RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 SLC22A17Q8WUG5 538 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 THAP4Q8WY91 577 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 HTRA1Q92743 480 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 STAMQ92783 540 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 HVCN1Q96D96 273 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 BOD1Q96IK1 185 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 EIF3CQ99613 913 aaKnown RBP4.69□□□□□ -1.66
VPS13A-209ENST00000467124 DPCDQ9BVM2 203 aaPredicted RBP4.69□□□□□ -1.66
VPS13A-209ENST00000467124 DEF6Q9H4E7 631 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 ZNF703Q9H7S9 590 aaPredicted RBP4.69□□□□□ -1.66
VPS13A-209ENST00000467124 UNKLQ9H9P5 680 aaKnown RBP4.69□□□□□ -1.66
VPS13A-209ENST00000467124 UBN1Q9NPG3 1134 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 DKK3Q9UBP4 350 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 PGAP2Q9UHJ9 254 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 GJD2Q9UKL4 321 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 RAB21Q9UL25 225 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 CA14Q9ULX7 337 aa4.69□□□□□ -1.66
VPS13A-209ENST00000467124 RRP7AQ9Y3A4 280 aaKnown RBP4.69□□□□□ -1.66
VPS13A-209ENST00000467124 DYTNA2CJ06 578 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 OR2W5A6NFC9 320 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 DHHO43323 396 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 CA12O43570 354 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 WDR47O94967 919 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 PEX11BO96011 259 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 TK1P04183 234 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 FESP07332 822 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 CHRM2P08172 466 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 IFIT1P09914 478 aaKnown RBP4.68□□□□□ -1.66
VPS13A-209ENST00000467124 CPA1P15085 419 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 XBP1P17861 261 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 NR4A1P22736 598 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 EPHA3P29320 983 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 SERPINA4P29622 427 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 LIPAP38571 399 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 GSTM5P46439 218 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 CCR5P51681 352 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 VAV2P52735 878 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 POLE2P56282 527 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 TRPC3Q13507 836 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 TDGQ13569 410 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 TP53BP2Q13625 1128 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 CSHL1Q14406 222 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 SF3B3Q15393 1217 aaKnown RBP4.68□□□□□ -1.66
VPS13A-209ENST00000467124 INTS11Q5TA45 600 aaKnown RBP4.68□□□□□ -1.66
VPS13A-209ENST00000467124 PIK3AP1Q6ZUJ8 805 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 CAND1Q86VP6 1230 aaKnown RBP4.68□□□□□ -1.66
VPS13A-209ENST00000467124 P3H2Q8IVL5 708 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 PALM2Q8IXS6 379 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 COLGALT2Q8IYK4 626 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 CHST13Q8NET6 341 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 SUN3Q8TAQ9 357 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 WDR60Q8WVS4 1066 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 XAGE5Q8WWM1 108 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 HERVK_113Q902F9 699 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 FUBP1Q96AE4 644 aaKnown RBP4.68□□□□□ -1.66
VPS13A-209ENST00000467124 LOXL4Q96JB6 756 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 ZNF668Q96K58 619 aaPredicted RBP4.68□□□□□ -1.66
VPS13A-209ENST00000467124 OSBPL9Q96SU4 736 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 ADAM2Q99965 735 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 CCDC134Q9H6E4 229 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 GLOD4Q9HC38 313 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 GALNT9Q9HCQ5 603 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 TMEM74BQ9NUR3 256 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 PARPBPQ9NWS1 579 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 ARHGAP26Q9UNA1 814 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 C19orf53Q9UNZ5 99 aaPredicted RBP4.68□□□□□ -1.66
VPS13A-209ENST00000467124 PCDHB2Q9Y5E7 798 aa4.68□□□□□ -1.66
VPS13A-209ENST00000467124 A1L4Q6 167 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 AGAP5A6NIR3 686 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 ZAR1LA6NP61 321 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 M0QZQ0 153 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 TBX18O95935 607 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 HNRNPA1P09651 372 aaKnown RBP eCLIP4.67□□□□□ -1.66
VPS13A-209ENST00000467124 FAM163BP0C2L3 166 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 DDX6P26196 483 aaKnown RBP eCLIP4.67□□□□□ -1.66
VPS13A-209ENST00000467124 THBS4P35443 961 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 KRT9P35527 623 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 BMPR1AP36894 532 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 NR1H2P55055 460 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 FAM3BP58499 235 aaPredicted RBP4.67□□□□□ -1.66
VPS13A-209ENST00000467124 TIRAPP58753 221 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 IRX6P78412 446 aaPredicted RBP4.67□□□□□ -1.66
VPS13A-209ENST00000467124 TIAL1Q01085 375 aaKnown RBP eCLIP4.67□□□□□ -1.66
VPS13A-209ENST00000467124 UBE3AQ05086 875 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 MTAPQ13126 283 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 MAPK7Q13164 816 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 R3HDM1Q15032 1099 aaKnown RBP4.67□□□□□ -1.66
VPS13A-209ENST00000467124 TBCCQ15814 346 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 TREML2Q5T2D2 321 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 TTC22Q5TAA0 569 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 SP5Q6BEB4 398 aaPredicted RBP4.67□□□□□ -1.66
VPS13A-209ENST00000467124 GRHL2Q6ISB3 625 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 KRT27Q7Z3Y8 459 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 TBC1D1Q86TI0 1168 aaPredicted RBP4.67□□□□□ -1.66
VPS13A-209ENST00000467124 FAM109AQ8N4B1 249 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 TMEM57Q8N5G2 664 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 MYCBPAPQ8TBZ2 947 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 SSH3Q8TE77 659 aa4.67□□□□□ -1.66
VPS13A-209ENST00000467124 PTCD3Q96EY7 689 aaKnown RBP4.67□□□□□ -1.66
VPS13A-209ENST00000467124 PRR11Q96HE9 360 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms