RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 KLC2Q9H0B6 622 aa17■□□□□ 0.31
SLX4-202ENST00000466154 TXLNGQ9NUQ3 528 aa17■□□□□ 0.31
SLX4-202ENST00000466154 EFR3BQ9Y2G0 817 aa17■□□□□ 0.31
SLX4-202ENST00000466154 MGAMO43451 1857 aa17■□□□□ 0.31
SLX4-202ENST00000466154 PDHXO00330 501 aa16.99■□□□□ 0.31
SLX4-202ENST00000466154 CYP2F1P24903 491 aa16.99■□□□□ 0.31
SLX4-202ENST00000466154 PCK1P35558 622 aa16.99■□□□□ 0.31
SLX4-202ENST00000466154 FAM47CQ5HY64 1035 aa16.99■□□□□ 0.31
SLX4-202ENST00000466154 MDH1BQ5I0G3 518 aa16.99■□□□□ 0.31
SLX4-202ENST00000466154 CYP4V2Q6ZWL3 525 aaPredicted RBP16.99■□□□□ 0.31
SLX4-202ENST00000466154 TSSK1BQ9BXA7 367 aa16.99■□□□□ 0.31
SLX4-202ENST00000466154 PIN4Q9Y237 131 aaKnown RBP16.99■□□□□ 0.31
SLX4-202ENST00000466154 COPEO14579 308 aa16.99■□□□□ 0.31
SLX4-202ENST00000466154 NDC80O14777 642 aa16.99■□□□□ 0.31
SLX4-202ENST00000466154 DIAPH2O60879 1101 aa16.99■□□□□ 0.31
SLX4-202ENST00000466154 ANP32DO95626 131 aa16.99■□□□□ 0.31
SLX4-202ENST00000466154 EPHB2P29323 1055 aa16.99■□□□□ 0.31
SLX4-202ENST00000466154 SLC6A3Q01959 620 aa16.99■□□□□ 0.31
SLX4-202ENST00000466154 SNAPC2Q13487 334 aa16.99■□□□□ 0.31
SLX4-202ENST00000466154 DENND5BQ6ZUT9 1274 aa16.99■□□□□ 0.31
SLX4-202ENST00000466154 AGGF1Q8N302 714 aaeCLIP16.99■□□□□ 0.31
SLX4-202ENST00000466154 MPP5Q8N3R9 675 aa16.99■□□□□ 0.31
SLX4-202ENST00000466154 PQLC3Q8N755 202 aa16.99■□□□□ 0.31
SLX4-202ENST00000466154 C16orf70Q9BSU1 422 aa16.99■□□□□ 0.31
SLX4-202ENST00000466154 TOP3BO95985 862 aaKnown RBP16.98■□□□□ 0.31
SLX4-202ENST00000466154 AMPD1P23109 780 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 ACAT1P24752 427 aaKnown RBP16.98■□□□□ 0.31
SLX4-202ENST00000466154 GABRB2P47870 512 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 YWHAZP63104 245 aaKnown RBP16.98■□□□□ 0.31
SLX4-202ENST00000466154 PLEKHG4Q58EX7 1191 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 OLFML1Q6UWY5 402 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 GBA2Q9HCG7 927 aaPredicted RBP16.98■□□□□ 0.31
SLX4-202ENST00000466154 FBXO6Q9NRD1 293 aaPredicted RBP16.98■□□□□ 0.31
SLX4-202ENST00000466154 IL1RAPL1Q9NZN1 696 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 PAK5Q9P286 719 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 SLC17A6Q9P2U8 582 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 NME7Q9Y5B8 376 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 PAPPA2Q9BXP8 1791 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 A0A1B0GUA9 196 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 DCTN3O75935 186 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 IL4RP24394 825 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 LONP2Q86WA8 852 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 UNC5BQ8IZJ1 945 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 CCNYQ8ND76 341 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 ARMC2Q8NEN0 867 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 SGIP1Q9BQI5 828 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 PCMTD2Q9NV79 361 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 ETNK2Q9NVF9 386 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 HEY2Q9UBP5 337 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 CREB3O43889 395 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 RECQL4O94761 1208 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 SMPD1P17405 629 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 YY1P25490 414 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 HDAC4P56524 1084 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 NME3Q13232 169 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 MOGSQ13724 837 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 BOLA3Q53S33 107 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 TRMT10BQ6PF06 316 aaKnown RBP16.98■□□□□ 0.31
SLX4-202ENST00000466154 NME8Q8N427 588 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 BANPQ8N9N5 519 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 PPTC7Q8NI37 304 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 ZNF395Q9H8N7 513 aaPredicted RBP16.98■□□□□ 0.31
SLX4-202ENST00000466154 USP29Q9HBJ7 922 aa16.98■□□□□ 0.31
SLX4-202ENST00000466154 METTL18O95568 372 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 SESN2P58004 480 aaPredicted RBP16.97■□□□□ 0.31
SLX4-202ENST00000466154 SESN3P58005 492 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 CCNA1P78396 465 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 PREPLQ4J6C6 727 aaPredicted RBP16.97■□□□□ 0.31
SLX4-202ENST00000466154 CDHR3Q6ZTQ4 885 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 RFX8Q6ZV50 586 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 CCDC185Q8N715 623 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 SLC2A14Q8TDB8 520 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 NSMCE1Q8WV22 266 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 C10orf82Q8WW14 230 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 PGLYRP2Q96PD5 576 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 ARHGEF3Q9NR81 526 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 C2CD2Q9Y426 696 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 CYB561D2O14569 222 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 CPA2P48052 419 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 KCNJ11Q14654 390 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 SOWAHAQ2M3V2 549 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 KCNT2Q6UVM3 1135 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 VPS52Q8N1B4 723 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 BEST2Q8NFU1 509 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 LGMNQ99538 433 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 MAF1Q9H063 256 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 SNX25Q9H3E2 840 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 ZMYND8Q9ULU4 1186 aaPredicted RBP16.97■□□□□ 0.31
SLX4-202ENST00000466154 AP4E1Q9UPM8 1137 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 KCNH4Q9UQ05 1017 aa16.97■□□□□ 0.31
SLX4-202ENST00000466154 MYO18AQ92614 2054 aaKnown RBP16.97■□□□□ 0.31
SLX4-202ENST00000466154 CLDN5O00501 218 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 F7P08709 466 aaPredicted RBP16.96■□□□□ 0.31
SLX4-202ENST00000466154 GOT1P17174 413 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 EPHX2P34913 555 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 DNAJB3Q8WWF6 145 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 PRR11Q96HE9 360 aaPredicted RBP16.96■□□□□ 0.31
SLX4-202ENST00000466154 TRIM55Q9BYV6 548 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 FRMD8P1Q9BZ68 369 aaPredicted RBP16.96■□□□□ 0.31
SLX4-202ENST00000466154 RNF39Q9H2S5 420 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms