q86V87 743 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 ERO1BQ86YB8 467 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 HIPK1Q86Z02 1210 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 SAMD14Q8IZD0 417 aaPredicted RBP9.24□□□□□ -0.93
COL6A3-210ENST00000473258 CCDC185Q8N715 623 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 AENQ8WTP8 325 aaKnown RBP9.24□□□□□ -0.93
COL6A3-210ENST00000473258 NLRP3Q96P20 1036 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 CENPOQ9BU64 300 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 KATNAL1Q9BW62 490 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 CXorf21Q9HAI6 301 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 EMILIN3Q9NT22 766 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.24□□□□□ -0.93
COL6A3-210ENST00000473258 ADAM22Q9P0K1 906 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 PCDH10Q9P2E7 1040 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 ZMAT5Q9UDW3 170 aaKnown RBP9.24□□□□□ -0.93
COL6A3-210ENST00000473258 FARSAQ9Y285 508 aaKnown RBP9.24□□□□□ -0.93
COL6A3-210ENST00000473258 DNAJC16Q9Y2G8 782 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 N6AMT1Q9Y5N5 214 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 ARHGAP31Q2M1Z3 1444 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 MYL12BO14950 172 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 MUSKO15146 869 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 PROCP04070 461 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 CYP2E1P05181 493 aaPredicted RBP9.24□□□□□ -0.93
COL6A3-210ENST00000473258 PSMA2P25787 234 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 THOP1P52888 689 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 MSANTD1Q6ZTZ1 278 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 SPIRE2Q8WWL2 714 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 MAP4K1Q92918 833 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 PGM2Q96G03 612 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 FAR2Q96K12 515 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 NSMCE2Q96MF7 247 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 TASP1Q9H6P5 420 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 PNO1Q9NRX1 252 aaKnown RBP9.24□□□□□ -0.93
COL6A3-210ENST00000473258 HPF1Q9NWY4 346 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 TAS2R1Q9NYW7 299 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 KLHL8Q9P2G9 620 aaPredicted RBP9.24□□□□□ -0.93
COL6A3-210ENST00000473258 TBC1D24Q9ULP9 559 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 ERVK-11Q9UQG0 969 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 SYNJ2BP-COX16A0A087WUM0 186 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 BTBD19C9JJ37 291 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 E9PBE3 544 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 HS6ST1O60243 411 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 ACSL4O60488 711 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 KPNA6O60684 536 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 SNAP29O95721 258 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 OXSR1O95747 527 aaPredicted RBP9.24□□□□□ -0.93
COL6A3-210ENST00000473258 ANXA1P04083 346 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 IL1R1P14778 569 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 POU1F1P28069 291 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 CD151P48509 253 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 RPS7P62081 194 aaKnown RBP9.24□□□□□ -0.93
COL6A3-210ENST00000473258 ZNF844Q08AG5 666 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 SPDYCQ5MJ68 293 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 PROM2Q8N271 834 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 DPP10Q8N608 796 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 BPIFB6Q8NFQ5 453 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 ACSBG1Q96GR2 724 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 CRELD1Q96HD1 420 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 CDRT15Q96T59 188 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 VPS33BQ9H267 617 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 PRMT8Q9NR22 394 aaPredicted RBP9.24□□□□□ -0.93
COL6A3-210ENST00000473258 COMMD8Q9NX08 183 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 GDAP2Q9NXN4 497 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 COX16Q9P0S2 106 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 SH3TC1Q8TE82 1336 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 RAB19A4D1S5 217 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 SLCO1B7G3V0H7 640 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 H0YCG3 227 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 ARIH2O95376 493 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 RRM2P31350 389 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 PHKA2P46019 1235 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 LIG4P49917 911 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 ROR1Q01973 937 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 ILF2Q12905 390 aaKnown RBP9.24□□□□□ -0.93
COL6A3-210ENST00000473258 ERMARDQ5T6L9 678 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 FAM131AQ6UXB0 335 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 LRRN4CLQ8ND94 238 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 C3orf58Q8NDZ4 430 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 ASAP3Q8TDY4 903 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 UTP15Q8TED0 518 aaKnown RBP9.24□□□□□ -0.93
COL6A3-210ENST00000473258 ZFYVE28Q9HCC9 887 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 GPN1Q9HCN4 374 aaPredicted RBP9.24□□□□□ -0.93
COL6A3-210ENST00000473258 GRHL1Q9NZI5 618 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 MRPL11Q9Y3B7 192 aaKnown RBP9.24□□□□□ -0.93
COL6A3-210ENST00000473258 ADCY9O60503 1353 aa9.24□□□□□ -0.93
COL6A3-210ENST00000473258 PSMD12O00232 456 aaPredicted RBP9.23□□□□□ -0.93
COL6A3-210ENST00000473258 INPP4BO15327 924 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms