RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 UBE2TQ9NPD8 197 aaPredicted RBP10.51□□□□□ -0.73
PMF1-204ENST00000466489 NLRC4Q9NPP4 1024 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 CLEC1BQ9P126 229 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 GTF3C4Q9UKN8 822 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 KIAA1257Q9ULG3 409 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.51□□□□□ -0.73
PMF1-204ENST00000466489 YIPF1Q9Y548 306 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 ASB3Q9Y575 518 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 PCDHB4Q9Y5E5 795 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 FAM169AQ9Y6X4 670 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 A0A087X0T9 212 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 MYBPHLA2RUH7 354 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 TMCO5BA8MYB1 307 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 CCL16O15467 120 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 RFPL2O75678 378 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 ABL1P00519 1130 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 PAEPP09466 180 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 FAM228BP0C875 321 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 CD19P15391 556 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 GRIK1P39086 918 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 MAGEA11P43364 429 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 JAM2P57087 298 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 DLX2Q07687 328 aaPredicted RBP10.5□□□□□ -0.73
PMF1-204ENST00000466489 TWF1Q12792 350 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 CBX2Q14781 532 aaPredicted RBP10.5□□□□□ -0.73
PMF1-204ENST00000466489 STILQ15468 1287 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 SWT1Q5T5J6 900 aaKnown RBP10.5□□□□□ -0.73
PMF1-204ENST00000466489 CYP4A22Q5TCH4 519 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 ICE2Q659A1 982 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 SCARA3Q6AZY7 606 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 C11orf63Q6NUN7 778 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 FAM171BQ6P995 826 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 TMEM270Q6UE05 265 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 CCDC91Q7Z6B0 441 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 ACOT1Q86TX2 421 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 CRYBG2Q8N1P7 616 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 LRRC57Q8N9N7 239 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 ATAD1Q8NBU5 361 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 TPCN2Q8NHX9 752 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 CCHCR1Q8TD31 782 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 ELMO3Q96BJ8 720 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 PGM2Q96G03 612 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 PCED1BQ96HM7 432 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 TMEM176AQ96HP8 235 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 HES6Q96HZ4 224 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 HEXIM2Q96MH2 286 aaKnown RBP10.5□□□□□ -0.73
PMF1-204ENST00000466489 GCNAQ96QF7 691 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 TMEM209Q96SK2 561 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 CCDC77Q9BR77 488 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 TMEM109Q9BVC6 243 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 APOL5Q9BWW9 433 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 SDCBP2Q9H190 292 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 YY1AP1Q9H869 796 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 ASAH2Q9NR71 780 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 UVRAGQ9P2Y5 699 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 UXTQ9UBK9 157 aaPredicted RBP10.5□□□□□ -0.73
PMF1-204ENST00000466489 DMGDHQ9UI17 866 aaKnown RBP10.5□□□□□ -0.73
PMF1-204ENST00000466489 NR2E1Q9Y466 385 aa10.5□□□□□ -0.73
PMF1-204ENST00000466489 USP15Q9Y4E8 981 aaPredicted RBP10.5□□□□□ -0.73
PMF1-204ENST00000466489 ZNF197O14709 1029 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 THAP12O43422 761 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 MBTPS2O43462 519 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 ATP2C2O75185 946 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 FSBPO95073 299 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 NUDT17P0C025 328 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 FAM200BP0CF97 657 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 CSH1P0DML2 217 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 CSH2P0DML3 217 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 MYBL1P10243 752 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 HAPLN1P10915 354 aaPredicted RBP10.49□□□□□ -0.73
PMF1-204ENST00000466489 PTPN2P17706 415 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 SLC9A1P19634 815 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 LSP1P33241 339 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 ADCY2Q08462 1091 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 ZNF394Q53GI3 561 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 SGO2Q562F6 1265 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 SYCE2Q6PIF2 218 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 CCDC121Q6ZUS5 278 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 PDZD4Q76G19 769 aaPredicted RBP10.49□□□□□ -0.73
PMF1-204ENST00000466489 LRRTM3Q86VH5 581 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.49□□□□□ -0.73
PMF1-204ENST00000466489 SCN4BQ8IWT1 228 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 C12orf76Q8N812 135 aaPredicted RBP10.49□□□□□ -0.73
PMF1-204ENST00000466489 LMO3Q8TAP4 145 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 MAGEC3Q8TD91 643 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 GRK7Q8WTQ7 553 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 CYFIP2Q96F07 1278 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 ZIM3Q96PE6 472 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 PHACTR1Q9C0D0 580 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 DPEP3Q9H4B8 488 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 TMBIM4Q9HC24 238 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 DMAP1Q9NPF5 467 aaPredicted RBP10.49□□□□□ -0.73
PMF1-204ENST00000466489 CRTAC1Q9NQ79 661 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 KRT82Q9NSB4 513 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 HESX1Q9UBX0 185 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 PRKAG3Q9UGI9 489 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 NFU1Q9UMS0 254 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 SLC27A5Q9Y2P5 690 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 DENND4AQ7Z401 1863 aa10.49□□□□□ -0.73
PMF1-204ENST00000466489 A0A0U1RQJ8 604 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms