RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 TRIM31Q9BZY9 425 aa10.62□□□□□ -0.71
MSH5-213ENST00000468136 CRISPLD2Q9H0B8 497 aa10.62□□□□□ -0.71
MSH5-213ENST00000468136 BRD8Q9H0E9 1235 aa10.62□□□□□ -0.71
MSH5-213ENST00000468136 RNF208Q9H0X6 261 aa10.62□□□□□ -0.71
MSH5-213ENST00000468136 PCDH18Q9HCL0 1135 aa10.62□□□□□ -0.71
MSH5-213ENST00000468136 TBC1D13Q9NVG8 400 aa10.62□□□□□ -0.71
MSH5-213ENST00000468136 STK39Q9UEW8 545 aa10.62□□□□□ -0.71
MSH5-213ENST00000468136 FAM153AQ9UHL3 310 aa10.62□□□□□ -0.71
MSH5-213ENST00000468136 DNPEPQ9ULA0 475 aa10.62□□□□□ -0.71
MSH5-213ENST00000468136 TPX2Q9ULW0 747 aaKnown RBP10.62□□□□□ -0.71
MSH5-213ENST00000468136 R3HDM2Q9Y2K5 976 aaKnown RBP10.62□□□□□ -0.71
MSH5-213ENST00000468136 FRMPD3Q5JV73 1810 aa10.62□□□□□ -0.71
MSH5-213ENST00000468136 BCLAF3A2AJT9 711 aaKnown RBP10.61□□□□□ -0.71
MSH5-213ENST00000468136 GOLGA6CA6NDK9 693 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 H3BRJ5 948 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 AGPSO00116 658 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 TRIM66O15016 1216 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 RNF40O75150 1001 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 ATP2C2O75185 946 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 GABBR2O75899 941 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 SYF2O95926 243 aaKnown RBP10.61□□□□□ -0.71
MSH5-213ENST00000468136 LTFP02788 710 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 GOLGA6DP0CG33 693 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 TCF4P15884 667 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 TSHRP16473 764 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 ACAT1P24752 427 aaKnown RBP10.61□□□□□ -0.71
MSH5-213ENST00000468136 IVDP26440 423 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 SULT1E1P49888 294 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 BCAR1P56945 870 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 MAP3K7CLP57077 242 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 EIF3EP60228 445 aaKnown RBP10.61□□□□□ -0.71
MSH5-213ENST00000468136 ATP11AP98196 1134 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 OTUD4Q01804 1114 aaKnown RBP10.61□□□□□ -0.71
MSH5-213ENST00000468136 ROR1Q01973 937 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 ADCY2Q08462 1091 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 IFFO1Q0D2I5 559 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 C15orf59Q2T9L4 293 aaPredicted RBP10.61□□□□□ -0.71
MSH5-213ENST00000468136 SMTNL2Q2TAL5 461 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 GLIPR1L2Q4G1C9 344 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 ANKRD20A8PQ5CZ79 823 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 EFHC2Q5JST6 749 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 KCNT1Q5JUK3 1230 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 CLLU1OSQ5K130 101 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 EMC10Q5UCC4 262 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 DAB2IPQ5VWQ8 1189 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 TXNRD3NBQ6F5E7 133 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 ZNF280DQ6N043 979 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 TRNP1Q6NT89 227 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 HIBCHQ6NVY1 386 aaPredicted RBP10.61□□□□□ -0.71
MSH5-213ENST00000468136 CYP4V2Q6ZWL3 525 aaPredicted RBP10.61□□□□□ -0.71
MSH5-213ENST00000468136 CDKL3Q8IVW4 592 aaPredicted RBP10.61□□□□□ -0.71
MSH5-213ENST00000468136 DEFB106AQ8N104 65 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 ZCCHC9Q8N567 271 aaKnown RBP10.61□□□□□ -0.71
MSH5-213ENST00000468136 TSEN2Q8NCE0 465 aaKnown RBP10.61□□□□□ -0.71
MSH5-213ENST00000468136 DBF4BQ8NFT6 615 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 FAM76AQ8TAV0 307 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 SH3TC2Q8TF17 1288 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 UBLCP1Q8WVY7 318 aaPredicted RBP10.61□□□□□ -0.71
MSH5-213ENST00000468136 LINC01599Q8WXQ3 324 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 ATG4AQ8WYN0 398 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 RTP4Q96DX8 246 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 C8orf48Q96LL4 319 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 DEFB118Q96PH6 123 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 CCDC77Q9BR77 488 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 HERPUD2Q9BSE4 406 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 SNRNP25Q9BV90 132 aaKnown RBP10.61□□□□□ -0.71
MSH5-213ENST00000468136 ULBP1Q9BZM6 244 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 FBXO44Q9H4M3 255 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 RNF19AQ9NV58 838 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 GOLGA6AQ9NYA3 693 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 DONSONQ9NYP3 566 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 PLAAQ9Y263 795 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 USP3Q9Y6I4 520 aa10.61□□□□□ -0.71
MSH5-213ENST00000468136 TDRD15B5MCY1 1934 aaKnown RBP10.6□□□□□ -0.71
MSH5-213ENST00000468136 HHLA1C9JL84 531 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 H3BQF6 201 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 SGK1O00141 431 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 CLDN5O00501 218 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 NCAM2O15394 837 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 NBNO60934 754 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 GRAP2O75791 330 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 IVLP07476 585 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 ABHD2P08910 425 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 RBP3P10745 1247 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 ATP5DP30049 168 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 L1CAMP32004 1257 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 BRCC3P46736 316 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 OR1G1P47890 313 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 AFF1P51825 1210 aaKnown RBP10.6□□□□□ -0.71
MSH5-213ENST00000468136 DEUP1Q05D60 604 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 MRPL58Q14197 206 aaKnown RBP10.6□□□□□ -0.71
MSH5-213ENST00000468136 TRADDQ15628 312 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 CDO1Q16878 200 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 P3H1Q32P28 736 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 DCAF6Q58WW2 860 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 C6orf118Q5T5N4 469 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 KIAA0319Q5VV43 1072 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 IZUMO3Q5VZ72 239 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 SLC39A5Q6ZMH5 540 aa10.6□□□□□ -0.71
MSH5-213ENST00000468136 LRRC43Q8N309 656 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms