RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 SMPD4Q9NXE4 827 aa16.04■□□□□ 0.16
SDC3-203ENST00000471567 MYO6Q9UM54 1294 aa16.04■□□□□ 0.16
SDC3-203ENST00000471567 YJEFN3A6XGL0 299 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 E7ENQ6 273 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 MAN2B1O00754 1011 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 GFPT2O94808 682 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 TBX18O95935 607 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 PDGFBP01127 241 aaPredicted RBP16.03■□□□□ 0.16
SDC3-203ENST00000471567 CDH5P33151 784 aaPredicted RBP16.03■□□□□ 0.16
SDC3-203ENST00000471567 IFNAR2P48551 515 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 CLCN5P51795 746 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 UBASH3AP57075 661 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 GOLGA8FQ08AF8 430 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 GOLGA8DPQ0D2H9 430 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 PDCLQ13371 301 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 RUNX3Q13761 415 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 ITPRIPL2Q3MIP1 535 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 IER5LQ5T953 404 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 BSPRYQ5W0U4 402 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 CACNA2D4Q7Z3S7 1137 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 FMNL3Q8IVF7 1028 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 SUGP1Q8IWZ8 645 aaKnown RBP16.03■□□□□ 0.16
SDC3-203ENST00000471567 DDX1Q92499 740 aaKnown RBP16.03■□□□□ 0.16
SDC3-203ENST00000471567 NDRG1Q92597 394 aaKnown RBP16.03■□□□□ 0.16
SDC3-203ENST00000471567 NELL2Q99435 816 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 EDEM3Q9BZQ6 932 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 PDCL3Q9H2J4 239 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 TBC1D17Q9HA65 648 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 ABCC13Q9NSE7 274 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 CFAP97Q9P2B7 532 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 TBC1D14Q9P2M4 693 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 CYTH4Q9UIA0 394 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 HELZP42694 1942 aaKnown RBP16.03■□□□□ 0.16
SDC3-203ENST00000471567 KIF26AQ9ULI4 1882 aaPredicted RBP16.03■□□□□ 0.16
SDC3-203ENST00000471567 TRIOO75962 3097 aa16.03■□□□□ 0.16
SDC3-203ENST00000471567 KANSL1LA0AUZ9 987 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 LSM8O95777 96 aaKnown RBP16.02■□□□□ 0.16
SDC3-203ENST00000471567 CCDC172P0C7W6 258 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 KPNA1P52294 538 aaPredicted RBP16.02■□□□□ 0.16
SDC3-203ENST00000471567 COG7P83436 770 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 ASTLQ6HA08 431 aaPredicted RBP16.02■□□□□ 0.16
SDC3-203ENST00000471567 ZNF852Q6ZMS4 543 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 TPRG1Q6ZUI0 275 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 RSRC2Q7L4I2 434 aaKnown RBP16.02■□□□□ 0.16
SDC3-203ENST00000471567 BEND5Q7L4P6 421 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 NOP9Q86U38 636 aaKnown RBP16.02■□□□□ 0.16
SDC3-203ENST00000471567 SCUBE3Q8IX30 993 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 TMEM35BQ8NCS4 154 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 TTC16Q8NEE8 873 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 FLCNQ8NFG4 579 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 EPS8L1Q8TE68 723 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 RNF139Q8WU17 664 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 GOLGA1Q92805 767 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 ATP2A3Q93084 1043 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 OTUB2Q96DC9 234 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 PPP1R13BQ96KQ4 1090 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 TRIM62Q9BVG3 475 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 MIS12Q9H081 205 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 HPS4Q9NQG7 708 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 GTSE1Q9NYZ3 720 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 NOCTQ9UK39 431 aaKnown RBP16.02■□□□□ 0.16
SDC3-203ENST00000471567 NUDT5Q9UKK9 219 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 STRIP2Q9ULQ0 834 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 MRPS17Q9Y2R5 130 aaKnown RBP16.02■□□□□ 0.16
SDC3-203ENST00000471567 SH3BP1Q9Y3L3 701 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 WNT6Q9Y6F9 365 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 PIAS3Q9Y6X2 628 aa16.02■□□□□ 0.16
SDC3-203ENST00000471567 E5RJQ4 531 aa16.01■□□□□ 0.15
SDC3-203ENST00000471567 PIK3R2O00459 728 aa16.01■□□□□ 0.15
SDC3-203ENST00000471567 STK25O00506 426 aa16.01■□□□□ 0.15
SDC3-203ENST00000471567 LTFP02788 710 aa16.01■□□□□ 0.15
SDC3-203ENST00000471567 AMPD2Q01433 879 aa16.01■□□□□ 0.15
SDC3-203ENST00000471567 CDR2Q01850 454 aa16.01■□□□□ 0.15
SDC3-203ENST00000471567 TNK2Q07912 1038 aa16.01■□□□□ 0.15
SDC3-203ENST00000471567 EFEMP1Q12805 493 aa16.01■□□□□ 0.15
SDC3-203ENST00000471567 NR1H3Q13133 447 aa16.01■□□□□ 0.15
SDC3-203ENST00000471567 EML3Q32P44 896 aa16.01■□□□□ 0.15
SDC3-203ENST00000471567 FIGNQ5HY92 759 aa16.01■□□□□ 0.15
SDC3-203ENST00000471567 CWF19L1Q69YN2 538 aaKnown RBP16.01■□□□□ 0.15
SDC3-203ENST00000471567 TRIM68Q6AZZ1 485 aa16.01■□□□□ 0.15
SDC3-203ENST00000471567 HTR3DQ70Z44 454 aa16.01■□□□□ 0.15
SDC3-203ENST00000471567 RALGPS2Q86X27 583 aaPredicted RBP16.01■□□□□ 0.15
SDC3-203ENST00000471567 PASD1Q8IV76 773 aa16.01■□□□□ 0.15
SDC3-203ENST00000471567 CPA6Q8N4T0 437 aa16.01■□□□□ 0.15
SDC3-203ENST00000471567 C1orf131Q8NDD1 294 aaKnown RBP16.01■□□□□ 0.15
SDC3-203ENST00000471567 CPXM1Q96SM3 734 aa16.01■□□□□ 0.15
SDC3-203ENST00000471567 NUP58Q9BVL2 599 aa16.01■□□□□ 0.15
SDC3-203ENST00000471567 OSBPL6Q9BZF3 934 aa16.01■□□□□ 0.15
SDC3-203ENST00000471567 LINC00597Q9H2U6 94 aa16.01■□□□□ 0.15
SDC3-203ENST00000471567 EBF3Q9H4W6 596 aa16.01■□□□□ 0.15
SDC3-203ENST00000471567 ECT2Q9H8V3 914 aa16.01■□□□□ 0.15
SDC3-203ENST00000471567 MARCH2Q9P0N8 246 aa16.01■□□□□ 0.15
SDC3-203ENST00000471567 LSM7Q9UK45 103 aaKnown RBP16.01■□□□□ 0.15
SDC3-203ENST00000471567 COL4A2P08572 1712 aa16■□□□□ 0.15
SDC3-203ENST00000471567 SHISA7A6NL88 538 aa16■□□□□ 0.15
SDC3-203ENST00000471567 SPECC1L-ADORA2AF8WAN1 911 aa16■□□□□ 0.15
SDC3-203ENST00000471567 MDM4O15151 490 aa16■□□□□ 0.15
SDC3-203ENST00000471567 PAPSS1O43252 624 aaPredicted RBP16■□□□□ 0.15
SDC3-203ENST00000471567 NFATC1O95644 943 aa16■□□□□ 0.15
SDC3-203ENST00000471567 TPM3P06753 285 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms