RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 CEP63Q96MT8 703 aa14.23□□□□□ -0.13
HMGN1-211ENST00000471260 CDK5RAP1Q96SZ6 601 aaKnown RBP14.23□□□□□ -0.13
HMGN1-211ENST00000471260 PNKPQ96T60 521 aa14.23□□□□□ -0.13
HMGN1-211ENST00000471260 DLL3Q9NYJ7 618 aa14.23□□□□□ -0.13
HMGN1-211ENST00000471260 USP3Q9Y6I4 520 aa14.23□□□□□ -0.13
HMGN1-211ENST00000471260 AXIN1O15169 862 aa14.22□□□□□ -0.13
HMGN1-211ENST00000471260 HOXC11O43248 304 aaPredicted RBP14.22□□□□□ -0.13
HMGN1-211ENST00000471260 RPP40O75818 363 aaKnown RBP14.22□□□□□ -0.13
HMGN1-211ENST00000471260 APBB3O95704 486 aa14.22□□□□□ -0.13
HMGN1-211ENST00000471260 APODP05090 189 aa14.22□□□□□ -0.13
HMGN1-211ENST00000471260 TNFRSF4P43489 277 aa14.22□□□□□ -0.13
HMGN1-211ENST00000471260 PMS1P54277 932 aaKnown RBP14.22□□□□□ -0.13
HMGN1-211ENST00000471260 SLC8A3P57103 927 aa14.22□□□□□ -0.13
HMGN1-211ENST00000471260 YWHAEP62258 255 aaKnown RBP14.22□□□□□ -0.13
HMGN1-211ENST00000471260 CBWD6Q4V339 395 aa14.22□□□□□ -0.13
HMGN1-211ENST00000471260 CBWD3Q5JTY5 395 aa14.22□□□□□ -0.13
HMGN1-211ENST00000471260 CBWD5Q5RIA9 395 aa14.22□□□□□ -0.13
HMGN1-211ENST00000471260 BTBD8Q5XKL5 378 aa14.22□□□□□ -0.13
HMGN1-211ENST00000471260 ARHGAP17Q68EM7 881 aa14.22□□□□□ -0.13
HMGN1-211ENST00000471260 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.22□□□□□ -0.13
HMGN1-211ENST00000471260 SLC4A11Q8NBS3 891 aa14.22□□□□□ -0.13
HMGN1-211ENST00000471260 KCNV2Q8TDN2 545 aa14.22□□□□□ -0.13
HMGN1-211ENST00000471260 SLC35C1Q96A29 364 aa14.22□□□□□ -0.13
HMGN1-211ENST00000471260 KLF16Q9BXK1 252 aaPredicted RBP14.22□□□□□ -0.13
HMGN1-211ENST00000471260 NUP62CLQ9H1M0 184 aa14.22□□□□□ -0.13
HMGN1-211ENST00000471260 SPHK2Q9NRA0 654 aa14.22□□□□□ -0.13
HMGN1-211ENST00000471260 CLIC5Q9NZA1 410 aa14.22□□□□□ -0.13
HMGN1-211ENST00000471260 PTMAP06454 111 aaKnown RBP14.21□□□□□ -0.13
HMGN1-211ENST00000471260 RALAP11233 206 aa14.21□□□□□ -0.13
HMGN1-211ENST00000471260 TBXAS1P24557 533 aaPredicted RBP14.21□□□□□ -0.13
HMGN1-211ENST00000471260 GRIA2P42262 883 aa14.21□□□□□ -0.13
HMGN1-211ENST00000471260 PLA2G4AP47712 749 aa14.21□□□□□ -0.13
HMGN1-211ENST00000471260 RAD23BP54727 409 aa14.21□□□□□ -0.13
HMGN1-211ENST00000471260 SRSF5Q13243 272 aaKnown RBP14.21□□□□□ -0.13
HMGN1-211ENST00000471260 LPAL2Q16609 132 aa14.21□□□□□ -0.13
HMGN1-211ENST00000471260 ZNF394Q53GI3 561 aa14.21□□□□□ -0.13
HMGN1-211ENST00000471260 LY6G5CQ5SRR4 150 aa14.21□□□□□ -0.13
HMGN1-211ENST00000471260 GPRIN1Q7Z2K8 1008 aa14.21□□□□□ -0.13
HMGN1-211ENST00000471260 ARHGAP18Q8N392 663 aa14.21□□□□□ -0.13
HMGN1-211ENST00000471260 FAM160A2Q8N612 972 aaPredicted RBP14.21□□□□□ -0.13
HMGN1-211ENST00000471260 ANKRD52Q8NB46 1076 aa14.21□□□□□ -0.13
HMGN1-211ENST00000471260 ERCC4Q92889 916 aaPredicted RBP14.21□□□□□ -0.13
HMGN1-211ENST00000471260 TATDN2Q93075 761 aa14.21□□□□□ -0.13
HMGN1-211ENST00000471260 ZC3H10Q96K80 434 aaKnown RBP14.21□□□□□ -0.13
HMGN1-211ENST00000471260 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.21□□□□□ -0.13
HMGN1-211ENST00000471260 DNMT3LQ9UJW3 386 aa14.21□□□□□ -0.13
HMGN1-211ENST00000471260 LSM7Q9UK45 103 aaKnown RBP14.21□□□□□ -0.13
HMGN1-211ENST00000471260 MAN1B1Q9UKM7 699 aa14.21□□□□□ -0.13
HMGN1-211ENST00000471260 KIAA1257Q9ULG3 409 aa14.21□□□□□ -0.13
HMGN1-211ENST00000471260 MMP17Q9ULZ9 603 aa14.21□□□□□ -0.13
HMGN1-211ENST00000471260 USP18Q9UMW8 372 aa14.21□□□□□ -0.13
HMGN1-211ENST00000471260 DCHS1Q96JQ0 3298 aa14.21□□□□□ -0.13
HMGN1-211ENST00000471260 BICDL2A1A5D9 508 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 TRIM49BA6NDI0 452 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 GOLGA6L6A8MZA4 724 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 P4HA2O15460 535 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 CYP26A1O43174 497 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 RRP9O43818 475 aaKnown RBP14.2□□□□□ -0.14
HMGN1-211ENST00000471260 GREM1O60565 184 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 KAT7O95251 611 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 RARGP13631 454 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 PGFP49763 221 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 DGKEP52429 567 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 SPEM2Q0P670 501 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 CETN1Q12798 172 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 CUL2Q13617 745 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 CSRP2Q16527 193 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 RAB41Q5JT25 222 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 DGLUCYQ7Z3D6 616 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 C11orf74Q86VG3 221 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 BBS7Q8IWZ6 715 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 ETFBKMTQ8IXQ9 262 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 TSTD1Q8NFU3 115 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 HHIPQ96QV1 700 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 PARD6AQ9NPB6 346 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 ARHGEF4Q9NR80 690 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 SEMA4GQ9NTN9 838 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 OSER1Q9NX31 292 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.2□□□□□ -0.14
HMGN1-211ENST00000471260 ZNF510Q9Y2H8 683 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 PCDHGA5Q9Y5G8 931 aa14.2□□□□□ -0.14
HMGN1-211ENST00000471260 A0A1W2PQH9 124 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 GNA14O95837 355 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 TBX18O95935 607 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 KIR2DL1P43626 348 aaPredicted RBP14.19□□□□□ -0.14
HMGN1-211ENST00000471260 SLC6A11P48066 632 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 PXNP49023 591 aaPredicted RBP14.19□□□□□ -0.14
HMGN1-211ENST00000471260 FMO5P49326 533 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 COG7P83436 770 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 MAPK8IP2Q13387 824 aaPredicted RBP14.19□□□□□ -0.14
HMGN1-211ENST00000471260 MORC3Q14149 939 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 CRY1Q16526 586 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 RSPO4Q2I0M5 234 aaPredicted RBP14.19□□□□□ -0.14
HMGN1-211ENST00000471260 C2orf27AQ580R0 203 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 C10orf120Q5SQS8 335 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 TTI2Q6NXR4 508 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 TRMT11Q7Z4G4 463 aaKnown RBP14.19□□□□□ -0.14
HMGN1-211ENST00000471260 RASSF3Q86WH2 238 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 RNF214Q8ND24 703 aa14.19□□□□□ -0.14
HMGN1-211ENST00000471260 JAKMIP2Q96AA8 810 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms