RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 NKX1-2Q9UD57 310 aaPredicted RBP6.35□□□□□ -1.39
COL11A1-208ENST00000470170 VSTM5A8MXK1 200 aa6.34□□□□□ -1.39
COL11A1-208ENST00000470170 CLIC1O00299 241 aa6.34□□□□□ -1.39
COL11A1-208ENST00000470170 GOLIM4O00461 696 aa6.34□□□□□ -1.39
COL11A1-208ENST00000470170 TSPAN6O43657 245 aa6.34□□□□□ -1.39
COL11A1-208ENST00000470170 CYP19A1P11511 503 aaPredicted RBP6.34□□□□□ -1.39
COL11A1-208ENST00000470170 PRF1P14222 555 aa6.34□□□□□ -1.39
COL11A1-208ENST00000470170 BTF3P20290 206 aaKnown RBP6.34□□□□□ -1.39
COL11A1-208ENST00000470170 PEX2P28328 305 aa6.34□□□□□ -1.39
COL11A1-208ENST00000470170 CFHR3Q02985 330 aa6.34□□□□□ -1.39
COL11A1-208ENST00000470170 SLC14A1Q13336 389 aa6.34□□□□□ -1.39
COL11A1-208ENST00000470170 FHL1Q13642 323 aa6.34□□□□□ -1.39
COL11A1-208ENST00000470170 CC2D1BQ5T0F9 858 aaKnown RBP6.34□□□□□ -1.39
COL11A1-208ENST00000470170 C10orf25Q5T742 122 aa6.34□□□□□ -1.39
COL11A1-208ENST00000470170 PLAG1Q6DJT9 500 aa6.34□□□□□ -1.39
COL11A1-208ENST00000470170 VSTM1Q6UX27 236 aa6.34□□□□□ -1.39
COL11A1-208ENST00000470170 CLEC9AQ6UXN8 241 aa6.34□□□□□ -1.39
COL11A1-208ENST00000470170 IRF2BP2Q7Z5L9 587 aa6.34□□□□□ -1.39
COL11A1-208ENST00000470170 MRPL10Q7Z7H8 261 aaKnown RBP6.34□□□□□ -1.39
COL11A1-208ENST00000470170 ZNF668Q96K58 619 aaPredicted RBP6.34□□□□□ -1.39
COL11A1-208ENST00000470170 HIST1H2AAQ96QV6 131 aa6.34□□□□□ -1.39
COL11A1-208ENST00000470170 SIGLEC11Q96RL6 698 aa6.34□□□□□ -1.39
COL11A1-208ENST00000470170 WACQ9BTA9 647 aa6.34□□□□□ -1.39
COL11A1-208ENST00000470170 TMEM184CQ9NVA4 438 aa6.34□□□□□ -1.39
COL11A1-208ENST00000470170 GAR1Q9NY12 217 aaKnown RBP6.34□□□□□ -1.39
COL11A1-208ENST00000470170 A8MVJ9 347 aa6.33□□□□□ -1.4
COL11A1-208ENST00000470170 TRIM38O00635 465 aa6.33□□□□□ -1.4
COL11A1-208ENST00000470170 MGEA5O60502 916 aa6.33□□□□□ -1.4
COL11A1-208ENST00000470170 ZBED1O96006 694 aa6.33□□□□□ -1.4
COL11A1-208ENST00000470170 CD19P15391 556 aa6.33□□□□□ -1.4
COL11A1-208ENST00000470170 POLGP54098 1239 aaPredicted RBP6.33□□□□□ -1.4
COL11A1-208ENST00000470170 TRIM71Q2Q1W2 868 aaKnown RBP6.33□□□□□ -1.4
COL11A1-208ENST00000470170 CHST15Q7LFX5 561 aaPredicted RBP6.33□□□□□ -1.4
COL11A1-208ENST00000470170 SRGAP1Q7Z6B7 1085 aa6.33□□□□□ -1.4
COL11A1-208ENST00000470170 MYO1HQ8N1T3 1032 aa6.33□□□□□ -1.4
COL11A1-208ENST00000470170 C12orf76Q8N812 135 aaPredicted RBP6.33□□□□□ -1.4
COL11A1-208ENST00000470170 KAZALD1Q96I82 304 aa6.33□□□□□ -1.4
COL11A1-208ENST00000470170 FAM83DQ9H4H8 585 aa6.33□□□□□ -1.4
COL11A1-208ENST00000470170 USP29Q9HBJ7 922 aa6.33□□□□□ -1.4
COL11A1-208ENST00000470170 PI4KBQ9UBF8 816 aa6.33□□□□□ -1.4
COL11A1-208ENST00000470170 DNAJB11Q9UBS4 358 aa6.33□□□□□ -1.4
COL11A1-208ENST00000470170 STEAP1Q9UHE8 339 aa6.33□□□□□ -1.4
COL11A1-208ENST00000470170 TCEAL9Q9UHQ7 104 aa6.33□□□□□ -1.4
COL11A1-208ENST00000470170 VPS51Q9UID3 782 aa6.33□□□□□ -1.4
COL11A1-208ENST00000470170 G3BP2Q9UN86 482 aaKnown RBP6.33□□□□□ -1.4
COL11A1-208ENST00000470170 SLC27A6Q9Y2P4 619 aa6.33□□□□□ -1.4
COL11A1-208ENST00000470170 CACNA1IQ9P0X4 2223 aa6.32□□□□□ -1.4
COL11A1-208ENST00000470170 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.32□□□□□ -1.4
COL11A1-208ENST00000470170 IKBKBO14920 756 aa6.32□□□□□ -1.4
COL11A1-208ENST00000470170 FYB1O15117 783 aa6.32□□□□□ -1.4
COL11A1-208ENST00000470170 CA12O43570 354 aa6.32□□□□□ -1.4
COL11A1-208ENST00000470170 INMTO95050 263 aa6.32□□□□□ -1.4
COL11A1-208ENST00000470170 HRGP04196 525 aa6.32□□□□□ -1.4
COL11A1-208ENST00000470170 YY1P25490 414 aa6.32□□□□□ -1.4
COL11A1-208ENST00000470170 THBS4P35443 961 aa6.32□□□□□ -1.4
COL11A1-208ENST00000470170 YPEL5P62699 121 aa6.32□□□□□ -1.4
COL11A1-208ENST00000470170 FAM193AP78312 1265 aa6.32□□□□□ -1.4
COL11A1-208ENST00000470170 GPC5P78333 572 aa6.32□□□□□ -1.4
COL11A1-208ENST00000470170 CFHR1Q03591 330 aa6.32□□□□□ -1.4
COL11A1-208ENST00000470170 ST3GAL2Q16842 350 aa6.32□□□□□ -1.4
COL11A1-208ENST00000470170 TMEM63BQ5T3F8 832 aa6.32□□□□□ -1.4
COL11A1-208ENST00000470170 MANEALQ5VSG8 457 aa6.32□□□□□ -1.4
COL11A1-208ENST00000470170 PNPLA1Q8N8W4 532 aa6.32□□□□□ -1.4
COL11A1-208ENST00000470170 NGDNQ8NEJ9 315 aaKnown RBP6.32□□□□□ -1.4
COL11A1-208ENST00000470170 AS3MTQ9HBK9 375 aa6.32□□□□□ -1.4
COL11A1-208ENST00000470170 RGS17Q9UGC6 210 aaPredicted RBP6.32□□□□□ -1.4
COL11A1-208ENST00000470170 FRMPD2Q68DX3 1309 aaPredicted RBP6.31□□□□□ -1.4
COL11A1-208ENST00000470170 LY6G6EA0A0G2JKS1 128 aa6.31□□□□□ -1.4
COL11A1-208ENST00000470170 F8W8V4 182 aa6.31□□□□□ -1.4
COL11A1-208ENST00000470170 SNX2O60749 519 aa6.31□□□□□ -1.4
COL11A1-208ENST00000470170 PRAMEF2O60811 474 aa6.31□□□□□ -1.4
COL11A1-208ENST00000470170 ADRA1DP25100 572 aa6.31□□□□□ -1.4
COL11A1-208ENST00000470170 RBL1P28749 1068 aa6.31□□□□□ -1.4
COL11A1-208ENST00000470170 KRTAP10-9P60411 292 aa6.31□□□□□ -1.4
COL11A1-208ENST00000470170 EIF4A1P60842 406 aaKnown RBP6.31□□□□□ -1.4
COL11A1-208ENST00000470170 C16orf71Q8IYS4 520 aaPredicted RBP6.31□□□□□ -1.4
COL11A1-208ENST00000470170 MSLNLQ96KJ4 702 aa6.31□□□□□ -1.4
COL11A1-208ENST00000470170 SNX22Q96L94 193 aa6.31□□□□□ -1.4
COL11A1-208ENST00000470170 TBC1D23Q9NUY8 699 aa6.31□□□□□ -1.4
COL11A1-208ENST00000470170 ZNF212Q9UDV6 495 aa6.31□□□□□ -1.4
COL11A1-208ENST00000470170 HPSEQ9Y251 543 aa6.31□□□□□ -1.4
COL11A1-208ENST00000470170 PCDHGB6Q9Y5F9 930 aa6.31□□□□□ -1.4
COL11A1-208ENST00000470170 MT-ND5P03915 603 aa6.3□□□□□ -1.4
COL11A1-208ENST00000470170 COPAP53621 1224 aa6.3□□□□□ -1.4
COL11A1-208ENST00000470170 FOXG1P55316 489 aaPredicted RBP6.3□□□□□ -1.4
COL11A1-208ENST00000470170 TXNL4AP83876 142 aaKnown RBP6.3□□□□□ -1.4
COL11A1-208ENST00000470170 ID2Q02363 134 aa6.3□□□□□ -1.4
COL11A1-208ENST00000470170 GALEQ14376 348 aa6.3□□□□□ -1.4
COL11A1-208ENST00000470170 GBX1Q14549 363 aa6.3□□□□□ -1.4
COL11A1-208ENST00000470170 IPCEF1Q8WWN9 437 aaPredicted RBP6.3□□□□□ -1.4
COL11A1-208ENST00000470170 TSR2Q969E8 191 aaKnown RBP6.3□□□□□ -1.4
COL11A1-208ENST00000470170 HIC2Q96JB3 615 aa6.3□□□□□ -1.4
COL11A1-208ENST00000470170 VPS50Q96JG6 964 aa6.3□□□□□ -1.4
COL11A1-208ENST00000470170 FOXP1Q9H334 677 aaPredicted RBP6.3□□□□□ -1.4
COL11A1-208ENST00000470170 FZD4Q9ULV1 537 aa6.3□□□□□ -1.4
COL11A1-208ENST00000470170 HTR7P34969 479 aa6.29□□□□□ -1.4
COL11A1-208ENST00000470170 LINC00205P59089 165 aa6.29□□□□□ -1.4
COL11A1-208ENST00000470170 KPNB1Q14974 876 aaKnown RBP6.29□□□□□ -1.4
COL11A1-208ENST00000470170 GRHL2Q6ISB3 625 aa6.29□□□□□ -1.4
COL11A1-208ENST00000470170 ANO7Q6IWH7 933 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms