RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 TNNC2P02585 160 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 ABCB4P21439 1286 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 MAGEA11P43364 429 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 PPP3CCP48454 512 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 TRAPPC10P48553 1259 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 CCT8P50990 548 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 TPMTP51580 245 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 AFF3P51826 1226 aaKnown RBP7.3□□□□□ -1.24
HDAC1-204ENST00000471488 CACNA2D1P54289 1103 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 CDH8P55286 799 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 WNT7BP56706 349 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 C21orf59P57076 290 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 BNC1Q01954 994 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 TARDBPQ13148 414 aaKnown RBP eCLIP7.3□□□□□ -1.24
HDAC1-204ENST00000471488 DNAJC3Q13217 504 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 CAMK2BQ13554 666 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 LY6DQ14210 128 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 KIF19Q2TAC6 998 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 INAVAQ3KP66 663 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 HECTD3Q5T447 861 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 ARHGAP40Q5TG30 622 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 USP49Q70CQ1 688 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 DYMQ7RTS9 669 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 PRICKLE2Q7Z3G6 844 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 GATAD2AQ86YP4 633 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 TMPRSS6Q8IU80 811 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 ETFBKMTQ8IXQ9 262 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 TOP6BLQ8N6T0 577 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 ZSWIM2Q8NEG5 633 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 KCNV2Q8TDN2 545 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 GANCQ8TET4 914 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 WBP2Q969T9 261 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 JAKMIP2Q96AA8 810 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 OTUB2Q96DC9 234 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 HPDLQ96IR7 371 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 ANKRD36BP1Q96IX9 119 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 SPATA17Q96L03 361 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 PKMYT1Q99640 499 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 TRIM9Q9C026 710 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 CIPCQ9C0C6 399 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 MRPL44Q9H9J2 332 aaKnown RBP7.3□□□□□ -1.24
HDAC1-204ENST00000471488 PDE11AQ9HCR9 933 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 WSB2Q9NYS7 404 aaPredicted RBP7.3□□□□□ -1.24
HDAC1-204ENST00000471488 KCND2Q9NZV8 630 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 ITGA11Q9UKX5 1188 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 HCN2Q9UL51 889 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 STON1Q9Y6Q2 735 aa7.3□□□□□ -1.24
HDAC1-204ENST00000471488 A0A0A0MRY4 1105 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 TEX51A0A1B0GUA7 166 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 METTL12A8MUP2 240 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 KCNJ18B7U540 433 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 H0Y8X5 98 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 LAD1O00515 517 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 ENC1O14682 589 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 HOXC11O43248 304 aaPredicted RBP7.29□□□□□ -1.24
HDAC1-204ENST00000471488 SLC28A2O43868 658 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 GCNT3O95395 438 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 EPHX1P07099 455 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 ZNF883P0CG24 379 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 CHRM1P11229 460 aaPredicted RBP7.29□□□□□ -1.24
HDAC1-204ENST00000471488 PFKLP17858 780 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 GNL1P36915 607 aaPredicted RBP7.29□□□□□ -1.24
HDAC1-204ENST00000471488 UBA7P41226 1012 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 TOB1P50616 345 aaPredicted RBP7.29□□□□□ -1.24
HDAC1-204ENST00000471488 TNNC1P63316 161 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 GOLGA8FQ08AF8 430 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 GOLGA8DPQ0D2H9 430 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 POSTNQ15063 836 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 SMAD1Q15797 465 aaKnown RBP7.29□□□□□ -1.24
HDAC1-204ENST00000471488 HES3Q5TGS1 186 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 BROXQ5VW32 411 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 FAM171BQ6P995 826 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 CRELD2Q6UXH1 353 aaPredicted RBP7.29□□□□□ -1.24
HDAC1-204ENST00000471488 TMPRSS12Q86WS5 348 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 SFR1Q86XK3 245 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 NT5DC4Q86YG4 428 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 NUP93Q8N1F7 819 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 LRRC52Q8N7C0 313 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 FBXO18Q8NFZ0 1043 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 SCAMP5Q8TAC9 235 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 BAHD1Q8TBE0 780 aaPredicted RBP7.29□□□□□ -1.24
HDAC1-204ENST00000471488 CNDP2Q96KP4 475 aaKnown RBP7.29□□□□□ -1.24
HDAC1-204ENST00000471488 GABRG3Q99928 467 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 NUP58Q9BVL2 599 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 TRIM4Q9C037 500 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 ZNF518BQ9C0D4 1074 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 MKRN2Q9H000 416 aaKnown RBP7.29□□□□□ -1.24
HDAC1-204ENST00000471488 DPEP3Q9H4B8 488 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 WDR35Q9P2L0 1181 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 LSM7Q9UK45 103 aaKnown RBP7.29□□□□□ -1.24
HDAC1-204ENST00000471488 EXOC7Q9UPT5 735 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 ANKRD6Q9Y2G4 727 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 SLCO1B1Q9Y6L6 691 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 MAST4O15021 2626 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 KALRNO60229 2985 aa7.29□□□□□ -1.24
HDAC1-204ENST00000471488 MUC22E2RYF6 1773 aaPredicted RBP7.28□□□□□ -1.24
HDAC1-204ENST00000471488 MYO18AQ92614 2054 aaKnown RBP7.28□□□□□ -1.24
HDAC1-204ENST00000471488 CAPN8A6NHC0 703 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 A8MXQ7 604 aa7.28□□□□□ -1.24
HDAC1-204ENST00000471488 BRINP1O60477 761 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms