RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 SCUBE3Q8IX30 993 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 HACE1Q8IYU2 909 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 PQLC3Q8N755 202 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 PCDH19Q8TAB3 1148 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 NPLOC4Q8TAT6 608 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 OSMRQ99650 979 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 EIF2AQ9BY44 585 aaKnown RBP11.06□□□□□ -0.64
APLF-204ENST00000471727 VPS11Q9H270 941 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 NRDE2Q9H7Z3 1164 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.06□□□□□ -0.64
APLF-204ENST00000471727 TUBGCP4Q9UGJ1 667 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 ZNF180Q9UJW8 692 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 USH1CQ9Y6N9 552 aa11.06□□□□□ -0.64
APLF-204ENST00000471727 XPO1O14980 1071 aaKnown RBP11.05□□□□□ -0.64
APLF-204ENST00000471727 CHUKO15111 745 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 KPNA6O60684 536 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 SPAG7O75391 227 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 DCTN3O75935 186 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 ITGBL1O95965 494 aaPredicted RBP11.05□□□□□ -0.64
APLF-204ENST00000471727 MT-ND3P03897 115 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 INHBAP08476 426 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 KRT4P19013 534 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 CYP2F1P24903 491 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 LRPAP1P30533 357 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 L1CAMP32004 1257 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 FOXN2P32314 431 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 ELK3P41970 407 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 HDAC4P56524 1084 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 CDK16Q00536 496 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 RIPK1Q13546 671 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 SNX17Q15036 470 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 MSS51Q4VC12 460 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 SLC45A4Q5BKX6 768 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 MORN1Q5T089 497 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 SH3PXD2AQ5TCZ1 1133 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 CYB5D1Q6P9G0 228 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 C1orf228Q6PIY5 440 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 NPNTQ6UXI9 565 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 PAXIP1Q6ZW49 1069 aaPredicted RBP11.05□□□□□ -0.64
APLF-204ENST00000471727 CYS1Q717R9 158 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 PARP9Q8IXQ6 854 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 C7orf31Q8N865 590 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 DCAKDQ8WVC6 231 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 SLC44A1Q8WWI5 657 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 HNRNPABQ99729 332 aaKnown RBP11.05□□□□□ -0.64
APLF-204ENST00000471727 PAIP2Q9BPZ3 127 aaKnown RBP11.05□□□□□ -0.64
APLF-204ENST00000471727 AP5M1Q9H0R1 490 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 ZNF408Q9H9D4 720 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 RAB6BQ9NRW1 208 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 FAM49BQ9NUQ9 324 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.05□□□□□ -0.64
APLF-204ENST00000471727 ZNF236Q9UL36 1845 aa11.05□□□□□ -0.64
APLF-204ENST00000471727 RALGAPA2Q2PPJ7 1873 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 TCRBV7S3A2A0A539 114 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 PPEF2O14830 753 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 MGRN1O60291 552 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 EDF1O60869 148 aaKnown RBP11.04□□□□□ -0.64
APLF-204ENST00000471727 ATP2C2O75185 946 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 GRAP2O75791 330 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 RPLP2P05387 115 aaKnown RBP11.04□□□□□ -0.64
APLF-204ENST00000471727 RBL1P28749 1068 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 RPA3P35244 121 aaPredicted RBP11.04□□□□□ -0.64
APLF-204ENST00000471727 FDFT1P37268 417 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 ARL4AP40617 200 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 MATKP42679 507 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 AIF1P55008 147 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 SLC18A2Q05940 514 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 HP1BP3Q5SSJ5 553 aaPredicted RBP11.04□□□□□ -0.64
APLF-204ENST00000471727 SWT1Q5T5J6 900 aaKnown RBP11.04□□□□□ -0.64
APLF-204ENST00000471727 FYB2Q5VWT5 728 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 OLFML2BQ68BL8 750 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 TLK2Q86UE8 772 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 SLC26A11Q86WA9 606 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 C4orf33Q8N1A6 199 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 VPS52Q8N1B4 723 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 BANPQ8N9N5 519 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 MZB1Q8WU39 189 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 KBTBD7Q8WVZ9 684 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 KCTD13Q8WZ19 329 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 C18orf25Q96B23 403 aaPredicted RBP11.04□□□□□ -0.64
APLF-204ENST00000471727 MTBPQ96DY7 904 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 PIWIL1Q96J94 861 aaKnown RBP11.04□□□□□ -0.64
APLF-204ENST00000471727 C10orf88Q9H8K7 445 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 XAB2Q9HCS7 855 aaKnown RBP11.04□□□□□ -0.64
APLF-204ENST00000471727 MLXIPLQ9NP71 852 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 ETNK2Q9NVF9 386 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 PHTF1Q9UMS5 762 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 PIN4Q9Y237 131 aaKnown RBP11.04□□□□□ -0.64
APLF-204ENST00000471727 GINS2Q9Y248 185 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 HEY1Q9Y5J3 304 aa11.04□□□□□ -0.64
APLF-204ENST00000471727 SF3B1O75533 1304 aaKnown RBP eCLIP11.04□□□□□ -0.64
APLF-204ENST00000471727 C17orf102A2RUQ5 167 aa11.03□□□□□ -0.64
APLF-204ENST00000471727 PIK3R2O00459 728 aa11.03□□□□□ -0.64
APLF-204ENST00000471727 DAB1O75553 588 aa11.03□□□□□ -0.64
APLF-204ENST00000471727 KRT37O76014 449 aa11.03□□□□□ -0.64
APLF-204ENST00000471727 STK10O94804 968 aaKnown RBP11.03□□□□□ -0.64
APLF-204ENST00000471727 UBOX5O94941 541 aa11.03□□□□□ -0.64
APLF-204ENST00000471727 ZNF865P0CJ78 1059 aaPredicted RBP11.03□□□□□ -0.64
APLF-204ENST00000471727 TROVE2P10155 538 aaKnown RBP eCLIP11.03□□□□□ -0.64
APLF-204ENST00000471727 MLNP12872 115 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms