RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 C3orf20Q8ND61 904 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 EXD1Q8NHP7 514 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 HDAC7Q8WUI4 952 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 NUDT8Q8WV74 236 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 CASKIN2Q8WXE0 1202 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 KAT5Q92993 513 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 UHRF1Q96T88 793 aaPredicted RBP5.97□□□□□ -1.45
HDAC8-216ENST00000470998 PCDHB18PQ96TA0 734 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 YME1L1Q96TA2 773 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 FTHL17Q9BXU8 183 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 BCO2Q9BYV7 579 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 LRRC19Q9H756 370 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 FAM204AQ9H8W3 233 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 PPCSQ9HAB8 311 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 SUGCTQ9HAC7 445 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 PLEKHA5Q9HAU0 1116 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 TOPORSQ9NS56 1045 aaPredicted RBP5.97□□□□□ -1.45
HDAC8-216ENST00000470998 DDX56Q9NY93 547 aaKnown RBP5.97□□□□□ -1.45
HDAC8-216ENST00000470998 ADAM22Q9P0K1 906 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 ZFATQ9P243 1243 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 ANAPC7Q9UJX3 599 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 ITGA11Q9UKX5 1188 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 NFU1Q9UMS0 254 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 FAN1Q9Y2M0 1017 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 PCDHB4Q9Y5E5 795 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 KCNMB2Q9Y691 235 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 KIAA1217Q5T5P2 1943 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 COL6A3P12111 3177 aa5.97□□□□□ -1.45
HDAC8-216ENST00000470998 TANC1Q9C0D5 1861 aa5.96□□□□□ -1.45
HDAC8-216ENST00000470998 COL4A6Q14031 1691 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 SMIM35A0A1B0GVV1 85 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 LCHNA4D1U4 455 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 EPOPA6NHQ4 379 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 C5orf67F2Z3F1 127 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 M0QZ92 97 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 AGPSO00116 658 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 RFXAPO00287 272 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 LPXNO60711 386 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 VNN1O95497 513 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 SETSIPP0DME0 302 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 ATF7P17544 494 aaPredicted RBP5.96□□□□□ -1.46
HDAC8-216ENST00000470998 MZF1P28698 734 aaPredicted RBP5.96□□□□□ -1.46
HDAC8-216ENST00000470998 ATP5DP30049 168 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 ECHS1P30084 290 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 AXLP30530 894 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 LMAN1P49257 510 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 DNA2P51530 1060 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 NRLP54845 237 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 GPLD1P80108 840 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 SLC7A5Q01650 507 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 TCTN1Q2MV58 587 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 TIGD5Q53EQ6 642 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 PRRT3Q5FWE3 981 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 ZNF667Q5HYK9 610 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 AGBL2Q5U5Z8 902 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 DCAF12L1Q5VU92 463 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 NAA35Q5VZE5 725 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 EFCAB12Q6NXP0 572 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 DNAJC24Q6P3W2 148 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 CCDC137Q6PK04 289 aaKnown RBP5.96□□□□□ -1.46
HDAC8-216ENST00000470998 KDM7AQ6ZMT4 941 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.96□□□□□ -1.46
HDAC8-216ENST00000470998 TRMT10CQ7L0Y3 403 aaKnown RBP5.96□□□□□ -1.46
HDAC8-216ENST00000470998 TRMT1LQ7Z2T5 733 aaKnown RBP5.96□□□□□ -1.46
HDAC8-216ENST00000470998 TMC3Q7Z5M5 1100 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 ALYREFQ86V81 257 aaKnown RBP5.96□□□□□ -1.46
HDAC8-216ENST00000470998 VSIG1Q86XK7 387 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 RHPN2Q8IUC4 686 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 ZSWIM2Q8NEG5 633 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 IFT81Q8WYA0 676 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 ALG3Q92685 438 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 MAGOHBQ96A72 148 aaKnown RBP5.96□□□□□ -1.46
HDAC8-216ENST00000470998 SPACA7Q96KW9 195 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 NSUN5Q96P11 429 aaKnown RBP5.96□□□□□ -1.46
HDAC8-216ENST00000470998 ZIM3Q96PE6 472 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 POP1Q99575 1024 aaKnown RBP5.96□□□□□ -1.46
HDAC8-216ENST00000470998 TMEM109Q9BVC6 243 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 DDX47Q9H0S4 455 aaKnown RBP5.96□□□□□ -1.46
HDAC8-216ENST00000470998 LMAN2LQ9H0V9 348 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 CDT1Q9H211 546 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 CNOT10Q9H9A5 744 aaKnown RBP5.96□□□□□ -1.46
HDAC8-216ENST00000470998 CERS4Q9HA82 394 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 APOBEC3GQ9HC16 384 aaKnown RBP5.96□□□□□ -1.46
HDAC8-216ENST00000470998 EHD2Q9NZN4 543 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 WHRNQ9P202 907 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 EGFL7Q9UHF1 273 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 AMACRQ9UHK6 382 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 TRPV2Q9Y5S1 764 aa5.96□□□□□ -1.46
HDAC8-216ENST00000470998 SIP14410 1827 aa5.95□□□□□ -1.46
HDAC8-216ENST00000470998 ARID2Q68CP9 1835 aa5.95□□□□□ -1.46
HDAC8-216ENST00000470998 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.95□□□□□ -1.46
HDAC8-216ENST00000470998 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.95□□□□□ -1.46
HDAC8-216ENST00000470998 H3BNC9 293 aa5.95□□□□□ -1.46
HDAC8-216ENST00000470998 TTI1O43156 1089 aa5.95□□□□□ -1.46
HDAC8-216ENST00000470998 MMP20O60882 483 aa5.95□□□□□ -1.46
HDAC8-216ENST00000470998 TJP3O95049 919 aa5.95□□□□□ -1.46
HDAC8-216ENST00000470998 CHRNA1P02708 482 aa5.95□□□□□ -1.46
HDAC8-216ENST00000470998 ERBB2P04626 1255 aa5.95□□□□□ -1.46
HDAC8-216ENST00000470998 KRT7P08729 469 aa5.95□□□□□ -1.46
HDAC8-216ENST00000470998 CTSHP09668 335 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms