RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 B2MP61769 119 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 CUL2Q13617 745 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 GTF2H3Q13889 308 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 FRG1Q14331 258 aaKnown RBP6.06□□□□□ -1.44
LRCH3-212ENST00000466845 NAA25Q14CX7 972 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 ABCB5Q2M3G0 1257 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 TMEM200BQ69YZ2 307 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 NAA16Q6N069 864 aaPredicted RBP6.06□□□□□ -1.44
LRCH3-212ENST00000466845 SHQ1Q6PI26 577 aaKnown RBP6.06□□□□□ -1.44
LRCH3-212ENST00000466845 ZNF600Q6ZNG1 722 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 CHST15Q7LFX5 561 aaPredicted RBP6.06□□□□□ -1.44
LRCH3-212ENST00000466845 BNIPLQ7Z465 357 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 NME9Q86XW9 330 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 GRAMD2AQ8IUY3 354 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 ANKRD35Q8N283 1001 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 IGSF22Q8N9C0 903 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 SMYD1Q8NB12 490 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 HIPK4Q8NE63 616 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 ANKRD20A12PQ8NF67 263 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 MOSPD2Q8NHP6 518 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 DEPTORQ8TB45 409 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 ASB15Q8WXK1 588 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 LPPQ93052 612 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 SDCCAG3Q96C92 435 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 FAM167AQ96KS9 214 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 TCEANC2Q96MN5 208 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 CATSPER2Q96P56 530 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 FAM193BQ96PV7 902 aaPredicted RBP6.06□□□□□ -1.44
LRCH3-212ENST00000466845 PSKH2Q96QS6 385 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 STK31Q9BXU1 1019 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 VPS11Q9H270 941 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 MMADHCQ9H3L0 296 aaPredicted RBP6.06□□□□□ -1.44
LRCH3-212ENST00000466845 C8orf33Q9H7E9 229 aaPredicted RBP6.06□□□□□ -1.44
LRCH3-212ENST00000466845 ITM2CQ9NQX7 267 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 ACSS2Q9NR19 701 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 GLRX2Q9NS18 164 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 MALT1Q9UDY8 824 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 DNM3Q9UQ16 869 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 ANKRD6Q9Y2G4 727 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 VWA7Q9Y334 891 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 CHTOPQ9Y3Y2 248 aaKnown RBP6.06□□□□□ -1.44
LRCH3-212ENST00000466845 PTPRTO14522 1441 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 PTPRKQ15262 1439 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 RNF17Q9BXT8 1623 aaKnown RBP6.06□□□□□ -1.44
LRCH3-212ENST00000466845 TNRQ92752 1358 aa6.06□□□□□ -1.44
LRCH3-212ENST00000466845 DUOX2Q9NRD8 1548 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 MYO3BQ8WXR4 1341 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 A2ML1A8K2U0 1454 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 PZPP20742 1482 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 SHANK2Q9UPX8 1470 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 A0A0B4J269 797 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 LRRC14BA6NHZ5 514 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 TTC34A8MYJ7 566 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 MAPK13O15264 365 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 DOK2O60496 412 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 MPIG6BO95866 241 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 ATP5BP06576 529 aaKnown RBP6.05□□□□□ -1.44
LRCH3-212ENST00000466845 TROVE2P10155 538 aaKnown RBP eCLIP6.05□□□□□ -1.44
LRCH3-212ENST00000466845 PDHBP11177 359 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 ATP5JP18859 108 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 CR2P20023 1033 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 APEX1P27695 318 aaKnown RBP6.05□□□□□ -1.44
LRCH3-212ENST00000466845 HOXA11P31270 313 aaPredicted RBP6.05□□□□□ -1.44
LRCH3-212ENST00000466845 PRKAR2BP31323 418 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 CSTF2P33240 577 aaKnown RBP eCLIP6.05□□□□□ -1.443e-7■■■■□ 20.5
LRCH3-212ENST00000466845 ACTN2P35609 894 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 SLC16A2P36021 539 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 RPS19P39019 145 aaKnown RBP6.05□□□□□ -1.44
LRCH3-212ENST00000466845 MEOX1P50221 254 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 YBEYP58557 167 aaPredicted RBP6.05□□□□□ -1.44
LRCH3-212ENST00000466845 DR1Q01658 176 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 PPARDQ03181 441 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 MXD4Q14582 209 aaPredicted RBP6.05□□□□□ -1.44
LRCH3-212ENST00000466845 CCDC14Q49A88 953 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 PRR16Q569H4 304 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 KANK2Q63ZY3 851 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 GRAMD4Q6IC98 578 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 CNNM4Q6P4Q7 775 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 PPP1R21Q6ZMI0 780 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 USP30Q70CQ3 517 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 UBE2R2Q712K3 238 aaPredicted RBP6.05□□□□□ -1.44
LRCH3-212ENST00000466845 OTOP2Q7RTS6 562 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 HEATR4Q86WZ0 1026 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 CPA6Q8N4T0 437 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 TMCO5AQ8N6Q1 288 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 Q8TCH9 128 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 ZNF483Q8TF39 744 aaPredicted RBP6.05□□□□□ -1.44
LRCH3-212ENST00000466845 DIS3LQ8TF46 1054 aaKnown RBP6.05□□□□□ -1.44
LRCH3-212ENST00000466845 LEO1Q8WVC0 666 aaPredicted RBP6.05□□□□□ -1.44
LRCH3-212ENST00000466845 EDAQ92838 391 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 DHX58Q96C10 678 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 AMNQ9BXJ7 453 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 ACPTQ9BZG2 426 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 SIL1Q9H173 461 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 NELFAQ9H3P2 528 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 TTC12Q9H892 705 aaPredicted RBP6.05□□□□□ -1.44
LRCH3-212ENST00000466845 TM9SF3Q9HD45 589 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 CABP5Q9NP86 173 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 TOMM22Q9NS69 142 aa6.05□□□□□ -1.44
LRCH3-212ENST00000466845 SPATS2LQ9NUQ6 558 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms