RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 FANCLQ9NW38 375 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 UXTQ9UBK9 157 aaPredicted RBP7.35□□□□□ -1.23
CLDN4-204ENST00000466411 NXF1Q9UBU9 619 aaKnown RBP7.35□□□□□ -1.23
CLDN4-204ENST00000466411 FBXW11Q9UKB1 542 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 L1RE1Q9UN81 338 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 PCDHB5Q9Y5E4 795 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 PCDHGA5Q9Y5G8 931 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 PTPRQQ9UMZ3 2332 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 DOPEY2Q9Y3R5 2298 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 PTPRDP23468 1912 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 MYO9AB2RTY4 2548 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 A0A1W2PQC6 194 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 ATXN7O15265 892 aaPredicted RBP7.34□□□□□ -1.23
CLDN4-204ENST00000466411 MED7O43513 233 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 CST3P01034 146 aaPredicted RBP7.34□□□□□ -1.23
CLDN4-204ENST00000466411 PAEPP09466 180 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 TPM1P09493 284 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 ANXA13P27216 316 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 SOX11P35716 441 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 MPLP40238 635 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 ASPAP45381 313 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 PDE6CP51160 858 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 GUCY2FP51841 1108 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 EPHB3P54753 998 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 WNT7BP56706 349 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 ROR1Q01973 937 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 MMRN1Q13201 1228 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 PPP2R5DQ14738 602 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 KRT31Q15323 416 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 PPM1LQ5SGD2 360 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 WSCD1Q658N2 575 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 IQCEQ6IPM2 695 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 PPP1R2P3Q6NXS1 205 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 PRSS55Q6UWB4 352 aaPredicted RBP7.34□□□□□ -1.23
CLDN4-204ENST00000466411 CD300LGQ6UXG3 332 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 GET4Q7L5D6 327 aaPredicted RBP7.34□□□□□ -1.23
CLDN4-204ENST00000466411 KBTBD6Q86V97 674 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 WDR5BQ86VZ2 330 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 SPATA2LQ8IUW3 424 aaPredicted RBP7.34□□□□□ -1.23
CLDN4-204ENST00000466411 DHX40Q8IX18 779 aaKnown RBP7.34□□□□□ -1.23
CLDN4-204ENST00000466411 CRYBG2Q8N1P7 616 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 PPM1KQ8N3J5 372 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 B3GALNT2Q8NCR0 500 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 ARMC2Q8NEN0 867 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 OR6B3Q8NGW1 331 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 SMARCD1Q96GM5 515 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 ZC3H10Q96K80 434 aaKnown RBP7.34□□□□□ -1.23
CLDN4-204ENST00000466411 UCN2Q96RP3 112 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 ERGIC2Q96RQ1 377 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 UBL7Q96S82 380 aaPredicted RBP7.34□□□□□ -1.23
CLDN4-204ENST00000466411 SYT15Q9BQS2 421 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 CLSTN3Q9BQT9 956 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 EDEM2Q9BV94 578 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 NUP58Q9BVL2 599 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 PLA2G2FQ9BZM2 168 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 INTS2Q9H0H0 1204 aaKnown RBP7.34□□□□□ -1.23
CLDN4-204ENST00000466411 LMAN1LQ9HAT1 526 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 PNPLA8Q9NP80 782 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 SAMSN1Q9NSI8 373 aaKnown RBP7.34□□□□□ -1.23
CLDN4-204ENST00000466411 COMMD8Q9NX08 183 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 CDH7Q9ULB5 785 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 MYO6Q9UM54 1294 aa7.34□□□□□ -1.23
CLDN4-204ENST00000466411 MRPS17Q9Y2R5 130 aaKnown RBP7.34□□□□□ -1.23
CLDN4-204ENST00000466411 UBR5O95071 2799 aaPredicted RBP7.34□□□□□ -1.23
CLDN4-204ENST00000466411 ATMQ13315 3056 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 PI4KAP42356 2102 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 LNP1A1A4G5 178 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 RNF223E7ERA6 249 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 F8W810 466 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 I3L4J1 428 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 ZNF197O14709 1029 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 PPEF2O14830 753 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 TGM5O43548 720 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 CILPO75339 1184 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 MICAL2O94851 1124 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 C8AP07357 584 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 PPP3CCP48454 512 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 COPB1P53618 953 aaKnown RBP7.33□□□□□ -1.24
CLDN4-204ENST00000466411 UBXN1Q04323 297 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 TRIM14Q14142 442 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 NCAPHQ15003 741 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 IQCB1Q15051 598 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 TAF12Q16514 161 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 SLC39A12Q504Y0 691 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 SGO2Q562F6 1265 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 MIIPQ5JXC2 388 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 DAB2IPQ5VWQ8 1189 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 FAM171BQ6P995 826 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 LILRA6Q6PI73 481 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 TAS1R1Q7RTX1 841 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 RAB44Q7Z6P3 723 aaPredicted RBP7.33□□□□□ -1.24
CLDN4-204ENST00000466411 SPEM1Q8N4L4 309 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 LSM14AQ8ND56 463 aaKnown RBP7.33□□□□□ -1.24
CLDN4-204ENST00000466411 PDZD8Q8NEN9 1154 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 DEFB124Q8NES8 71 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 ZNF397Q8NF99 534 aaPredicted RBP7.33□□□□□ -1.24
CLDN4-204ENST00000466411 NEK11Q8NG66 645 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 KBTBD7Q8WVZ9 684 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 RABGGTAQ92696 567 aa7.33□□□□□ -1.24
CLDN4-204ENST00000466411 FGF13Q92913 245 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms