RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 SERPINA13PQ6UXR4 307 aa5.96□□□□□ -1.46
PRPF40A-206ENST00000471167 RAB11FIP4Q86YS3 637 aa5.96□□□□□ -1.46
PRPF40A-206ENST00000471167 MAFAQ8NHW3 353 aaPredicted RBP5.96□□□□□ -1.46
PRPF40A-206ENST00000471167 RPL36ALQ969Q0 106 aaKnown RBP5.96□□□□□ -1.46
PRPF40A-206ENST00000471167 BRIP1Q9BX63 1249 aa5.96□□□□□ -1.46
PRPF40A-206ENST00000471167 FAM83DQ9H4H8 585 aa5.96□□□□□ -1.46
PRPF40A-206ENST00000471167 TBC1D23Q9NUY8 699 aa5.96□□□□□ -1.46
PRPF40A-206ENST00000471167 MGAT4CQ9UBM8 478 aa5.96□□□□□ -1.46
PRPF40A-206ENST00000471167 COL15A1P39059 1388 aa5.95□□□□□ -1.46
PRPF40A-206ENST00000471167 BTBD19C9JJ37 291 aa5.95□□□□□ -1.46
PRPF40A-206ENST00000471167 E5RJQ4 531 aa5.95□□□□□ -1.46
PRPF40A-206ENST00000471167 TPD52L2O43399 206 aaKnown RBP5.95□□□□□ -1.46
PRPF40A-206ENST00000471167 CBFA2T3O75081 653 aa5.95□□□□□ -1.46
PRPF40A-206ENST00000471167 GPC5P78333 572 aa5.95□□□□□ -1.46
PRPF40A-206ENST00000471167 ZNF543Q08ER8 600 aa5.95□□□□□ -1.46
PRPF40A-206ENST00000471167 LARS2Q15031 903 aaKnown RBP5.95□□□□□ -1.46
PRPF40A-206ENST00000471167 KLHDC7AQ5VTJ3 777 aa5.95□□□□□ -1.46
PRPF40A-206ENST00000471167 RRAGBQ5VZM2 374 aa5.95□□□□□ -1.46
PRPF40A-206ENST00000471167 ZNF813Q6ZN06 617 aa5.95□□□□□ -1.46
PRPF40A-206ENST00000471167 YAF2Q8IY57 180 aa5.95□□□□□ -1.46
PRPF40A-206ENST00000471167 ZDHHC12Q96GR4 267 aa5.95□□□□□ -1.46
PRPF40A-206ENST00000471167 HIST1H2AAQ96QV6 131 aa5.95□□□□□ -1.46
PRPF40A-206ENST00000471167 SEMA5BQ9P283 1151 aa5.95□□□□□ -1.46
PRPF40A-206ENST00000471167 CORO2BQ9UQ03 480 aa5.95□□□□□ -1.46
PRPF40A-206ENST00000471167 HPSEQ9Y251 543 aa5.95□□□□□ -1.46
PRPF40A-206ENST00000471167 AQP7P3A6NL99 342 aa5.94□□□□□ -1.46
PRPF40A-206ENST00000471167 C16orf96A6NNT2 1141 aa5.94□□□□□ -1.46
PRPF40A-206ENST00000471167 CA12O43570 354 aa5.94□□□□□ -1.46
PRPF40A-206ENST00000471167 PRAMEF2O60811 474 aa5.94□□□□□ -1.46
PRPF40A-206ENST00000471167 HOXD9P28356 352 aaPredicted RBP5.94□□□□□ -1.46
PRPF40A-206ENST00000471167 GORABQ5T7V8 394 aa5.94□□□□□ -1.46
PRPF40A-206ENST00000471167 CLEC9AQ6UXN8 241 aa5.94□□□□□ -1.46
PRPF40A-206ENST00000471167 MAP4K1Q92918 833 aa5.94□□□□□ -1.46
PRPF40A-206ENST00000471167 FAM227BQ96M60 508 aa5.94□□□□□ -1.46
PRPF40A-206ENST00000471167 UNKQ9C0B0 810 aaKnown RBP5.94□□□□□ -1.46
PRPF40A-206ENST00000471167 NUP62CLQ9H1M0 184 aa5.94□□□□□ -1.46
PRPF40A-206ENST00000471167 DNAJB11Q9UBS4 358 aa5.94□□□□□ -1.46
PRPF40A-206ENST00000471167 A8MVJ9 347 aa5.93□□□□□ -1.46
PRPF40A-206ENST00000471167 USP1O94782 785 aa5.93□□□□□ -1.46
PRPF40A-206ENST00000471167 ANXA2P07355 339 aaKnown RBP5.93□□□□□ -1.46
PRPF40A-206ENST00000471167 ARP10275 920 aa5.93□□□□□ -1.46
PRPF40A-206ENST00000471167 THBS4P35443 961 aa5.93□□□□□ -1.46
PRPF40A-206ENST00000471167 CASP5P51878 434 aa5.93□□□□□ -1.46
PRPF40A-206ENST00000471167 CFHR3Q02985 330 aa5.93□□□□□ -1.46
PRPF40A-206ENST00000471167 SLC14A1Q13336 389 aa5.93□□□□□ -1.46
PRPF40A-206ENST00000471167 DAG1Q14118 895 aa5.93□□□□□ -1.46
PRPF40A-206ENST00000471167 WIPF2Q8TF74 440 aaPredicted RBP5.93□□□□□ -1.46
PRPF40A-206ENST00000471167 CCDC17Q96LX7 622 aa5.93□□□□□ -1.46
PRPF40A-206ENST00000471167 FYTTD1Q96QD9 318 aaKnown RBP5.93□□□□□ -1.46
PRPF40A-206ENST00000471167 GDF15Q99988 308 aa5.93□□□□□ -1.46
PRPF40A-206ENST00000471167 MLXIPLQ9NP71 852 aa5.93□□□□□ -1.46
PRPF40A-206ENST00000471167 VPS45Q9NRW7 570 aa5.93□□□□□ -1.46
PRPF40A-206ENST00000471167 TFCP2L1Q9NZI6 479 aa5.93□□□□□ -1.46
PRPF40A-206ENST00000471167 ZNF212Q9UDV6 495 aa5.93□□□□□ -1.46
PRPF40A-206ENST00000471167 A0A0U1RQG5 324 aaPredicted RBP5.92□□□□□ -1.46
PRPF40A-206ENST00000471167 UBE2Q2LH0YL09 131 aa5.92□□□□□ -1.46
PRPF40A-206ENST00000471167 KPNA5O15131 536 aa5.92□□□□□ -1.46
PRPF40A-206ENST00000471167 PQBP1O60828 265 aaKnown RBP5.92□□□□□ -1.46
PRPF40A-206ENST00000471167 TSHRP16473 764 aa5.92□□□□□ -1.46
PRPF40A-206ENST00000471167 RPL17P18621 184 aaKnown RBP5.92□□□□□ -1.46
PRPF40A-206ENST00000471167 LIX1LQ8IVB5 337 aa5.92□□□□□ -1.46
PRPF40A-206ENST00000471167 C12orf76Q8N812 135 aaPredicted RBP5.92□□□□□ -1.46
PRPF40A-206ENST00000471167 SUN3Q8TAQ9 357 aa5.92□□□□□ -1.46
PRPF40A-206ENST00000471167 COQ8BQ96D53 544 aa5.92□□□□□ -1.46
PRPF40A-206ENST00000471167 SAP30LQ9HAJ7 183 aa5.92□□□□□ -1.46
PRPF40A-206ENST00000471167 NRIP3Q9NQ35 241 aa5.92□□□□□ -1.46
PRPF40A-206ENST00000471167 NKX1-2Q9UD57 310 aaPredicted RBP5.92□□□□□ -1.46
PRPF40A-206ENST00000471167 FZD4Q9ULV1 537 aa5.92□□□□□ -1.46
PRPF40A-206ENST00000471167 CLIC1O00299 241 aa5.91□□□□□ -1.46
PRPF40A-206ENST00000471167 ADAM10O14672 748 aa5.91□□□□□ -1.46
PRPF40A-206ENST00000471167 PPEF2O14830 753 aa5.91□□□□□ -1.46
PRPF40A-206ENST00000471167 TMPRSS11DO60235 418 aa5.91□□□□□ -1.46
PRPF40A-206ENST00000471167 GCATO75600 419 aa5.91□□□□□ -1.46
PRPF40A-206ENST00000471167 IL18RAPO95256 599 aa5.91□□□□□ -1.46
PRPF40A-206ENST00000471167 ACOX1Q15067 660 aa5.91□□□□□ -1.46
PRPF40A-206ENST00000471167 TMTC4Q5T4D3 741 aa5.91□□□□□ -1.46
PRPF40A-206ENST00000471167 MIS18BP1Q6P0N0 1132 aa5.91□□□□□ -1.46
PRPF40A-206ENST00000471167 DCDC5Q6ZRR9 648 aa5.91□□□□□ -1.46
PRPF40A-206ENST00000471167 KIAA0408Q6ZU52 694 aa5.91□□□□□ -1.46
PRPF40A-206ENST00000471167 RNF44Q7L0R7 432 aa5.91□□□□□ -1.46
PRPF40A-206ENST00000471167 KRT28Q7Z3Y7 464 aa5.91□□□□□ -1.46
PRPF40A-206ENST00000471167 PIP4P1Q86T03 277 aa5.91□□□□□ -1.46
PRPF40A-206ENST00000471167 CNGA4Q8IV77 575 aa5.91□□□□□ -1.46
PRPF40A-206ENST00000471167 PNPLA1Q8N8W4 532 aa5.91□□□□□ -1.46
PRPF40A-206ENST00000471167 C9orf106Q8NAJ2 232 aa5.91□□□□□ -1.46
PRPF40A-206ENST00000471167 ATP11CQ8NB49 1132 aa5.91□□□□□ -1.46
PRPF40A-206ENST00000471167 VPS16Q9H269 839 aa5.91□□□□□ -1.46
PRPF40A-206ENST00000471167 TMEM8AQ9HCN3 771 aa5.91□□□□□ -1.46
PRPF40A-206ENST00000471167 SLC52A1Q9NWF4 448 aa5.91□□□□□ -1.46
PRPF40A-206ENST00000471167 RHPN2P1A8MT19 583 aa5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 TMEM232C9JQI7 657 aa5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 APAF1O14727 1248 aa5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 FYB1O15117 783 aa5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 KCNQ3O43525 872 aa5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 RBL1P28749 1068 aa5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 ATICP31939 592 aa5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 PRIM2P49643 509 aa5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 MTHFSP49914 203 aa5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 EIF4A1P60842 406 aaKnown RBP5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 CFHR1Q03591 330 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms