RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 PRAMEF4O60810 478 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 IL33O95760 270 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 GH1P01241 217 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 JUNP05412 331 aaKnown RBP6.99□□□□□ -1.29
PTCD3-208ENST00000469585 TGFB3P10600 412 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 CPA1P15085 419 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 IFNAR1P17181 557 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 PDIA3P30101 505 aaKnown RBP6.99□□□□□ -1.29
PTCD3-208ENST00000469585 HOXA13P31271 388 aaPredicted RBP6.99□□□□□ -1.29
PTCD3-208ENST00000469585 HSD17B4P51659 736 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 SLC16A1P53985 500 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 EPHB4P54760 987 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 WNT3AP56704 352 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 BPIFB4P59827 614 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 PPP2CBP62714 309 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 PPP2CAP67775 309 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 HMGN5P82970 282 aaKnown RBP6.99□□□□□ -1.29
PTCD3-208ENST00000469585 MGAT2Q10469 447 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 NEDD9Q14511 834 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 PFKFB3Q16875 520 aaPredicted RBP6.99□□□□□ -1.29
PTCD3-208ENST00000469585 MST1LQ2TV78 715 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 GAGE13Q4V321 117 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 PRAMEF19Q5SWL8 479 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 FAM102BQ5T8I3 360 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 FBXO16Q8IX29 292 aaPredicted RBP6.99□□□□□ -1.29
PTCD3-208ENST00000469585 ANKRD53Q8N9V6 530 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 GPHA2Q96T91 129 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 SDF4Q9BRK5 362 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 SENP6Q9GZR1 1112 aaPredicted RBP6.99□□□□□ -1.29
PTCD3-208ENST00000469585 CSRNP2Q9H175 543 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 ALDH8A1Q9H2A2 487 aaPredicted RBP6.99□□□□□ -1.29
PTCD3-208ENST00000469585 SEC61A2Q9H9S3 476 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 RIC8AQ9NPQ8 531 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 STARD7Q9NQZ5 370 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 PXMP2Q9NR77 195 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 BARHL2Q9NY43 387 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 FLRT1Q9NZU1 646 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 OGDHLQ9ULD0 1010 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 DNM3Q9UQ16 869 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 IPPQ9Y573 584 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.99□□□□□ -1.29
PTCD3-208ENST00000469585 ZSWIM8A7E2V4 1837 aa6.99□□□□□ -1.29
PTCD3-208ENST00000469585 PLXNA1Q9UIW2 1896 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 RBBP6Q7Z6E9 1792 aaKnown RBP6.98□□□□□ -1.29
PTCD3-208ENST00000469585 RLFQ13129 1914 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 A0A0U1RQG5 324 aaPredicted RBP6.98□□□□□ -1.29
PTCD3-208ENST00000469585 CCDC194A0A1B0GVG4 234 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 FIBPO43427 364 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 HTRA2O43464 458 aaPredicted RBP6.98□□□□□ -1.29
PTCD3-208ENST00000469585 AKR1B10O60218 316 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 PHF2O75151 1096 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 AKAP5P24588 427 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 AK2P54819 239 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 RAC3P60763 192 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 SETQ01105 290 aaPredicted RBP6.98□□□□□ -1.29
PTCD3-208ENST00000469585 SURF1Q15526 300 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 DUSP28Q4G0W2 176 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 GJC2Q5T442 439 aaPredicted RBP6.98□□□□□ -1.29
PTCD3-208ENST00000469585 ANO1Q5XXA6 986 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 NXNQ6DKJ4 435 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 ARHGEF18Q6ZSZ5 1173 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 Q6ZVL8 140 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 FRMD5Q7Z6J6 570 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 KRTAP19-1Q8IUB9 90 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 TPH2Q8IWU9 490 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 MIER2Q8N344 545 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 LILRA3Q8N6C8 439 aaPredicted RBP6.98□□□□□ -1.29
PTCD3-208ENST00000469585 RABGGTAQ92696 567 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 NEIL1Q96FI4 390 aaPredicted RBP6.98□□□□□ -1.29
PTCD3-208ENST00000469585 RPL10LQ96L21 214 aaKnown RBP6.98□□□□□ -1.29
PTCD3-208ENST00000469585 AGXT2Q9BYV1 514 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 MEGF9Q9H1U4 602 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 TLR9Q9NR96 1032 aa6.98□□□□□ -1.29
PTCD3-208ENST00000469585 ORC3Q9UBD5 711 aaPredicted RBP6.98□□□□□ -1.29
PTCD3-208ENST00000469585 PUF60Q9UHX1 559 aaKnown RBP6.98□□□□□ -1.29
PTCD3-208ENST00000469585 ZNF215Q9UL58 517 aaPredicted RBP6.98□□□□□ -1.29
PTCD3-208ENST00000469585 ZNFX1Q9P2E3 1918 aaKnown RBP6.97□□□□□ -1.29
PTCD3-208ENST00000469585 hCG_1642624A0A1W2PR95 340 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 ESYT2A0FGR8 921 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 H3BQV1 296 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 SLC26A4O43511 780 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 CYTH3O43739 400 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 PFKFB2O60825 505 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 BAG4O95429 457 aaKnown RBP6.97□□□□□ -1.29
PTCD3-208ENST00000469585 SNAI1O95863 264 aaPredicted RBP6.97□□□□□ -1.29
PTCD3-208ENST00000469585 PGK1P00558 417 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 MYL3P08590 195 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 POU2F2P09086 479 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 SUPT20HL2P0C7V6 817 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 CNR2P34972 360 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 RGS19P49795 217 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 EVCP57679 992 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 TOB2Q14106 344 aaPredicted RBP6.97□□□□□ -1.29
PTCD3-208ENST00000469585 PGM5Q15124 567 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 NOMO1Q15155 1222 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 ZFYVE27Q5T4F4 411 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 ADGRE4PQ86SQ3 457 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 KRTAP1-3Q8IUG1 177 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 TCEAL8Q8IYN2 117 aa6.97□□□□□ -1.29
PTCD3-208ENST00000469585 DOCK3Q8IZD9 2030 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms