RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 PAEPP09466 180 aa19.22■□□□□ 0.67
PHGDH-204ENST00000469443 RALAP11233 206 aa19.22■□□□□ 0.67
PHGDH-204ENST00000469443 EIF2DP41214 584 aaKnown RBP19.22■□□□□ 0.67
PHGDH-204ENST00000469443 PDE4CQ08493 712 aa19.22■□□□□ 0.67
PHGDH-204ENST00000469443 BST2Q10589 180 aaKnown RBP19.22■□□□□ 0.67
PHGDH-204ENST00000469443 C10orf120Q5SQS8 335 aa19.22■□□□□ 0.67
PHGDH-204ENST00000469443 LY6G5CQ5SRR4 150 aa19.22■□□□□ 0.67
PHGDH-204ENST00000469443 HEATR6Q6AI08 1181 aaKnown RBP19.22■□□□□ 0.67
PHGDH-204ENST00000469443 HTR3DQ70Z44 454 aa19.22■□□□□ 0.67
PHGDH-204ENST00000469443 TADA2BQ86TJ2 420 aa19.22■□□□□ 0.67
PHGDH-204ENST00000469443 MLKLQ8NB16 471 aa19.22■□□□□ 0.67
PHGDH-204ENST00000469443 RPLP0P6Q8NHW5 317 aa19.22■□□□□ 0.67
PHGDH-204ENST00000469443 KAT5Q92993 513 aa19.22■□□□□ 0.67
PHGDH-204ENST00000469443 HINFPQ9BQA5 517 aa19.22■□□□□ 0.67
PHGDH-204ENST00000469443 DNMT3LQ9UJW3 386 aa19.22■□□□□ 0.67
PHGDH-204ENST00000469443 NUDT5Q9UKK9 219 aa19.22■□□□□ 0.67
PHGDH-204ENST00000469443 SLC8A2Q9UPR5 921 aa19.22■□□□□ 0.67
PHGDH-204ENST00000469443 TULP2O00295 520 aa19.21■□□□□ 0.67
PHGDH-204ENST00000469443 O00370 1275 aa19.21■□□□□ 0.67
PHGDH-204ENST00000469443 MDM4O15151 490 aa19.21■□□□□ 0.67
PHGDH-204ENST00000469443 GREM1O60565 184 aa19.21■□□□□ 0.67
PHGDH-204ENST00000469443 HOXC13P31276 330 aa19.21■□□□□ 0.67
PHGDH-204ENST00000469443 CNR2P34972 360 aa19.21■□□□□ 0.67
PHGDH-204ENST00000469443 PLA2G4AP47712 749 aa19.21■□□□□ 0.67
PHGDH-204ENST00000469443 SLC6A11P48066 632 aa19.21■□□□□ 0.67
PHGDH-204ENST00000469443 GCNT1Q02742 428 aa19.21■□□□□ 0.67
PHGDH-204ENST00000469443 GAD2Q05329 585 aa19.21■□□□□ 0.67
PHGDH-204ENST00000469443 ARHGEF19Q8IW93 802 aa19.21■□□□□ 0.67
PHGDH-204ENST00000469443 ARHGAP18Q8N392 663 aa19.21■□□□□ 0.67
PHGDH-204ENST00000469443 ACDQ96AP0 544 aa19.21■□□□□ 0.67
PHGDH-204ENST00000469443 CNOT6LQ96LI5 555 aaKnown RBP19.21■□□□□ 0.67
PHGDH-204ENST00000469443 MED15Q96RN5 788 aa19.21■□□□□ 0.67
PHGDH-204ENST00000469443 CDK5RAP1Q96SZ6 601 aaKnown RBP19.21■□□□□ 0.67
PHGDH-204ENST00000469443 PNKPQ96T60 521 aa19.21■□□□□ 0.67
PHGDH-204ENST00000469443 LSM7Q9UK45 103 aaKnown RBP19.21■□□□□ 0.67
PHGDH-204ENST00000469443 K7EQS6 105 aa19.2■□□□□ 0.66
PHGDH-204ENST00000469443 RNF225M0QZC1 329 aaPredicted RBP19.2■□□□□ 0.66
PHGDH-204ENST00000469443 HOXC11O43248 304 aaPredicted RBP19.2■□□□□ 0.66
PHGDH-204ENST00000469443 SETSIPP0DME0 302 aa19.2■□□□□ 0.66
PHGDH-204ENST00000469443 TKTL1P51854 596 aa19.2■□□□□ 0.66
PHGDH-204ENST00000469443 PM20D1Q6GTS8 502 aa19.2■□□□□ 0.66
PHGDH-204ENST00000469443 LCLAT1Q6UWP7 414 aa19.2■□□□□ 0.66
PHGDH-204ENST00000469443 RRAGAQ7L523 313 aa19.2■□□□□ 0.66
PHGDH-204ENST00000469443 SYT13Q7L8C5 426 aa19.2■□□□□ 0.66
PHGDH-204ENST00000469443 WDR5BQ86VZ2 330 aa19.2■□□□□ 0.66
PHGDH-204ENST00000469443 C12orf40Q86WS4 652 aa19.2■□□□□ 0.66
PHGDH-204ENST00000469443 RBBP8NLQ8NC74 664 aaPredicted RBP19.2■□□□□ 0.66
PHGDH-204ENST00000469443 UBA3Q8TBC4 463 aa19.2■□□□□ 0.66
PHGDH-204ENST00000469443 ULBP1Q9BZM6 244 aa19.2■□□□□ 0.66
PHGDH-204ENST00000469443 INTS2Q9H0H0 1204 aaKnown RBP19.2■□□□□ 0.66
PHGDH-204ENST00000469443 LRRC4Q9HBW1 653 aa19.2■□□□□ 0.66
PHGDH-204ENST00000469443 SPHK2Q9NRA0 654 aa19.2■□□□□ 0.66
PHGDH-204ENST00000469443 NCDNQ9UBB6 729 aa19.2■□□□□ 0.66
PHGDH-204ENST00000469443 RAB23Q9ULC3 237 aa19.2■□□□□ 0.66
PHGDH-204ENST00000469443 CCDC163A0A0D9SF12 145 aa19.19■□□□□ 0.66
PHGDH-204ENST00000469443 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.19■□□□□ 0.66
PHGDH-204ENST00000469443 ZBED1O96006 694 aa19.19■□□□□ 0.66
PHGDH-204ENST00000469443 APODP05090 189 aa19.19■□□□□ 0.66
PHGDH-204ENST00000469443 YWHAGP61981 247 aaKnown RBP eCLIP19.19■□□□□ 0.66
PHGDH-204ENST00000469443 STILQ15468 1287 aa19.19■□□□□ 0.66
PHGDH-204ENST00000469443 CNGA2Q16280 664 aa19.19■□□□□ 0.66
PHGDH-204ENST00000469443 PKDCCQ504Y2 493 aa19.19■□□□□ 0.66
PHGDH-204ENST00000469443 BTBD8Q5XKL5 378 aa19.19■□□□□ 0.66
PHGDH-204ENST00000469443 TMEM25Q86YD3 366 aa19.19■□□□□ 0.66
PHGDH-204ENST00000469443 ETFBKMTQ8IXQ9 262 aa19.19■□□□□ 0.66
PHGDH-204ENST00000469443 DCLK2Q8N568 766 aa19.19■□□□□ 0.66
PHGDH-204ENST00000469443 CAMKK1Q8N5S9 505 aa19.19■□□□□ 0.66
PHGDH-204ENST00000469443 USP33Q8TEY7 942 aa19.19■□□□□ 0.66
PHGDH-204ENST00000469443 TFAP2BQ92481 460 aa19.19■□□□□ 0.66
PHGDH-204ENST00000469443 NUP62CLQ9H1M0 184 aa19.19■□□□□ 0.66
PHGDH-204ENST00000469443 ARHGEF4Q9NR80 690 aa19.19■□□□□ 0.66
PHGDH-204ENST00000469443 POLR3BQ9NW08 1133 aaPredicted RBP19.19■□□□□ 0.66
PHGDH-204ENST00000469443 HRO43593 1189 aa19.18■□□□□ 0.66
PHGDH-204ENST00000469443 STC2O76061 302 aa19.18■□□□□ 0.66
PHGDH-204ENST00000469443 KAT7O95251 611 aa19.18■□□□□ 0.66
PHGDH-204ENST00000469443 ZNF132P52740 706 aa19.18■□□□□ 0.66
PHGDH-204ENST00000469443 SEC13P55735 322 aa19.18■□□□□ 0.66
PHGDH-204ENST00000469443 COG7P83436 770 aa19.18■□□□□ 0.66
PHGDH-204ENST00000469443 ADIGQ0VDE8 80 aa19.18■□□□□ 0.66
PHGDH-204ENST00000469443 MESP2Q0VG99 397 aa19.18■□□□□ 0.66
PHGDH-204ENST00000469443 SIM2Q14190 667 aaPredicted RBP19.18■□□□□ 0.66
PHGDH-204ENST00000469443 DMC1Q14565 340 aa19.18■□□□□ 0.66
PHGDH-204ENST00000469443 ANO4Q32M45 955 aa19.18■□□□□ 0.66
PHGDH-204ENST00000469443 MIB1Q86YT6 1006 aa19.18■□□□□ 0.66
PHGDH-204ENST00000469443 IRF2BP1Q8IU81 584 aa19.18■□□□□ 0.66
PHGDH-204ENST00000469443 CREBRFQ8IUR6 639 aa19.18■□□□□ 0.66
PHGDH-204ENST00000469443 KCTD13Q8WZ19 329 aa19.18■□□□□ 0.66
PHGDH-204ENST00000469443 SECISBP2LQ93073 1101 aaKnown RBP19.18■□□□□ 0.66
PHGDH-204ENST00000469443 KREMEN1Q96MU8 473 aa19.18■□□□□ 0.66
PHGDH-204ENST00000469443 ZSWIM1Q9BR11 485 aa19.18■□□□□ 0.66
PHGDH-204ENST00000469443 RASAL2Q9UJF2 1139 aa19.18■□□□□ 0.66
PHGDH-204ENST00000469443 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.18■□□□□ 0.66
PHGDH-204ENST00000469443 SDK1Q7Z5N4 2213 aa19.17■□□□□ 0.66
PHGDH-204ENST00000469443 A0A0A0MRY4 1105 aa19.17■□□□□ 0.66
PHGDH-204ENST00000469443 TULP3O75386 442 aa19.17■□□□□ 0.66
PHGDH-204ENST00000469443 BRD2P25440 801 aaKnown RBP19.17■□□□□ 0.66
PHGDH-204ENST00000469443 GRIA2P42262 883 aa19.17■□□□□ 0.66
PHGDH-204ENST00000469443 PXNP49023 591 aaPredicted RBP19.17■□□□□ 0.66
PHGDH-204ENST00000469443 MRPS21P82921 87 aaKnown RBP19.17■□□□□ 0.66
PHGDH-204ENST00000469443 KDSRQ06136 332 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms