RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 GJA10Q969M2 543 aa6.37□□□□□ -1.39
XRN1-207ENST00000468894 CERS4Q9HA82 394 aa6.37□□□□□ -1.39
XRN1-207ENST00000468894 ASAP1Q9ULH1 1129 aa6.37□□□□□ -1.39
XRN1-207ENST00000468894 PCDHGB2Q9Y5G2 931 aa6.37□□□□□ -1.39
XRN1-207ENST00000468894 CCDC194A0A1B0GVG4 234 aa6.36□□□□□ -1.39
XRN1-207ENST00000468894 FAM234BA2RU67 622 aa6.36□□□□□ -1.39
XRN1-207ENST00000468894 TMPRSS11DO60235 418 aa6.36□□□□□ -1.39
XRN1-207ENST00000468894 CD19P15391 556 aa6.36□□□□□ -1.39
XRN1-207ENST00000468894 EEF1GP26641 437 aaKnown RBP6.36□□□□□ -1.39
XRN1-207ENST00000468894 SLC5A2P31639 672 aa6.36□□□□□ -1.39
XRN1-207ENST00000468894 EIF4A1P60842 406 aaKnown RBP6.36□□□□□ -1.39
XRN1-207ENST00000468894 ST3GAL2Q16842 350 aa6.36□□□□□ -1.39
XRN1-207ENST00000468894 SYCP2LQ5T4T6 812 aa6.36□□□□□ -1.39
XRN1-207ENST00000468894 PRAMEF17Q5VTA0 474 aa6.36□□□□□ -1.39
XRN1-207ENST00000468894 XRRA1Q6P2D8 792 aa6.36□□□□□ -1.39
XRN1-207ENST00000468894 FSTL5Q8N475 847 aaPredicted RBP6.36□□□□□ -1.39
XRN1-207ENST00000468894 LINC01465Q8N7H1 131 aa6.36□□□□□ -1.39
XRN1-207ENST00000468894 GLIS1Q8NBF1 620 aa6.36□□□□□ -1.39
XRN1-207ENST00000468894 DEPTORQ8TB45 409 aa6.36□□□□□ -1.39
XRN1-207ENST00000468894 RITA1Q96K30 269 aa6.36□□□□□ -1.39
XRN1-207ENST00000468894 TNIP3Q96KP6 325 aa6.36□□□□□ -1.39
XRN1-207ENST00000468894 SNX27Q96L92 541 aa6.36□□□□□ -1.39
XRN1-207ENST00000468894 WDR24Q96S15 920 aa6.36□□□□□ -1.39
XRN1-207ENST00000468894 ELAC2Q9BQ52 826 aaKnown RBP6.36□□□□□ -1.39
XRN1-207ENST00000468894 SNX15Q9NRS6 342 aa6.36□□□□□ -1.39
XRN1-207ENST00000468894 NKX1-2Q9UD57 310 aaPredicted RBP6.36□□□□□ -1.39
XRN1-207ENST00000468894 CBFA2T3O75081 653 aa6.35□□□□□ -1.39
XRN1-207ENST00000468894 WDR47O94967 919 aa6.35□□□□□ -1.39
XRN1-207ENST00000468894 PRKCGP05129 697 aa6.35□□□□□ -1.39
XRN1-207ENST00000468894 APEHP13798 732 aaKnown RBP6.35□□□□□ -1.39
XRN1-207ENST00000468894 ZNF37AP17032 561 aaPredicted RBP6.35□□□□□ -1.39
XRN1-207ENST00000468894 EGR1P18146 543 aa6.35□□□□□ -1.39
XRN1-207ENST00000468894 YY1P25490 414 aa6.35□□□□□ -1.39
XRN1-207ENST00000468894 HSPA7P48741 367 aa6.35□□□□□ -1.39
XRN1-207ENST00000468894 MTAPQ13126 283 aa6.35□□□□□ -1.39
XRN1-207ENST00000468894 MPEG1Q2M385 716 aa6.35□□□□□ -1.39
XRN1-207ENST00000468894 SLC5A9Q2M3M2 681 aa6.35□□□□□ -1.39
XRN1-207ENST00000468894 COLEC12Q5KU26 742 aa6.35□□□□□ -1.39
XRN1-207ENST00000468894 GRHL2Q6ISB3 625 aa6.35□□□□□ -1.39
XRN1-207ENST00000468894 FAM186BQ8IYM0 893 aa6.35□□□□□ -1.39
XRN1-207ENST00000468894 CCDC150Q8NCX0 1101 aa6.35□□□□□ -1.39
XRN1-207ENST00000468894 SEMA6DQ8NFY4 1073 aa6.35□□□□□ -1.39
XRN1-207ENST00000468894 SUN3Q8TAQ9 357 aa6.35□□□□□ -1.39
XRN1-207ENST00000468894 EIF2AQ9BY44 585 aaKnown RBP6.35□□□□□ -1.39
XRN1-207ENST00000468894 PCDHAC1Q9H158 963 aa6.35□□□□□ -1.39
XRN1-207ENST00000468894 RGL1Q9NZL6 768 aa6.35□□□□□ -1.39
XRN1-207ENST00000468894 ZMYND8Q9ULU4 1186 aaPredicted RBP6.35□□□□□ -1.39
XRN1-207ENST00000468894 FRMD4BQ9Y2L6 1034 aa6.35□□□□□ -1.39
XRN1-207ENST00000468894 TCRBV5S1A1TA0A578 114 aa6.34□□□□□ -1.39
XRN1-207ENST00000468894 CGB1A6NKQ9 187 aa6.34□□□□□ -1.39
XRN1-207ENST00000468894 COQ9O75208 318 aa6.34□□□□□ -1.39
XRN1-207ENST00000468894 IFIT2P09913 472 aaKnown RBP6.34□□□□□ -1.39
XRN1-207ENST00000468894 PECAM1P16284 738 aaPredicted RBP6.34□□□□□ -1.39
XRN1-207ENST00000468894 ABCB4P21439 1286 aa6.34□□□□□ -1.39
XRN1-207ENST00000468894 ADRA1DP25100 572 aa6.34□□□□□ -1.39
XRN1-207ENST00000468894 SERPINB3P29508 390 aa6.34□□□□□ -1.39
XRN1-207ENST00000468894 SLC10A2Q12908 348 aaPredicted RBP6.34□□□□□ -1.39
XRN1-207ENST00000468894 ACOX1Q15067 660 aa6.34□□□□□ -1.39
XRN1-207ENST00000468894 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.34□□□□□ -1.39
XRN1-207ENST00000468894 ZNF66Q6ZN08 573 aa6.34□□□□□ -1.39
XRN1-207ENST00000468894 CHSY1Q86X52 802 aa6.34□□□□□ -1.39
XRN1-207ENST00000468894 ZNF566Q969W8 418 aa6.34□□□□□ -1.39
XRN1-207ENST00000468894 ZNF700Q9H0M5 742 aa6.34□□□□□ -1.39
XRN1-207ENST00000468894 TMEM8AQ9HCN3 771 aa6.34□□□□□ -1.39
XRN1-207ENST00000468894 MGAT4CQ9UBM8 478 aa6.34□□□□□ -1.39
XRN1-207ENST00000468894 OR2W5A6NFC9 320 aa6.33□□□□□ -1.4
XRN1-207ENST00000468894 LATS1O95835 1130 aa6.33□□□□□ -1.4
XRN1-207ENST00000468894 TMEM225BP0DP42 221 aa6.33□□□□□ -1.4
XRN1-207ENST00000468894 IDEP14735 1019 aa6.33□□□□□ -1.4
XRN1-207ENST00000468894 COPB1P53618 953 aaKnown RBP6.33□□□□□ -1.4
XRN1-207ENST00000468894 CCDC142Q17RM4 750 aa6.33□□□□□ -1.4
XRN1-207ENST00000468894 ARHGAP15Q53QZ3 475 aa6.33□□□□□ -1.4
XRN1-207ENST00000468894 DGKKQ5KSL6 1271 aa6.33□□□□□ -1.4
XRN1-207ENST00000468894 DENND2CQ68D51 928 aa6.33□□□□□ -1.4
XRN1-207ENST00000468894 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.33□□□□□ -1.4
XRN1-207ENST00000468894 PNLDC1Q8NA58 520 aaKnown RBP6.33□□□□□ -1.4
XRN1-207ENST00000468894 MAFAQ8NHW3 353 aaPredicted RBP6.33□□□□□ -1.4
XRN1-207ENST00000468894 C18orf8Q96DM3 657 aa6.33□□□□□ -1.4
XRN1-207ENST00000468894 EDC3Q96F86 508 aaKnown RBP6.33□□□□□ -1.4
XRN1-207ENST00000468894 SLC39A13Q96H72 371 aa6.33□□□□□ -1.4
XRN1-207ENST00000468894 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.33□□□□□ -1.4
XRN1-207ENST00000468894 NLRC4Q9NPP4 1024 aa6.33□□□□□ -1.4
XRN1-207ENST00000468894 TMOD4Q9NZQ9 345 aa6.33□□□□□ -1.4
XRN1-207ENST00000468894 PODXLO00592 558 aa6.32□□□□□ -1.4
XRN1-207ENST00000468894 CA12O43570 354 aa6.32□□□□□ -1.4
XRN1-207ENST00000468894 CCNT2O60583 730 aaKnown RBP6.32□□□□□ -1.4
XRN1-207ENST00000468894 MT-CO3P00414 261 aa6.32□□□□□ -1.4
XRN1-207ENST00000468894 PBX1P40424 430 aa6.32□□□□□ -1.4
XRN1-207ENST00000468894 TUBA4AP68366 448 aa6.32□□□□□ -1.4
XRN1-207ENST00000468894 MRPS21P82921 87 aaKnown RBP6.32□□□□□ -1.4
XRN1-207ENST00000468894 FAM187BQ17R55 369 aa6.32□□□□□ -1.4
XRN1-207ENST00000468894 AASDHQ4L235 1098 aaPredicted RBP6.32□□□□□ -1.4
XRN1-207ENST00000468894 TMTC4Q5T4D3 741 aa6.32□□□□□ -1.4
XRN1-207ENST00000468894 FBXO38Q6PIJ6 1188 aa6.32□□□□□ -1.4
XRN1-207ENST00000468894 SERPINA13PQ6UXR4 307 aa6.32□□□□□ -1.4
XRN1-207ENST00000468894 KRT73Q86Y46 540 aa6.32□□□□□ -1.4
XRN1-207ENST00000468894 PNPLA1Q8N8W4 532 aa6.32□□□□□ -1.4
XRN1-207ENST00000468894 ABHD5Q8WTS1 349 aa6.32□□□□□ -1.4
XRN1-207ENST00000468894 TFCP2L1Q9NZI6 479 aa6.32□□□□□ -1.4
XRN1-207ENST00000468894 PRRT4C9JH25 899 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms