RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 CD93Q9NPY3 652 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 LRRK2Q5S007 2527 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 MYH10P35580 1976 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 C2orf78A6NCI8 922 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 ATP2C2O75185 946 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 NDUFS2O75306 463 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 TMEM191BP0C7N4 346 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 PCSK1P29120 753 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 MATKP42679 507 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 TLE3Q04726 772 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 SLC39A14Q15043 492 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 CFAP221Q4G0U5 840 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 WDR45BQ5MNZ6 344 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 FAM171BQ6P995 826 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 GPD1LQ8N335 351 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 ZCCHC9Q8N567 271 aaKnown RBP10.37□□□□□ -0.75
USP39-212ENST00000465514 PDILTQ8N807 584 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 OR5B17Q8NGF7 314 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 ERLEC1Q96DZ1 483 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 FUBP3Q96I24 572 aaKnown RBP eCLIP10.37□□□□□ -0.75
USP39-212ENST00000465514 HPDLQ96IR7 371 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 ANKRD36BP1Q96IX9 119 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 ARHGEF4Q9NR80 690 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 INTS13Q9NVM9 706 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 GCNT4Q9P109 453 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.37□□□□□ -0.75
USP39-212ENST00000465514 R3HCC1Q9Y3T6 440 aaKnown RBP10.37□□□□□ -0.75
USP39-212ENST00000465514 AK5Q9Y6K8 562 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 NBPF19A0A087WUL8 3843 aa10.37□□□□□ -0.75
USP39-212ENST00000465514 ANKRD17O75179 2603 aaKnown RBP10.37□□□□□ -0.75
USP39-212ENST00000465514 PTPRJQ12913 1337 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 A0A1B0GTW7 788 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 ZNF233A6NK53 670 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 MEI4A8MW99 385 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 SCAMP3O14828 347 aaKnown RBP10.36□□□□□ -0.75
USP39-212ENST00000465514 TNFSF14O43557 240 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 ZNF217O75362 1048 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 TNNC2P02585 160 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 CENPBP07199 599 aaPredicted RBP10.36□□□□□ -0.75
USP39-212ENST00000465514 C6P13671 934 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 HOXB2P14652 356 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 NDUFV2P19404 249 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 LMO2P25791 158 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 IL12RB1P42701 662 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 WASP42768 502 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 MAGEA11P43364 429 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 CLDN6P56747 220 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 PSMC1P62191 440 aaKnown RBP10.36□□□□□ -0.75
USP39-212ENST00000465514 BNC1Q01954 994 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 LY6DQ14210 128 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 KCNB1Q14721 858 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 PTPRNQ16849 979 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 DUOXA2Q1HG44 320 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 HLA-BQ31612 363 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 C6orf118Q5T5N4 469 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 C4orf50Q6ZRC1 276 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 DPH6Q7L8W6 267 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 LIMS2Q7Z4I7 341 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 FILIP1Q7Z7B0 1213 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 TMPRSS12Q86WS5 348 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 CBWD2Q8IUF1 395 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 CCDC65Q8IXS2 484 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 FSIP1Q8NA03 581 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 SNIP1Q8TAD8 396 aaKnown RBP10.36□□□□□ -0.75
USP39-212ENST00000465514 KBTBD7Q8WVZ9 684 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 FOXJ1Q92949 421 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 HPS3Q969F9 1004 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 USP28Q96RU2 1077 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 SYT15Q9BQS2 421 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 CRTAC1Q9NQ79 661 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 MAGEC2Q9UBF1 373 aaPredicted RBP10.36□□□□□ -0.75
USP39-212ENST00000465514 ARHGAP26Q9UNA1 814 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 MTMR6Q9Y217 621 aa10.36□□□□□ -0.75
USP39-212ENST00000465514 MORC2Q9Y6X9 1032 aaPredicted RBP10.36□□□□□ -0.75
USP39-212ENST00000465514 NOTCH2Q04721 2471 aa10.35□□□□□ -0.75
USP39-212ENST00000465514 AHCTF1Q8WYP5 2266 aa10.35□□□□□ -0.75
USP39-212ENST00000465514 A0A1W2PQF6 199 aa10.35□□□□□ -0.75
USP39-212ENST00000465514 KIAA0391O15091 583 aaKnown RBP10.35□□□□□ -0.75
USP39-212ENST00000465514 PDGFRBP09619 1106 aa10.35□□□□□ -0.75
USP39-212ENST00000465514 TCF3P15923 654 aa10.35□□□□□ -0.75
USP39-212ENST00000465514 HDCP19113 662 aa10.35□□□□□ -0.75
USP39-212ENST00000465514 BDNFP23560 247 aa10.35□□□□□ -0.75
USP39-212ENST00000465514 HOXD13P35453 343 aa10.35□□□□□ -0.75
USP39-212ENST00000465514 EIF2DP41214 584 aaKnown RBP10.35□□□□□ -0.75
USP39-212ENST00000465514 GRIA2P42262 883 aa10.35□□□□□ -0.75
USP39-212ENST00000465514 TNFRSF4P43489 277 aa10.35□□□□□ -0.75
USP39-212ENST00000465514 CSRP3P50461 194 aa10.35□□□□□ -0.75
USP39-212ENST00000465514 ZXDBP98169 803 aa10.35□□□□□ -0.75
USP39-212ENST00000465514 CCDC173Q0VFZ6 552 aa10.35□□□□□ -0.75
USP39-212ENST00000465514 DHCR24Q15392 516 aa10.35□□□□□ -0.75
USP39-212ENST00000465514 SURF1Q15526 300 aa10.35□□□□□ -0.75
USP39-212ENST00000465514 PREPLQ4J6C6 727 aaPredicted RBP10.35□□□□□ -0.75
USP39-212ENST00000465514 DBX2Q6ZNG2 339 aa10.35□□□□□ -0.75
USP39-212ENST00000465514 STXBP4Q6ZWJ1 553 aa10.35□□□□□ -0.75
USP39-212ENST00000465514 SPACA3Q8IXA5 215 aa10.35□□□□□ -0.75
USP39-212ENST00000465514 PHTF2Q8N3S3 785 aa10.35□□□□□ -0.75
USP39-212ENST00000465514 ZNF513Q8N8E2 541 aaPredicted RBP10.35□□□□□ -0.75
USP39-212ENST00000465514 MYLPFQ96A32 169 aa10.35□□□□□ -0.75
USP39-212ENST00000465514 WBP1Q96G27 269 aa10.35□□□□□ -0.75
USP39-212ENST00000465514 SPATA17Q96L03 361 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms