RNA–Protein interactions for RNA: ENST00000466562.5

CRAMP1-204, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 4

Gene CRAMP1, Length 534 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-204ENST00000466562 PNKPQ96T60 521 aa16.71■□□□□ 0.27
CRAMP1-204ENST00000466562 SPHK2Q9NRA0 654 aa16.71■□□□□ 0.27
CRAMP1-204ENST00000466562 HESX1Q9UBX0 185 aa16.71■□□□□ 0.27
CRAMP1-204ENST00000466562 DNMT3LQ9UJW3 386 aa16.71■□□□□ 0.27
CRAMP1-204ENST00000466562 PCDHB4Q9Y5E5 795 aa16.71■□□□□ 0.27
CRAMP1-204ENST00000466562 WDR87Q6ZQQ6 2873 aa16.71■□□□□ 0.26
CRAMP1-204ENST00000466562 ANTXRLA6NF34 631 aa16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 RNF225M0QZC1 329 aaPredicted RBP16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 O00370 1275 aa16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 XPO1O14980 1071 aaKnown RBP16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 PAEPP09466 180 aa16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 RALAP11233 206 aa16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 PLA2G4AP47712 749 aa16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 PXNP49023 591 aaPredicted RBP16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 TKTL1P51854 596 aa16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 GOLGA8FQ08AF8 430 aa16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 GOLGA8DPQ0D2H9 430 aa16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 BST2Q10589 180 aaKnown RBP16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 C10orf120Q5SQS8 335 aa16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 PM20D1Q6GTS8 502 aa16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 RRAGAQ7L523 313 aa16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 SYT13Q7L8C5 426 aa16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 TADA2BQ86TJ2 420 aa16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 TMEM25Q86YD3 366 aa16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 ARHGEF19Q8IW93 802 aa16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 CAMKK1Q8N5S9 505 aa16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 CCDC26Q8TAB7 109 aa16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 UBA3Q8TBC4 463 aa16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 TFAP2BQ92481 460 aa16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 CLSTN2Q9H4D0 955 aa16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 NCDNQ9UBB6 729 aa16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 GPR179Q6PRD1 2367 aa16.7■□□□□ 0.26
CRAMP1-204ENST00000466562 A0A0A0MRY4 1105 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 CCDC163A0A0D9SF12 145 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 HOXC11O43248 304 aaPredicted RBP16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 KAT7O95251 611 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 ZBED1O96006 694 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 SEC13P55735 322 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 YWHAGP61981 247 aaKnown RBP eCLIP16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 GCNT1Q02742 428 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 SIM2Q14190 667 aaPredicted RBP16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 LPAL2Q16609 132 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 PKDCCQ504Y2 493 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 LCLAT1Q6UWP7 414 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 CLEC17AQ6ZS10 378 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 BHLHA9Q7RTU4 235 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 MIB1Q86YT6 1006 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 SFTPA1Q8IWL2 248 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 ETFBKMTQ8IXQ9 262 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 KIAA2013Q8IYS2 634 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 ARHGAP18Q8N392 663 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 MLKLQ8NB16 471 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 USP33Q8TEY7 942 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 ACDQ96AP0 544 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 CDK5RAP1Q96SZ6 601 aaKnown RBP16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 ZSWIM1Q9BR11 485 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 ULBP1Q9BZM6 244 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 INTS2Q9H0H0 1204 aaKnown RBP16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 ARHGEF4Q9NR80 690 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 LSM7Q9UK45 103 aaKnown RBP16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 EP300Q09472 2414 aaPredicted RBP16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 GVINP1Q7Z2Y8 2422 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 MYH10P35580 1976 aa16.69■□□□□ 0.26
CRAMP1-204ENST00000466562 OTOGLQ3ZCN5 2332 aa16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 STC2O76061 302 aa16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 APODP05090 189 aa16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 GRIA2P42262 883 aa16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 DMC1Q14565 340 aa16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 CNGA2Q16280 664 aa16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 ANO4Q32M45 955 aa16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 C2orf27AQ580R0 203 aa16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 BTBD8Q5XKL5 378 aa16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 Q6ZNB5 142 aa16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 PRR23BQ6ZRT6 265 aa16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 IRF2BP1Q8IU81 584 aa16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 CREBRFQ8IUR6 639 aa16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 PHTF2Q8N3S3 785 aa16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 NAT16Q8N8M0 369 aa16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 RBBP8NLQ8NC74 664 aaPredicted RBP16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 KCTD13Q8WZ19 329 aa16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 NDRG1Q92597 394 aaKnown RBP16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 CNOT6LQ96LI5 555 aaKnown RBP16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 KREMEN1Q96MU8 473 aa16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 HHIPQ96QV1 700 aa16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 LRRC4Q9HBW1 653 aa16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 RASAL2Q9UJF2 1139 aa16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 RAB23Q9ULC3 237 aa16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 ZNF292O60281 2723 aa16.68■□□□□ 0.26
CRAMP1-204ENST00000466562 TULP3O75386 442 aa16.67■□□□□ 0.26
CRAMP1-204ENST00000466562 CALCAP01258 141 aa16.67■□□□□ 0.26
CRAMP1-204ENST00000466562 SETSIPP0DME0 302 aa16.67■□□□□ 0.26
CRAMP1-204ENST00000466562 CHRM1P11229 460 aaPredicted RBP16.67■□□□□ 0.26
CRAMP1-204ENST00000466562 BRD2P25440 801 aaKnown RBP16.67■□□□□ 0.26
CRAMP1-204ENST00000466562 ZNF132P52740 706 aa16.67■□□□□ 0.26
CRAMP1-204ENST00000466562 MRPS21P82921 87 aaKnown RBP16.67■□□□□ 0.26
CRAMP1-204ENST00000466562 COG7P83436 770 aa16.67■□□□□ 0.26
CRAMP1-204ENST00000466562 KDSRQ06136 332 aa16.67■□□□□ 0.26
CRAMP1-204ENST00000466562 ADIGQ0VDE8 80 aa16.67■□□□□ 0.26
CRAMP1-204ENST00000466562 EFEMP1Q12805 493 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms