RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 TRMT10CQ7L0Y3 403 aaKnown RBP9.74□□□□□ -0.85
SMC1A-205ENST00000469129 ANKRD33Q7Z3H0 272 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 PCGF5Q86SE9 256 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 RTN4RL1Q86UN2 441 aaPredicted RBP9.74□□□□□ -0.85
SMC1A-205ENST00000469129 HOOK3Q86VS8 718 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 NPAS4Q8IUM7 802 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 SPATA2LQ8IUW3 424 aaPredicted RBP9.74□□□□□ -0.85
SMC1A-205ENST00000469129 DEFB106AQ8N104 65 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 LRRC43Q8N309 656 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 ACTL9Q8TC94 416 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 HASPINQ8TF76 798 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 CLEC4CQ8WTT0 213 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 P3H4Q92791 437 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 KHSRPQ92945 711 aaKnown RBP eCLIP9.74□□□□□ -0.85
SMC1A-205ENST00000469129 HAUS1Q96CS2 278 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 TOX2Q96NM4 488 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 ZIM3Q96PE6 472 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 PKMYT1Q99640 499 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 SMOQ99835 787 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 TMEM175Q9BSA9 504 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 COLEC11Q9BWP8 271 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 OXCT2Q9BYC2 517 aaPredicted RBP9.74□□□□□ -0.85
SMC1A-205ENST00000469129 ULBP1Q9BZM6 244 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 DNPEPQ9ULA0 475 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 AP4E1Q9UPM8 1137 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 PLAAQ9Y263 795 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 H3BRJ5 948 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 I3L4J1 428 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 ENPP3O14638 875 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 DNALI1O14645 258 aaPredicted RBP9.73□□□□□ -0.85
SMC1A-205ENST00000469129 ZBED1O96006 694 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 F9P00740 461 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 CXCL10P02778 98 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 LTFP02788 710 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 NUDT17P0C025 328 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 CAPN2P17655 700 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 EN2P19622 333 aaPredicted RBP9.73□□□□□ -0.85
SMC1A-205ENST00000469129 KLRC2P26717 231 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 RFC2P35250 354 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 ACTN2P35609 894 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 EIF3EP60228 445 aaKnown RBP9.73□□□□□ -0.85
SMC1A-205ENST00000469129 DYNLT1P63172 113 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 ROR1Q01973 937 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 IFFO1Q0D2I5 559 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 NOMO1Q15155 1222 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 TAF5Q15542 800 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 EFHC2Q5JST6 749 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 KIAA0319Q5VV43 1072 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 IZUMO3Q5VZ72 239 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 DENND2CQ68D51 928 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 SLC9A4Q6AI14 798 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 CD300LGQ6UXG3 332 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 C4orf22Q6V702 233 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 BEND5Q7L4P6 421 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 ANKS1BQ7Z6G8 1248 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 CDKL3Q8IVW4 592 aaPredicted RBP9.73□□□□□ -0.85
SMC1A-205ENST00000469129 IQCKQ8N0W5 287 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 ANKLE1Q8NAG6 615 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 DBF4BQ8NFT6 615 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 RSAD2Q8WXG1 361 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 NT5C3BQ969T7 300 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 NTAN1Q96AB6 310 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 FAF2Q96CS3 445 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 FUBP3Q96I24 572 aaKnown RBP eCLIP9.73□□□□□ -0.85
SMC1A-205ENST00000469129 RNF157Q96PX1 679 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 SLC9A7Q96T83 725 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 NPY6RQ99463 290 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 RTP3Q9BQQ7 232 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 TXLNGYQ9BZA5 131 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 PHACTR1Q9C0D0 580 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 PABPC3Q9H361 631 aaKnown RBP9.73□□□□□ -0.85
SMC1A-205ENST00000469129 HIPK3Q9H422 1215 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 PCDH18Q9HCL0 1135 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 VPS18Q9P253 973 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 ANAPC5Q9UJX4 755 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 ADAM28Q9UKQ2 775 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 SHOC2Q9UQ13 582 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 ATP8A1Q9Y2Q0 1164 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 NEU2Q9Y3R4 380 aa9.73□□□□□ -0.85
SMC1A-205ENST00000469129 SF3B1O75533 1304 aaKnown RBP eCLIP9.73□□□□□ -0.85
SMC1A-205ENST00000469129 CARNS1A5YM72 827 aa9.72□□□□□ -0.85
SMC1A-205ENST00000469129 GOLGA6CA6NDK9 693 aa9.72□□□□□ -0.85
SMC1A-205ENST00000469129 OR6C75A6NL08 312 aa9.72□□□□□ -0.85
SMC1A-205ENST00000469129 HMGB1P1B2RPK0 211 aaPredicted RBP9.72□□□□□ -0.85
SMC1A-205ENST00000469129 HHLA1C9JL84 531 aa9.72□□□□□ -0.85
SMC1A-205ENST00000469129 AGPSO00116 658 aa9.72□□□□□ -0.85
SMC1A-205ENST00000469129 TRIM66O15016 1216 aa9.72□□□□□ -0.85
SMC1A-205ENST00000469129 POLR3GO15318 223 aaPredicted RBP9.72□□□□□ -0.85
SMC1A-205ENST00000469129 TADA2AO75478 443 aa9.72□□□□□ -0.85
SMC1A-205ENST00000469129 BEST1O76090 585 aa9.72□□□□□ -0.85
SMC1A-205ENST00000469129 DDHD2O94830 711 aa9.72□□□□□ -0.85
SMC1A-205ENST00000469129 OAZ2O95190 189 aa9.72□□□□□ -0.85
SMC1A-205ENST00000469129 SYF2O95926 243 aaKnown RBP9.72□□□□□ -0.85
SMC1A-205ENST00000469129 CD48P09326 243 aa9.72□□□□□ -0.85
SMC1A-205ENST00000469129 MYZAPP0CAP1 466 aa9.72□□□□□ -0.85
SMC1A-205ENST00000469129 GOLGA6DP0CG33 693 aa9.72□□□□□ -0.85
SMC1A-205ENST00000469129 RARGP13631 454 aa9.72□□□□□ -0.85
SMC1A-205ENST00000469129 BDNFP23560 247 aa9.72□□□□□ -0.85
SMC1A-205ENST00000469129 STIP1P31948 543 aaKnown RBP9.72□□□□□ -0.85
SMC1A-205ENST00000469129 ITGA8P53708 1063 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms