RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 RSRC2Q7L4I2 434 aaKnown RBP15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 TMEM35BQ8NCS4 154 aa15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 C1orf131Q8NDD1 294 aaKnown RBP15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 CSGALNACT1Q8TDX6 532 aa15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 CLEC4CQ8WTT0 213 aa15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 OSCP1Q8WVF1 389 aa15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 GOLGA1Q92805 767 aa15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 PBXIP1Q96AQ6 731 aa15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 ZFRQ96KR1 1074 aaKnown RBP15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 CPXM1Q96SM3 734 aa15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 FAM83CQ9BQN1 747 aa15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 NUP58Q9BVL2 599 aa15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 EDEM3Q9BZQ6 932 aa15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 ARHGEF3Q9NR81 526 aa15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 ABCC13Q9NSE7 274 aa15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 NOCTQ9UK39 431 aaKnown RBP15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 MYO6Q9UM54 1294 aa15.22■□□□□ 0.03
SQSTM1-205ENST00000464493 MDM4O15151 490 aa15.21■□□□□ 0.03
SQSTM1-205ENST00000464493 SART1O43290 800 aaKnown RBP15.21■□□□□ 0.03
SQSTM1-205ENST00000464493 MMEP08473 750 aa15.21■□□□□ 0.03
SQSTM1-205ENST00000464493 CCDC172P0C7W6 258 aa15.21■□□□□ 0.03
SQSTM1-205ENST00000464493 CDH5P33151 784 aaPredicted RBP15.21■□□□□ 0.03
SQSTM1-205ENST00000464493 SNX16P57768 344 aa15.21■□□□□ 0.03
SQSTM1-205ENST00000464493 CDR2Q01850 454 aa15.21■□□□□ 0.03
SQSTM1-205ENST00000464493 PDGFRLQ15198 375 aa15.21■□□□□ 0.03
SQSTM1-205ENST00000464493 MLF2Q15773 248 aaPredicted RBP15.21■□□□□ 0.03
SQSTM1-205ENST00000464493 FIGNQ5HY92 759 aa15.21■□□□□ 0.03
SQSTM1-205ENST00000464493 HFE2Q6ZVN8 426 aa15.21■□□□□ 0.03
SQSTM1-205ENST00000464493 BMP8AQ7Z5Y6 402 aa15.21■□□□□ 0.03
SQSTM1-205ENST00000464493 FMNL3Q8IVF7 1028 aa15.21■□□□□ 0.03
SQSTM1-205ENST00000464493 KIAA1958Q8N8K9 716 aa15.21■□□□□ 0.03
SQSTM1-205ENST00000464493 SLC20A1Q8WUM9 679 aa15.21■□□□□ 0.03
SQSTM1-205ENST00000464493 BAP1Q92560 729 aa15.21■□□□□ 0.03
SQSTM1-205ENST00000464493 SHDQ96IW2 340 aa15.21■□□□□ 0.03
SQSTM1-205ENST00000464493 KLF16Q9BXK1 252 aaPredicted RBP15.21■□□□□ 0.03
SQSTM1-205ENST00000464493 XPO4Q9C0E2 1151 aaKnown RBP15.21■□□□□ 0.03
SQSTM1-205ENST00000464493 HEBP1Q9NRV9 189 aa15.21■□□□□ 0.03
SQSTM1-205ENST00000464493 DUS2Q9NX74 493 aaKnown RBP15.21■□□□□ 0.03
SQSTM1-205ENST00000464493 CFAP97Q9P2B7 532 aa15.21■□□□□ 0.03
SQSTM1-205ENST00000464493 TICRRQ7Z2Z1 1910 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 PRR33A8MZF0 331 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 PAPSS1O43252 624 aaPredicted RBP15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 CBFA2T2O43439 604 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 LSM8O95777 96 aaKnown RBP15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 LTFP02788 710 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 FERP16591 822 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 CHRNB2P17787 502 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 IFNAR2P48551 515 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 PRKCQQ04759 706 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 TNK2Q07912 1038 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 GOLGA8FQ08AF8 430 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 GOLGA8DPQ0D2H9 430 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 EFEMP1Q12805 493 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 TRIM68Q6AZZ1 485 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 IRF2BP2Q7Z5L9 587 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 MIB1Q86YT6 1006 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 RNF139Q8WU17 664 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 EDEM1Q92611 657 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 TTYH3Q9C0H2 523 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 LINC00597Q9H2U6 94 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 MFSD1Q9H3U5 465 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 EBF3Q9H4W6 596 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 SYNCQ9H7C4 482 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 OLA1Q9NTK5 396 aaKnown RBP15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 GTSE1Q9NYZ3 720 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 TJP2Q9UDY2 1190 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 RASAL2Q9UJF2 1139 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 STRIP2Q9ULQ0 834 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 SH3BP1Q9Y3L3 701 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 WNT6Q9Y6F9 365 aa15.2■□□□□ 0.02
SQSTM1-205ENST00000464493 KIF26AQ9ULI4 1882 aaPredicted RBP15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 E2F8A0AVK6 867 aa15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 LRRC53A6NM62 1247 aa15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 STK25O00506 426 aa15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 SLC9A3R1O14745 358 aaPredicted RBP15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 PDGFBP01127 241 aaPredicted RBP15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 IRF1P10914 325 aa15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 GLULP15104 373 aa15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 KPNA1P52294 538 aaPredicted RBP15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 MLLT6P55198 1093 aaPredicted RBP15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 STARD6P59095 220 aa15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 COG7P83436 770 aa15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 FMO1Q01740 532 aa15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 RUNX3Q13761 415 aa15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 EML3Q32P44 896 aa15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 ITPRIPL2Q3MIP1 535 aa15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 ERICH1Q86X53 443 aa15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 TTC8Q8TAM2 541 aa15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 IPO4Q8TEX9 1081 aaKnown RBP15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 CPA5Q8WXQ8 436 aa15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 FAM149B1Q96BN6 582 aa15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 HPS4Q9NQG7 708 aa15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 MARCH2Q9P0N8 246 aa15.19■□□□□ 0.02
SQSTM1-205ENST00000464493 A0A1W2PQJ5 194 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 ERBB2P04626 1255 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 NCAM1P13591 858 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 ARSAP15289 507 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 YWHAZP63104 245 aaKnown RBP15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 NOMO3P69849 1222 aa15.18■□□□□ 0.02
SQSTM1-205ENST00000464493 PTPN20Q4JDL3 420 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms