RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 YIPF1Q9Y548 306 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 ASB3Q9Y575 518 aa8.55□□□□□ -1.04
NPHP3-204ENST00000469232 MTCL1Q9Y4B5 1905 aaKnown RBP8.55□□□□□ -1.04
NPHP3-204ENST00000469232 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.54□□□□□ -1.04
NPHP3-204ENST00000469232 EPOPA6NHQ4 379 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 YJEFN3A6XGL0 299 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 E7ENQ6 273 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 MYO1FO00160 1098 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 CES2O00748 559 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 C2CD2LO14523 706 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 BUB1O43683 1085 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 CLASP2O75122 1294 aaKnown RBP8.54□□□□□ -1.04
NPHP3-204ENST00000469232 POU3F3P20264 500 aaPredicted RBP8.54□□□□□ -1.04
NPHP3-204ENST00000469232 NOS2P35228 1153 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 PCK1P35558 622 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 IRS1P35568 1242 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 FLT3P36888 993 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 MATKP42679 507 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 PEX5P50542 639 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 EPHA5P54756 1037 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 GNG11P61952 73 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 USP46P62068 366 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 YWHAZP63104 245 aaKnown RBP8.54□□□□□ -1.04
NPHP3-204ENST00000469232 DDR2Q16832 855 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 ZNF569Q5MCW4 686 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 FAM102AQ5T9C2 384 aaPredicted RBP8.54□□□□□ -1.04
NPHP3-204ENST00000469232 DENND5BQ6ZUT9 1274 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 SIX6OS1Q8N1H7 587 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 SCAMP5Q8TAC9 235 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 CLEC4CQ8WTT0 213 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 C16orf45Q96MC5 204 aaPredicted RBP8.54□□□□□ -1.04
NPHP3-204ENST00000469232 PGLYRP2Q96PD5 576 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 MCEEQ96PE7 176 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 ALS2CR12Q96Q35 445 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 SELENOOQ9BVL4 669 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 LRRC3Q9BY71 257 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 SYNCQ9H7C4 482 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 METTL5Q9NRN9 209 aaKnown RBP8.54□□□□□ -1.04
NPHP3-204ENST00000469232 CLIC5Q9NZA1 410 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 LMCD1Q9NZU5 365 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 INSL5Q9Y5Q6 135 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 ZNF638Q14966 1978 aaKnown RBP8.54□□□□□ -1.04
NPHP3-204ENST00000469232 SLC38A8A6NNN8 435 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 MIF4GDA9UHW6 222 aaKnown RBP8.54□□□□□ -1.04
NPHP3-204ENST00000469232 DDX3YO15523 660 aaKnown RBP8.54□□□□□ -1.04
NPHP3-204ENST00000469232 GJB6O95452 261 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 LTFP02788 710 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 USP17L7P0C7H9 530 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 CSH1P0DML2 217 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 CSH2P0DML3 217 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 LCP1P13796 627 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 TNNT1P13805 278 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 GPD1P21695 349 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 CTNNA1P35221 906 aaKnown RBP8.54□□□□□ -1.04
NPHP3-204ENST00000469232 NOP2P46087 812 aaKnown RBP8.54□□□□□ -1.04
NPHP3-204ENST00000469232 GPR15P49685 360 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 PLD1Q13393 1074 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 TUBB2AQ13885 445 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 COL19A1Q14993 1142 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 DUSP6Q16828 381 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 SLC25A52Q3SY17 297 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 CCDC14Q49A88 953 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 PPP2R2DQ66LE6 453 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 DCUN1D2Q6PH85 259 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 KLHDC10Q6PID8 442 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 TMEM184AQ6ZMB5 413 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 CCDC149Q6ZUS6 474 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 HFE2Q6ZVN8 426 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 CYP4V2Q6ZWL3 525 aaPredicted RBP8.54□□□□□ -1.04
NPHP3-204ENST00000469232 STRADAQ7RTN6 431 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 POLNQ7Z5Q5 900 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 ARHGAP18Q8N392 663 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 FAM71BQ8TC56 605 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 RXFP2Q8WXD0 754 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 PSMG2Q969U7 264 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 MRPL38Q96DV4 380 aaKnown RBP8.54□□□□□ -1.04
NPHP3-204ENST00000469232 CDCA3Q99618 268 aaPredicted RBP8.54□□□□□ -1.04
NPHP3-204ENST00000469232 TUBB2BQ9BVA1 445 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 PRR14Q9BWN1 585 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 POPDC2Q9HBU9 364 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 ENTPD7Q9NQZ7 604 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 EHD2Q9NZN4 543 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 TTC7AQ9ULT0 858 aaPredicted RBP8.54□□□□□ -1.04
NPHP3-204ENST00000469232 SLC27A5Q9Y2P5 690 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 PCDHA3Q9Y5H8 950 aa8.54□□□□□ -1.04
NPHP3-204ENST00000469232 SOBPA7XYQ1 873 aa8.53□□□□□ -1.04
NPHP3-204ENST00000469232 GOLGA8SH3BPF8 625 aa8.53□□□□□ -1.04
NPHP3-204ENST00000469232 LRCH4O75427 683 aa8.53□□□□□ -1.04
NPHP3-204ENST00000469232 GLUD1P00367 558 aa8.53□□□□□ -1.04
NPHP3-204ENST00000469232 HNRNPA1P09651 372 aaKnown RBP eCLIP8.53□□□□□ -1.04
NPHP3-204ENST00000469232 PDGFRAP16234 1089 aa8.53□□□□□ -1.04
NPHP3-204ENST00000469232 COMTP21964 271 aa8.53□□□□□ -1.04
NPHP3-204ENST00000469232 YWHAQP27348 245 aa8.53□□□□□ -1.04
NPHP3-204ENST00000469232 PPP3CCP48454 512 aa8.53□□□□□ -1.04
NPHP3-204ENST00000469232 PGFP49763 221 aa8.53□□□□□ -1.04
NPHP3-204ENST00000469232 TUBP50607 506 aa8.53□□□□□ -1.04
NPHP3-204ENST00000469232 ARPP19P56211 112 aa8.53□□□□□ -1.04
NPHP3-204ENST00000469232 COPS2P61201 443 aa8.53□□□□□ -1.04
NPHP3-204ENST00000469232 SLC25A11Q02978 314 aaKnown RBP8.53□□□□□ -1.04
NPHP3-204ENST00000469232 NNTQ13423 1086 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms