RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 NCAM2O15394 837 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 MSH4O15457 936 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 KINO60870 393 aaKnown RBP3.87□□□□□ -1.79
XRN1-209ENST00000472625 BAG4O95429 457 aaKnown RBP3.87□□□□□ -1.79
XRN1-209ENST00000472625 GALTP07902 379 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 POU2F2P09086 479 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 NCAM1P13591 858 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 IFNAR1P17181 557 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 NCLP19338 710 aaKnown RBP3.87□□□□□ -1.79
XRN1-209ENST00000472625 SP100P23497 879 aaPredicted RBP3.87□□□□□ -1.79
XRN1-209ENST00000472625 CYP3A7P24462 503 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 HOXA9P31269 272 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 PBX3P40426 434 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 QARSP47897 775 aaKnown RBP3.87□□□□□ -1.79
XRN1-209ENST00000472625 KCNC1P48547 511 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 CLCN4P51793 760 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 AK2P54819 239 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 RPL11P62913 178 aaKnown RBP3.87□□□□□ -1.79
XRN1-209ENST00000472625 EXOSC10Q01780 885 aaKnown RBP3.87□□□□□ -1.79
XRN1-209ENST00000472625 POU5F1BQ06416 359 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 GRIK3Q13003 919 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 PPP2R5CQ13362 524 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 LSAMPQ13449 338 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 PUM1Q14671 1186 aaKnown RBP eCLIP3.87□□□□□ -1.79
XRN1-209ENST00000472625 ANGPT1Q15389 498 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 TARBP2Q15633 366 aaKnown RBP3.87□□□□□ -1.79
XRN1-209ENST00000472625 USP41Q3LFD5 358 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 ZNF528Q3MIS6 628 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 MTERF2Q49AM1 385 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 PRR31Q5SQ13 230 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 MROH9Q5TGP6 573 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 RSPO2Q6UXX9 243 aaPredicted RBP3.87□□□□□ -1.79
XRN1-209ENST00000472625 TMC5Q6UXY8 1006 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 LIPIQ6XZB0 460 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 LRRC55Q6ZSA7 311 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 USP53Q70EK8 1073 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 CENPQQ7L2Z9 268 aaPredicted RBP3.87□□□□□ -1.79
XRN1-209ENST00000472625 FERMT3Q86UX7 667 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 ADSSL1Q8N142 457 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 TMEM105Q8N8V8 129 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 CXorf38Q8TB03 319 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 KCNG4Q8TDN1 519 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 TBCKQ8TEA7 893 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 RUBCNQ92622 972 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 LENG9Q96B70 501 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 ZBTB10Q96DT7 871 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 NLRP4Q96MN2 994 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 DEPDC7Q96QD5 511 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 RPS6KC1Q96S38 1066 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 GORASP1Q9BQQ3 440 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 PHF20Q9BVI0 1012 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 COLEC11Q9BWP8 271 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 SLC26A6Q9BXS9 759 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 NFKBIZQ9BYH8 718 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 FAM126AQ9BYI3 521 aaPredicted RBP3.87□□□□□ -1.79
XRN1-209ENST00000472625 LRRC2Q9BYS8 371 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 TRIM55Q9BYV6 548 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 OSBPL6Q9BZF3 934 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 SLKQ9H2G2 1235 aaPredicted RBP3.87□□□□□ -1.79
XRN1-209ENST00000472625 ZSWIM4Q9H7M6 989 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 WDR6Q9NNW5 1121 aaKnown RBP3.87□□□□□ -1.79
XRN1-209ENST00000472625 MAN1C1Q9NR34 630 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 ARHGEF3Q9NR81 526 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 SLC2A4RGQ9NR83 387 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 DDX25Q9UHL0 483 aaKnown RBP3.87□□□□□ -1.79
XRN1-209ENST00000472625 MRPS17Q9Y2R5 130 aaKnown RBP3.87□□□□□ -1.79
XRN1-209ENST00000472625 GIT1Q9Y2X7 761 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 TRAF6Q9Y4K3 522 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 PCDHB2Q9Y5E7 798 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 PCDHGA2Q9Y5H1 932 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 ZFHX2Q9C0A1 2572 aaPredicted RBP3.87□□□□□ -1.79
XRN1-209ENST00000472625 ZFHX4Q86UP3 3567 aa3.87□□□□□ -1.79
XRN1-209ENST00000472625 A0A087WZ62 844 aa3.86□□□□□ -1.79
XRN1-209ENST00000472625 SH3D21A4FU49 640 aa3.86□□□□□ -1.79
XRN1-209ENST00000472625 PRR5-ARHGAP8B1AHC4 643 aa3.86□□□□□ -1.79
XRN1-209ENST00000472625 WNT9AO14904 365 aa3.86□□□□□ -1.79
XRN1-209ENST00000472625 TRAPPC3O43617 180 aa3.86□□□□□ -1.79
XRN1-209ENST00000472625 OFD1O75665 1012 aa3.86□□□□□ -1.79
XRN1-209ENST00000472625 PSMD10O75832 226 aa3.86□□□□□ -1.79
XRN1-209ENST00000472625 CELA3BP08861 270 aa3.86□□□□□ -1.79
XRN1-209ENST00000472625 CNPP09543 421 aaKnown RBP3.86□□□□□ -1.79
XRN1-209ENST00000472625 HNRNPA1P09651 372 aaKnown RBP eCLIP3.86□□□□□ -1.79
XRN1-209ENST00000472625 EPCAMP16422 314 aa3.86□□□□□ -1.79
XRN1-209ENST00000472625 RPS6KB1P23443 525 aa3.86□□□□□ -1.79
XRN1-209ENST00000472625 YWHABP31946 246 aaKnown RBP3.86□□□□□ -1.79
XRN1-209ENST00000472625 OR1G1P47890 313 aa3.86□□□□□ -1.79
XRN1-209ENST00000472625 SLC11A1P49279 550 aa3.86□□□□□ -1.79
XRN1-209ENST00000472625 ARHGAP8P85298 464 aa3.86□□□□□ -1.79
XRN1-209ENST00000472625 DSG1Q02413 1049 aa3.86□□□□□ -1.79
XRN1-209ENST00000472625 SSRP1Q08945 709 aaKnown RBP3.86□□□□□ -1.79
XRN1-209ENST00000472625 SLC9A5Q14940 896 aa3.86□□□□□ -1.79
XRN1-209ENST00000472625 EMC2Q15006 297 aa3.86□□□□□ -1.79
XRN1-209ENST00000472625 NT5DC1Q5TFE4 455 aa3.86□□□□□ -1.79
XRN1-209ENST00000472625 SLC27A1Q6PCB7 646 aa3.86□□□□□ -1.79
XRN1-209ENST00000472625 Q6ZUG5 572 aa3.86□□□□□ -1.79
XRN1-209ENST00000472625 ASCL5Q7RTU5 278 aa3.86□□□□□ -1.79
XRN1-209ENST00000472625 TRMT1LQ7Z2T5 733 aaKnown RBP3.86□□□□□ -1.79
XRN1-209ENST00000472625 DGLUCYQ7Z3D6 616 aa3.86□□□□□ -1.79
XRN1-209ENST00000472625 FRMD5Q7Z6J6 570 aa3.86□□□□□ -1.79
XRN1-209ENST00000472625 MRPL10Q7Z7H8 261 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms