RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 HHATQ5VTY9 493 aa19.45■□□□□ 0.7
TSPAN4-210ENST00000464987 RNF43Q68DV7 783 aa19.45■□□□□ 0.7
TSPAN4-210ENST00000464987 SLC9A4Q6AI14 798 aa19.45■□□□□ 0.7
TSPAN4-210ENST00000464987 MAP7D3Q8IWC1 876 aa19.45■□□□□ 0.7
TSPAN4-210ENST00000464987 BEST2Q8NFU1 509 aa19.45■□□□□ 0.7
TSPAN4-210ENST00000464987 CCDC110Q8TBZ0 833 aa19.45■□□□□ 0.7
TSPAN4-210ENST00000464987 PTPN18Q99952 460 aa19.45■□□□□ 0.7
TSPAN4-210ENST00000464987 PPCSQ9HAB8 311 aa19.45■□□□□ 0.7
TSPAN4-210ENST00000464987 FETUBQ9UGM5 382 aa19.45■□□□□ 0.7
TSPAN4-210ENST00000464987 CLEC11AQ9Y240 323 aa19.45■□□□□ 0.7
TSPAN4-210ENST00000464987 FAM155BO75949 473 aa19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 YWHAGP61981 247 aaKnown RBP eCLIP19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 NOTUMQ6P988 496 aa19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 LRRC8CQ8TDW0 803 aa19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 DNAJB3Q8WWF6 145 aa19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 NDRG1Q92597 394 aaKnown RBP19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 TRIM56Q9BRZ2 755 aaKnown RBP19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 TRIM6Q9C030 488 aaPredicted RBP19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 DERAQ9Y315 318 aa19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 STARD13Q9Y3M8 1113 aa19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 EDF1O60869 148 aaKnown RBP19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 CYP2C9P11712 490 aa19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 CYP2F1P24903 491 aa19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 GTF2A2P52657 109 aa19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 YWHAZP63104 245 aaKnown RBP19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 GBE1Q04446 702 aa19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 SOX4Q06945 474 aaPredicted RBP19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 RGS9BPQ6ZS82 235 aa19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 ZNF276Q8N554 614 aa19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 TEKT4Q8WW24 435 aa19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 CFAP36Q96G28 342 aa19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 SERAC1Q96JX3 654 aa19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 FAM124BQ9H5Z6 455 aaPredicted RBP19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 ALG13Q9NP73 1137 aaKnown RBP19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 SLC5A4Q9NY91 659 aa19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 CNTN3Q9P232 1028 aa19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 MFHAS1Q9Y4C4 1052 aa19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 BRCA2P51587 3418 aa19.44■□□□□ 0.7
TSPAN4-210ENST00000464987 IGF2BP3O00425 579 aaKnown RBP eCLIP19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 CHADO15335 359 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 ZBED1O96006 694 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 DARSP14868 501 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 TGM2P21980 687 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 L1CAMP32004 1257 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 SNCBQ16143 134 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 PNMA8AQ86V59 439 aaPredicted RBP19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 CCDC185Q8N715 623 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 LRRC52Q8N7C0 313 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 BANPQ8N9N5 519 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 ZNF75CPQ92670 426 aaPredicted RBP19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 GRAMD1AQ96CP6 724 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 DHX35Q9H5Z1 703 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 NRDE2Q9H7Z3 1164 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 PLAC1Q9HBJ0 212 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 ETNK1Q9HBU6 452 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 PAK5Q9P286 719 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 PIN4Q9Y237 131 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 SMAPO00193 183 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 MDM4O15151 490 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 C1QAP02745 245 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 FAAP100Q0VG06 881 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 PTK7Q13308 1070 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 IQSEC1Q6DN90 963 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 OTOAQ7RTW8 1153 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 CAND1Q86VP6 1230 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 RTP4Q96DX8 246 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 CYTH2Q99418 400 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 C11orf84Q9BUA3 381 aaPredicted RBP19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 MYLK2Q9H1R3 596 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 ETNK2Q9NVF9 386 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 MTMR10Q9NXD2 777 aa19.43■□□□□ 0.7
TSPAN4-210ENST00000464987 SCN4AP35499 1836 aa19.42■□□□□ 0.7
TSPAN4-210ENST00000464987 SMIM28A0A1B0GU29 152 aa19.42■□□□□ 0.7
TSPAN4-210ENST00000464987 GLTPD2A6NH11 291 aa19.42■□□□□ 0.7
TSPAN4-210ENST00000464987 RRN3P2A6NIE6 340 aa19.42■□□□□ 0.7
TSPAN4-210ENST00000464987 PIRO00625 290 aa19.42■□□□□ 0.7
TSPAN4-210ENST00000464987 APRTP07741 180 aa19.42■□□□□ 0.7
TSPAN4-210ENST00000464987 SETSIPP0DME0 302 aa19.42■□□□□ 0.7
TSPAN4-210ENST00000464987 NQO1P15559 274 aaKnown RBP19.42■□□□□ 0.7
TSPAN4-210ENST00000464987 IGFBP6P24592 240 aaPredicted RBP19.42■□□□□ 0.7
TSPAN4-210ENST00000464987 FBXO47Q5MNV8 452 aa19.42■□□□□ 0.7
TSPAN4-210ENST00000464987 ARHGAP17Q68EM7 881 aa19.42■□□□□ 0.7
TSPAN4-210ENST00000464987 PLEKHH3Q7Z736 793 aa19.42■□□□□ 0.7
TSPAN4-210ENST00000464987 PYROXD2Q8N2H3 581 aa19.42■□□□□ 0.7
TSPAN4-210ENST00000464987 NETO2Q8NC67 525 aa19.42■□□□□ 0.7
TSPAN4-210ENST00000464987 ZNF670Q9BS34 389 aa19.42■□□□□ 0.7
TSPAN4-210ENST00000464987 CHKBQ9Y259 395 aa19.42■□□□□ 0.7
TSPAN4-210ENST00000464987 SLC45A1Q9Y2W3 748 aa19.42■□□□□ 0.7
TSPAN4-210ENST00000464987 BCLAF3A2AJT9 711 aaKnown RBP19.41■□□□□ 0.7
TSPAN4-210ENST00000464987 CXorf49A8MYA2 514 aaPredicted RBP19.41■□□□□ 0.7
TSPAN4-210ENST00000464987 KPNA7A9QM74 516 aa19.41■□□□□ 0.7
TSPAN4-210ENST00000464987 TREHO43280 583 aa19.41■□□□□ 0.7
TSPAN4-210ENST00000464987 ZWINTO95229 277 aa19.41■□□□□ 0.7
TSPAN4-210ENST00000464987 METTL18O95568 372 aa19.41■□□□□ 0.7
TSPAN4-210ENST00000464987 F2P00734 622 aa19.41■□□□□ 0.7
TSPAN4-210ENST00000464987 TKTP29401 623 aaKnown RBP19.41■□□□□ 0.7
TSPAN4-210ENST00000464987 ANKRD23Q86SG2 305 aa19.41■□□□□ 0.7
TSPAN4-210ENST00000464987 UNC93AQ86WB7 457 aa19.41■□□□□ 0.7
TSPAN4-210ENST00000464987 GBP7Q8N8V2 638 aaPredicted RBP19.41■□□□□ 0.7
TSPAN4-210ENST00000464987 SLC2A14Q8TDB8 520 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms