RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 TTC16Q8NEE8 873 aa18.59■□□□□ 0.57
MRPL28-208ENST00000469744 FAM3CQ92520 227 aa18.59■□□□□ 0.57
MRPL28-208ENST00000469744 MYRFLQ96LU7 910 aa18.59■□□□□ 0.57
MRPL28-208ENST00000469744 SLC22A12Q96S37 553 aa18.59■□□□□ 0.57
MRPL28-208ENST00000469744 B3GNT5Q9BYG0 378 aa18.59■□□□□ 0.57
MRPL28-208ENST00000469744 OSBPL6Q9BZF3 934 aa18.59■□□□□ 0.57
MRPL28-208ENST00000469744 VRTNQ9H8Y1 702 aa18.59■□□□□ 0.57
MRPL28-208ENST00000469744 SIX2Q9NPC8 291 aa18.59■□□□□ 0.57
MRPL28-208ENST00000469744 OBP2AQ9NY56 170 aa18.59■□□□□ 0.57
MRPL28-208ENST00000469744 MRPS17Q9Y2R5 130 aaKnown RBP18.59■□□□□ 0.57
MRPL28-208ENST00000469744 MAN2B1O00754 1011 aa18.58■□□□□ 0.57
MRPL28-208ENST00000469744 PMM2O15305 246 aa18.58■□□□□ 0.57
MRPL28-208ENST00000469744 HLA-DRAP01903 254 aa18.58■□□□□ 0.57
MRPL28-208ENST00000469744 WEE1P30291 646 aa18.58■□□□□ 0.57
MRPL28-208ENST00000469744 GCLMP48507 274 aa18.58■□□□□ 0.57
MRPL28-208ENST00000469744 JAM2P57087 298 aa18.58■□□□□ 0.57
MRPL28-208ENST00000469744 ENPEPQ07075 957 aa18.58■□□□□ 0.57
MRPL28-208ENST00000469744 KLHL30Q0D2K2 578 aa18.58■□□□□ 0.57
MRPL28-208ENST00000469744 RAPGEF1Q13905 1077 aa18.58■□□□□ 0.57
MRPL28-208ENST00000469744 SLC18A3Q16572 532 aa18.58■□□□□ 0.57
MRPL28-208ENST00000469744 TDRD12Q587J7 1177 aaKnown RBP18.58■□□□□ 0.57
MRPL28-208ENST00000469744 MON1AQ86VX9 555 aa18.58■□□□□ 0.57
MRPL28-208ENST00000469744 MAML2Q8IZL2 1156 aaPredicted RBP18.58■□□□□ 0.57
MRPL28-208ENST00000469744 ZNF687Q8N1G0 1237 aa18.58■□□□□ 0.57
MRPL28-208ENST00000469744 CELF5Q8N6W0 485 aaKnown RBP18.58■□□□□ 0.57
MRPL28-208ENST00000469744 CYP2S1Q96SQ9 504 aa18.58■□□□□ 0.57
MRPL28-208ENST00000469744 HMGXB4Q9UGU5 601 aa18.58■□□□□ 0.57
MRPL28-208ENST00000469744 R4GN57 208 aa18.58■□□□□ 0.57
MRPL28-208ENST00000469744 CFAP54Q96N23 3096 aa18.58■□□□□ 0.57
MRPL28-208ENST00000469744 MYH10P35580 1976 aa18.58■□□□□ 0.56
MRPL28-208ENST00000469744 C2orf78A6NCI8 922 aa18.58■□□□□ 0.56
MRPL28-208ENST00000469744 BTNL10A8MVZ5 291 aa18.58■□□□□ 0.56
MRPL28-208ENST00000469744 TUBBP07437 444 aa18.58■□□□□ 0.56
MRPL28-208ENST00000469744 FAM163BP0C2L3 166 aa18.58■□□□□ 0.56
MRPL28-208ENST00000469744 KRT13P13646 458 aa18.58■□□□□ 0.56
MRPL28-208ENST00000469744 DDX6P26196 483 aaKnown RBP eCLIP18.58■□□□□ 0.562e-7■■■□□ 16.6
MRPL28-208ENST00000469744 PPP3CAQ08209 521 aa18.58■□□□□ 0.56
MRPL28-208ENST00000469744 FBXO38Q6PIJ6 1188 aa18.58■□□□□ 0.56
MRPL28-208ENST00000469744 ASCL5Q7RTU5 278 aa18.58■□□□□ 0.56
MRPL28-208ENST00000469744 IRF2BP2Q7Z5L9 587 aa18.58■□□□□ 0.56
MRPL28-208ENST00000469744 CLDN23Q96B33 292 aa18.58■□□□□ 0.56
MRPL28-208ENST00000469744 SPATA17Q96L03 361 aa18.58■□□□□ 0.56
MRPL28-208ENST00000469744 SPAG5Q96R06 1193 aa18.58■□□□□ 0.56
MRPL28-208ENST00000469744 NELL2Q99435 816 aa18.58■□□□□ 0.56
MRPL28-208ENST00000469744 TDP1Q9NUW8 608 aa18.58■□□□□ 0.56
MRPL28-208ENST00000469744 GCNT4Q9P109 453 aa18.58■□□□□ 0.56
MRPL28-208ENST00000469744 JRKLQ9Y4A0 524 aa18.58■□□□□ 0.56
MRPL28-208ENST00000469744 SAR1BQ9Y6B6 198 aa18.58■□□□□ 0.56
MRPL28-208ENST00000469744 HELZP42694 1942 aaKnown RBP18.57■□□□□ 0.56
MRPL28-208ENST00000469744 PROB1E7EW31 1015 aa18.57■□□□□ 0.56
MRPL28-208ENST00000469744 TRIM66O15016 1216 aa18.57■□□□□ 0.56
MRPL28-208ENST00000469744 ASS1P00966 412 aaKnown RBP18.57■□□□□ 0.56
MRPL28-208ENST00000469744 SP9P0CG40 484 aa18.57■□□□□ 0.56
MRPL28-208ENST00000469744 FERP16591 822 aa18.57■□□□□ 0.56
MRPL28-208ENST00000469744 CKAP4Q07065 602 aaKnown RBP18.57■□□□□ 0.56
MRPL28-208ENST00000469744 IFRD2Q12894 506 aaPredicted RBP18.57■□□□□ 0.56
MRPL28-208ENST00000469744 SGSM1Q2NKQ1 1148 aa18.57■□□□□ 0.56
MRPL28-208ENST00000469744 TRIM68Q6AZZ1 485 aa18.57■□□□□ 0.56
MRPL28-208ENST00000469744 TXNDC11Q6PKC3 985 aa18.57■□□□□ 0.56
MRPL28-208ENST00000469744 DENND5BQ6ZUT9 1274 aa18.57■□□□□ 0.56
MRPL28-208ENST00000469744 ACOT1Q86TX2 421 aa18.57■□□□□ 0.56
MRPL28-208ENST00000469744 TAS1R2Q8TE23 839 aa18.57■□□□□ 0.56
MRPL28-208ENST00000469744 ALS2CR12Q96Q35 445 aa18.57■□□□□ 0.56
MRPL28-208ENST00000469744 ELOVL4Q9GZR5 314 aa18.57■□□□□ 0.56
MRPL28-208ENST00000469744 GKN1Q9NS71 199 aa18.57■□□□□ 0.56
MRPL28-208ENST00000469744 FHOD1Q9Y613 1164 aa18.57■□□□□ 0.56
MRPL28-208ENST00000469744 FRYLO94915 3013 aa18.57■□□□□ 0.56
MRPL28-208ENST00000469744 FAM186AA6NE01 2351 aa18.56■□□□□ 0.56
MRPL28-208ENST00000469744 FANCMQ8IYD8 2048 aa18.56■□□□□ 0.56
MRPL28-208ENST00000469744 CTAGE15A4D2H0 777 aa18.56■□□□□ 0.56
MRPL28-208ENST00000469744 SPECC1L-ADORA2AF8WAN1 911 aa18.56■□□□□ 0.56
MRPL28-208ENST00000469744 NCAM2O15394 837 aa18.56■□□□□ 0.56
MRPL28-208ENST00000469744 LAMTOR5O43504 91 aa18.56■□□□□ 0.56
MRPL28-208ENST00000469744 CKMP06732 381 aa18.56■□□□□ 0.56
MRPL28-208ENST00000469744 CTAGE8P0CG41 777 aa18.56■□□□□ 0.56
MRPL28-208ENST00000469744 ASPAP45381 313 aa18.56■□□□□ 0.56
MRPL28-208ENST00000469744 GFPT1Q06210 699 aaPredicted RBP18.56■□□□□ 0.56
MRPL28-208ENST00000469744 CTAGE6Q86UF2 777 aa18.56■□□□□ 0.56
MRPL28-208ENST00000469744 CTAGE4Q8IX94 777 aa18.56■□□□□ 0.56
MRPL28-208ENST00000469744 ARL14EPQ8N8R7 260 aaPredicted RBP18.56■□□□□ 0.56
MRPL28-208ENST00000469744 MED10Q9BTT4 135 aa18.56■□□□□ 0.56
MRPL28-208ENST00000469744 STK33Q9BYT3 514 aa18.56■□□□□ 0.56
MRPL28-208ENST00000469744 APOBEC3GQ9HC16 384 aaKnown RBP18.56■□□□□ 0.56
MRPL28-208ENST00000469744 THG1LQ9NWX6 298 aaKnown RBP18.56■□□□□ 0.56
MRPL28-208ENST00000469744 ZMYM5Q9UJ78 669 aa18.56■□□□□ 0.56
MRPL28-208ENST00000469744 PTPRZ1P23471 2315 aaPredicted RBP18.56■□□□□ 0.56
MRPL28-208ENST00000469744 TRAV19A0A0A6YYK7 116 aa18.55■□□□□ 0.56
MRPL28-208ENST00000469744 PRR23AA6NEV1 266 aa18.55■□□□□ 0.56
MRPL28-208ENST00000469744 ATP8B1O43520 1251 aa18.55■□□□□ 0.56
MRPL28-208ENST00000469744 P4HA1P13674 534 aa18.55■□□□□ 0.56
MRPL28-208ENST00000469744 ARSAP15289 507 aa18.55■□□□□ 0.56
MRPL28-208ENST00000469744 CTHP32929 405 aa18.55■□□□□ 0.56
MRPL28-208ENST00000469744 STAT1P42224 750 aa18.55■□□□□ 0.56
MRPL28-208ENST00000469744 RPS9P46781 194 aaKnown RBP18.55■□□□□ 0.56
MRPL28-208ENST00000469744 NDST1P52848 882 aa18.55■□□□□ 0.56
MRPL28-208ENST00000469744 MTAPQ13126 283 aa18.55■□□□□ 0.56
MRPL28-208ENST00000469744 WDR44Q5JSH3 913 aa18.55■□□□□ 0.56
MRPL28-208ENST00000469744 TEX35Q5T0J7 233 aa18.55■□□□□ 0.56
MRPL28-208ENST00000469744 TSSK4Q6SA08 328 aa18.55■□□□□ 0.56
MRPL28-208ENST00000469744 FAM35AQ86V20 835 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms