RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 APEX2Q9UBZ4 518 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 CPQQ9Y646 472 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 PKD1L2Q7Z442 2459 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 NBEAQ8NFP9 2946 aa12.51□□□□□ -0.41
CLRN1-205ENST00000472224 ATG2BQ96BY7 2078 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 TULP2O00295 520 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 O00370 1275 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 SCAMP3O14828 347 aaKnown RBP12.5□□□□□ -0.41
CLRN1-205ENST00000472224 CHADO15335 359 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 CDK11BP21127 795 aaKnown RBP12.5□□□□□ -0.41
CLRN1-205ENST00000472224 WEE1P30291 646 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 KPNA1P52294 538 aaPredicted RBP12.5□□□□□ -0.41
CLRN1-205ENST00000472224 PDE4CQ08493 712 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 FCHO2Q0JRZ9 810 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 BST2Q10589 180 aaKnown RBP12.5□□□□□ -0.41
CLRN1-205ENST00000472224 USP4Q13107 963 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 RAPGEF1Q13905 1077 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 MTF1Q14872 753 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 FKBP15Q5T1M5 1219 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 HECTD3Q5T447 861 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 TRIM68Q6AZZ1 485 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 MAMSTRQ6ZN01 415 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 ENOSF1Q7L5Y1 443 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 PIGZQ86VD9 579 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 ANKRD52Q8NB46 1076 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 NETO1Q8TDF5 533 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 SHDQ96IW2 340 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 FAM81BQ96LP2 452 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 CCSER2Q9H7U1 834 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 LRRC4Q9HBW1 653 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 PNPLA8Q9NP80 782 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 PRMT8Q9NR22 394 aaPredicted RBP12.5□□□□□ -0.41
CLRN1-205ENST00000472224 TLR8Q9NR97 1041 aaKnown RBP12.5□□□□□ -0.41
CLRN1-205ENST00000472224 COMMD8Q9NX08 183 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 AJAP1Q9UKB5 411 aaPredicted RBP12.5□□□□□ -0.41
CLRN1-205ENST00000472224 ANGPTL2Q9UKU9 493 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 SCML2Q9UQR0 700 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 PIAS3Q9Y6X2 628 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 ZFYVE26Q68DK2 2539 aa12.5□□□□□ -0.41
CLRN1-205ENST00000472224 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.49□□□□□ -0.41
CLRN1-205ENST00000472224 A0A1W2PQH9 124 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 SOBPA7XYQ1 873 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 XPO1O14980 1071 aaKnown RBP12.49□□□□□ -0.41
CLRN1-205ENST00000472224 COCHO43405 550 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 THAP12O43422 761 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 TLR5O60602 858 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 LETM1O95202 739 aaPredicted RBP12.49□□□□□ -0.41
CLRN1-205ENST00000472224 OAS1P00973 400 aaKnown RBP12.49□□□□□ -0.41
CLRN1-205ENST00000472224 PNMA6AP0CW24 399 aaPredicted RBP12.49□□□□□ -0.41
CLRN1-205ENST00000472224 IRF1P10914 325 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 CD72P21854 359 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 PMLP29590 882 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 GNA15P30679 374 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 SOX9P48436 509 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 IFNAR2P48551 515 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 PGFP49763 221 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 RGS7P49802 495 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 ZNF132P52740 706 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 PRKCQQ04759 706 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 TNK2Q07912 1038 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 ZNF268Q14587 947 aaPredicted RBP12.49□□□□□ -0.41
CLRN1-205ENST00000472224 ZNF77Q15935 545 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 LPAL2Q16609 132 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 PCMTD1Q96MG8 357 aaPredicted RBP12.49□□□□□ -0.41
CLRN1-205ENST00000472224 RNF38Q9H0F5 515 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 EBF3Q9H4W6 596 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 SIX2Q9NPC8 291 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 GKN1Q9NS71 199 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 GTSE1Q9NYZ3 720 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 IL37Q9NZH6 218 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 NAGPAQ9UK23 515 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 DNAJC12Q9UKB3 198 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 KIAA1257Q9ULG3 409 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 NDRG2Q9UN36 371 aaKnown RBP12.49□□□□□ -0.41
CLRN1-205ENST00000472224 ARHGAP26Q9UNA1 814 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.49□□□□□ -0.41
CLRN1-205ENST00000472224 FHOD1Q9Y613 1164 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 WNT6Q9Y6F9 365 aa12.49□□□□□ -0.41
CLRN1-205ENST00000472224 LAMA1P25391 3075 aa12.48□□□□□ -0.41
CLRN1-205ENST00000472224 FAM170BA6NMN3 283 aa12.48□□□□□ -0.41
CLRN1-205ENST00000472224 LEFTY2O00292 366 aa12.48□□□□□ -0.41
CLRN1-205ENST00000472224 PIK3R2O00459 728 aa12.48□□□□□ -0.41
CLRN1-205ENST00000472224 GDF9O60383 454 aa12.48□□□□□ -0.41
CLRN1-205ENST00000472224 SETSIPP0DME0 302 aa12.48□□□□□ -0.41
CLRN1-205ENST00000472224 TDGF1P13385 188 aa12.48□□□□□ -0.41
CLRN1-205ENST00000472224 LCP1P13796 627 aa12.48□□□□□ -0.41
CLRN1-205ENST00000472224 ARSAP15289 507 aa12.48□□□□□ -0.41
CLRN1-205ENST00000472224 PFKLP17858 780 aa12.48□□□□□ -0.41
CLRN1-205ENST00000472224 KLK7P49862 253 aa12.48□□□□□ -0.41
CLRN1-205ENST00000472224 TKTL1P51854 596 aa12.48□□□□□ -0.41
CLRN1-205ENST00000472224 KIF11P52732 1056 aa12.48□□□□□ -0.41
CLRN1-205ENST00000472224 COPB1P53618 953 aaKnown RBP12.48□□□□□ -0.41
CLRN1-205ENST00000472224 DMWDQ09019 674 aa12.48□□□□□ -0.41
CLRN1-205ENST00000472224 ADIGQ0VDE8 80 aa12.48□□□□□ -0.41
CLRN1-205ENST00000472224 STILQ15468 1287 aa12.48□□□□□ -0.41
CLRN1-205ENST00000472224 LCLAT1Q6UWP7 414 aa12.48□□□□□ -0.41
CLRN1-205ENST00000472224 SIX6OS1Q8N1H7 587 aa12.48□□□□□ -0.41
CLRN1-205ENST00000472224 ZSWIM1Q9BR11 485 aa12.48□□□□□ -0.41
CLRN1-205ENST00000472224 OSBPL6Q9BZF3 934 aa12.48□□□□□ -0.41
CLRN1-205ENST00000472224 ULBP1Q9BZM6 244 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms