RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 FBXO44Q9H4M3 255 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 COMMD8Q9NX08 183 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 STRIP2Q9ULQ0 834 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 ASB3Q9Y575 518 aa17.74■□□□□ 0.43
EXOSC3-203ENST00000465229 TCRBV5S1A1TA0A578 114 aa17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 LINC01565O15544 149 aa17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 FBXO21O94952 628 aa17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 HNRNPA1P09651 372 aaKnown RBP eCLIP17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 MYBL1P10243 752 aa17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 YWHAQP27348 245 aa17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 DAOAP59103 153 aa17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 GPC5P78333 572 aa17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 MRPS5P82675 430 aaKnown RBP17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 ADAM15Q13444 863 aa17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 ELMSAN1Q6PJG2 1045 aa17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 OLFML1Q6UWY5 402 aa17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 ZDHHC17Q8IUH5 632 aa17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 SCML4Q8N228 414 aa17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 SLC35G2Q8TBE7 412 aa17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 CASP10Q92851 521 aa17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 ARHGEF26Q96DR7 871 aa17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 TRIM11Q96F44 468 aa17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 PIWIL1Q96J94 861 aaKnown RBP17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 CDX2Q99626 313 aaPredicted RBP17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 ZDHHC7Q9NXF8 308 aa17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 WDR35Q9P2L0 1181 aa17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 CNOT8Q9UFF9 292 aaKnown RBP17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 MAGED2Q9UNF1 606 aaPredicted RBP17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 SCML2Q9UQR0 700 aa17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 MTCL1Q9Y4B5 1905 aaKnown RBP17.73■□□□□ 0.43
EXOSC3-203ENST00000465229 ATMINO43313 823 aaPredicted RBP17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 CYP1A2P05177 515 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 GSCP56915 257 aaPredicted RBP17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 SLC6A3Q01959 620 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 TAF12Q16514 161 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 PLEKHA7Q6IQ23 1121 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 BHLHA9Q7RTU4 235 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 ITIH5Q86UX2 942 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 C12orf76Q8N812 135 aaPredicted RBP17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 C3orf20Q8ND61 904 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 FEZF2Q8TBJ5 459 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 KHSRPQ92945 711 aaKnown RBP eCLIP17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 ZNF707Q96C28 371 aaPredicted RBP17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 ZNF512Q96ME7 567 aaPredicted RBP17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 AVENQ9NQS1 362 aaPredicted RBP17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 BRWD1Q9NSI6 2320 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 EYSQ5T1H1 3165 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 CCDC195A0A1B0GUA6 201 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 YJEFN3A6XGL0 299 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 E7ENQ6 273 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 GOLGA8SH3BPF8 625 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 MTA2O94776 668 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 PAPLNO95428 1278 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 CXCR5P32302 372 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 PGFP49763 221 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 TAF10Q12962 218 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 MAMLD1Q13495 774 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 TAF5Q15542 800 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 GLE1Q53GS7 698 aaKnown RBP17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 DEFB123Q8N688 67 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 MYLIPQ8WY64 445 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 FBXO32Q969P5 355 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 TRMT2BQ96GJ1 504 aaKnown RBP17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 LRRC3Q9BY71 257 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 PRKD2Q9BZL6 878 aa17.72■□□□□ 0.43
EXOSC3-203ENST00000465229 SPDYE4A6NLX3 237 aa17.71■□□□□ 0.43
EXOSC3-203ENST00000465229 GJB6O95452 261 aa17.71■□□□□ 0.43
EXOSC3-203ENST00000465229 VSNL1P62760 191 aa17.71■□□□□ 0.43
EXOSC3-203ENST00000465229 LONRF2Q1L5Z9 754 aa17.71■□□□□ 0.43
EXOSC3-203ENST00000465229 CTC1Q2NKJ3 1217 aa17.71■□□□□ 0.43
EXOSC3-203ENST00000465229 BEND6Q5SZJ8 279 aaPredicted RBP17.71■□□□□ 0.43
EXOSC3-203ENST00000465229 FAM102AQ5T9C2 384 aaPredicted RBP17.71■□□□□ 0.43
EXOSC3-203ENST00000465229 HFE2Q6ZVN8 426 aa17.71■□□□□ 0.43
EXOSC3-203ENST00000465229 SLC26A9Q7LBE3 791 aa17.71■□□□□ 0.43
EXOSC3-203ENST00000465229 PEX26Q7Z412 305 aa17.71■□□□□ 0.43
EXOSC3-203ENST00000465229 SCD5Q86SK9 330 aa17.71■□□□□ 0.43
EXOSC3-203ENST00000465229 NT5DC3Q86UY8 548 aa17.71■□□□□ 0.43
EXOSC3-203ENST00000465229 MON1AQ86VX9 555 aa17.71■□□□□ 0.43
EXOSC3-203ENST00000465229 ELMOD1Q8N336 334 aa17.71■□□□□ 0.43
EXOSC3-203ENST00000465229 IRGQQ8WZA9 623 aa17.71■□□□□ 0.43
EXOSC3-203ENST00000465229 GUCD1Q96NT3 240 aa17.71■□□□□ 0.43
EXOSC3-203ENST00000465229 SELENOOQ9BVL4 669 aa17.71■□□□□ 0.43
EXOSC3-203ENST00000465229 ZNF334Q9HCZ1 680 aaPredicted RBP17.71■□□□□ 0.43
EXOSC3-203ENST00000465229 PARVAQ9NVD7 372 aa17.71■□□□□ 0.43
EXOSC3-203ENST00000465229 DZANK1Q9NVP4 752 aa17.71■□□□□ 0.43
EXOSC3-203ENST00000465229 EHD2Q9NZN4 543 aa17.71■□□□□ 0.43
EXOSC3-203ENST00000465229 SIGLEC16A6NMB1 481 aa17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 SART1O43290 800 aaKnown RBP17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 XYLBO75191 536 aa17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 POU2F2P09086 479 aa17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 SCNN1AP37088 669 aa17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 COL19A1Q14993 1142 aa17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 EFHC1Q5JVL4 640 aa17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 PPP1R15BQ5SWA1 713 aa17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 ANKRD54Q6NXT1 300 aa17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 DNAJC24Q6P3W2 148 aa17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 TMC5Q6UXY8 1006 aa17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 DAAM2Q86T65 1068 aa17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 HS6ST3Q8IZP7 471 aa17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 MICALL1Q8N3F8 863 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms