RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 SMIM22K7EJ46 135 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 MFN2O95140 757 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 MPOP05164 745 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 SNRPAP09012 282 aaKnown RBP13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 OVGP1Q12889 678 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 NAA30Q147X3 362 aaPredicted RBP13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 MYO1HQ8N1T3 1032 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ARRDC4Q8NCT1 418 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 KRT35Q92764 455 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 PHF21BQ96EK2 531 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 GRID2IPA4D2P6 1211 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ENO4A6NNW6 628 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 FAM25AB3EWG3 89 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 FAM25CB3EWG5 89 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 FAM25GB3EWG6 89 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 PHF2O75151 1096 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 RHOCP08134 193 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 SOX6P35712 828 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CTCFP49711 727 aaPredicted RBP13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 KLC1Q07866 573 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 STILQ15468 1287 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CBWD3Q5JTY5 395 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CBWD5Q5RIA9 395 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CCSAPQ6IQ19 270 aaPredicted RBP13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ATG4CQ96DT6 458 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 TBC1D23Q9NUY8 699 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 SOHLH2Q9NX45 425 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 TBKBP1A7MCY6 615 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 THP07101 528 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 UCHL3P15374 230 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 MSH3P20585 1137 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 COMTP21964 271 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 RHOAP61586 193 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 FNDC3BQ53EP0 1204 aaKnown RBP13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 RRN3P2A6NIE6 340 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 SARSP49591 514 aaKnown RBP13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 RHAGQ02094 409 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 RRAGCQ9HB90 399 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 KLHL20Q9Y2M5 609 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 METTL21CQ5VZV1 264 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 EDEM1Q92611 657 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 GAL3ST3Q96A11 431 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 KCNK16Q96T55 309 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ABCA5Q8WWZ7 1642 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 KYNUQ16719 465 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 EDRF1Q3B7T1 1238 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ATAD3BQ5T9A4 648 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CAPSLQ8WWF8 208 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 PIH1D1Q9NWS0 290 aaKnown RBP13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ARL2BPQ9Y2Y0 163 aa13.63□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 METP08581 1390 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ANXA9O76027 345 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 MAGEA4P43358 317 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ZSWIM7Q19AV6 140 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CDC42EP5Q6NZY7 148 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 LINC00523Q86TU6 105 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 C19orf18Q8NEA5 215 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 RAD21L1Q9H4I0 556 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 RSAD1Q9HA92 442 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 KLC4Q9NSK0 619 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 TRPM5Q9NZQ8 1165 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 PTCH1Q13635 1447 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 KNTC1P50748 2209 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 TRIM3O75382 744 aaPredicted RBP13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CCNIQ14094 377 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ATXN3LQ9H3M9 355 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 GPRC5CQ9NQ84 441 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 TUBE1Q9UJT0 475 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 IGSF9BQ9UPX0 1349 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 KPNA3O00505 521 aaPredicted RBP13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 AMPD2Q01433 879 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 NEK7Q8TDX7 302 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 RUBCNQ92622 972 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CEP41Q9BYV8 373 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CCDC134Q9H6E4 229 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 AVENQ9NQS1 362 aaPredicted RBP13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 USP27XA6NNY8 438 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 NDUFS2O75306 463 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CDH16O75309 829 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 SERPINB9P50453 376 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ITGA8P53708 1063 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 OXCT1P55809 520 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 KIAA0408Q6ZU52 694 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 RDM1Q8NG50 284 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 EMILIN2Q9BXX0 1053 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 THG1LQ9NWX6 298 aaKnown RBP13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 UVRAGQ9P2Y5 699 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 RPAP1Q9BWH6 1393 aaPredicted RBP13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 RP1P56715 2156 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ZNF543Q08ER8 600 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 POU6F1Q14863 301 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 LLGL2Q6P1M3 1020 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 PACS1Q6VY07 963 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CBWD2Q8IUF1 395 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ADGRF2Q8IZF7 708 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ADGRE3Q9BY15 652 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ACTR8Q9H981 624 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 KLHL2O95198 593 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 TARSP26639 723 aaKnown RBP13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 TMED10P49755 219 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms