RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 KCTD13Q8WZ19 329 aa17.9■□□□□ 0.46
VPS52-215ENST00000464425 ZFRQ96KR1 1074 aaKnown RBP17.9■□□□□ 0.46
VPS52-215ENST00000464425 NELL2Q99435 816 aa17.9■□□□□ 0.46
VPS52-215ENST00000464425 CYLDQ9NQC7 956 aa17.9■□□□□ 0.46
VPS52-215ENST00000464425 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.9■□□□□ 0.46
VPS52-215ENST00000464425 IFNKQ9P0W0 207 aa17.9■□□□□ 0.46
VPS52-215ENST00000464425 MRPS17Q9Y2R5 130 aaKnown RBP17.9■□□□□ 0.46
VPS52-215ENST00000464425 FHOD1Q9Y613 1164 aa17.9■□□□□ 0.46
VPS52-215ENST00000464425 PATJQ8NI35 1801 aa17.9■□□□□ 0.46
VPS52-215ENST00000464425 MED7O43513 233 aa17.89■□□□□ 0.45
VPS52-215ENST00000464425 GABBR2O75899 941 aa17.89■□□□□ 0.45
VPS52-215ENST00000464425 RALAP11233 206 aa17.89■□□□□ 0.45
VPS52-215ENST00000464425 UCHL3P15374 230 aa17.89■□□□□ 0.45
VPS52-215ENST00000464425 CTHP32929 405 aa17.89■□□□□ 0.45
VPS52-215ENST00000464425 PSEN1P49768 467 aa17.89■□□□□ 0.45
VPS52-215ENST00000464425 MLLT6P55198 1093 aaPredicted RBP17.89■□□□□ 0.45
VPS52-215ENST00000464425 YWHAGP61981 247 aaKnown RBP eCLIP17.89■□□□□ 0.45
VPS52-215ENST00000464425 DRAP1Q14919 205 aaPredicted RBP17.89■□□□□ 0.45
VPS52-215ENST00000464425 EML3Q32P44 896 aa17.89■□□□□ 0.45
VPS52-215ENST00000464425 PM20D1Q6GTS8 502 aa17.89■□□□□ 0.45
VPS52-215ENST00000464425 TXNDC11Q6PKC3 985 aa17.89■□□□□ 0.45
VPS52-215ENST00000464425 NAA15Q9BXJ9 866 aaKnown RBP17.89■□□□□ 0.45
VPS52-215ENST00000464425 WDFY4Q6ZS81 3184 aa17.88■□□□□ 0.45
VPS52-215ENST00000464425 PBX1P40424 430 aa17.88■□□□□ 0.45
VPS52-215ENST00000464425 PTK2Q05397 1052 aa17.88■□□□□ 0.45
VPS52-215ENST00000464425 RALGPS2Q86X27 583 aaPredicted RBP17.88■□□□□ 0.45
VPS52-215ENST00000464425 DDX42Q86XP3 938 aaKnown RBP eCLIP17.88■□□□□ 0.45
VPS52-215ENST00000464425 ARHGAP18Q8N392 663 aa17.88■□□□□ 0.45
VPS52-215ENST00000464425 CPA6Q8N4T0 437 aa17.88■□□□□ 0.45
VPS52-215ENST00000464425 DTWD2Q8NBA8 298 aa17.88■□□□□ 0.45
VPS52-215ENST00000464425 PRSS33Q8NF86 280 aa17.88■□□□□ 0.45
VPS52-215ENST00000464425 NEK11Q8NG66 645 aa17.88■□□□□ 0.45
VPS52-215ENST00000464425 ATP2A3Q93084 1043 aa17.88■□□□□ 0.45
VPS52-215ENST00000464425 WBP2Q969T9 261 aa17.88■□□□□ 0.45
VPS52-215ENST00000464425 PCMTD1Q96MG8 357 aaPredicted RBP17.88■□□□□ 0.45
VPS52-215ENST00000464425 KLF16Q9BXK1 252 aaPredicted RBP17.88■□□□□ 0.45
VPS52-215ENST00000464425 STK33Q9BYT3 514 aa17.88■□□□□ 0.45
VPS52-215ENST00000464425 XPO4Q9C0E2 1151 aaKnown RBP17.88■□□□□ 0.45
VPS52-215ENST00000464425 GANQ9H2C0 597 aa17.88■□□□□ 0.45
VPS52-215ENST00000464425 ECT2Q9H8V3 914 aa17.88■□□□□ 0.45
VPS52-215ENST00000464425 ST7Q9NRC1 585 aa17.88■□□□□ 0.45
VPS52-215ENST00000464425 FAM207AQ9NSI2 230 aaPredicted RBP17.88■□□□□ 0.45
VPS52-215ENST00000464425 CLIC5Q9NZA1 410 aa17.88■□□□□ 0.45
VPS52-215ENST00000464425 DNMT3LQ9UJW3 386 aa17.88■□□□□ 0.45
VPS52-215ENST00000464425 SH3BP1Q9Y3L3 701 aa17.88■□□□□ 0.45
VPS52-215ENST00000464425 KMT2EQ8IZD2 1858 aa17.87■□□□□ 0.45
VPS52-215ENST00000464425 MYO16Q9Y6X6 1858 aa17.87■□□□□ 0.45
VPS52-215ENST00000464425 CLCN1P35523 988 aa17.87■□□□□ 0.45
VPS52-215ENST00000464425 GPD2P43304 727 aa17.87■□□□□ 0.45
VPS52-215ENST00000464425 PON2Q15165 354 aa17.87■□□□□ 0.45
VPS52-215ENST00000464425 TADA2BQ86TJ2 420 aa17.87■□□□□ 0.45
VPS52-215ENST00000464425 SLC47A2Q86VL8 602 aa17.87■□□□□ 0.45
VPS52-215ENST00000464425 MIB1Q86YT6 1006 aa17.87■□□□□ 0.45
VPS52-215ENST00000464425 FAM71AQ8IYT1 594 aa17.87■□□□□ 0.45
VPS52-215ENST00000464425 ZNF687Q8N1G0 1237 aa17.87■□□□□ 0.45
VPS52-215ENST00000464425 MSANTD3Q96H12 275 aa17.87■□□□□ 0.45
VPS52-215ENST00000464425 HSFY1Q96LI6 401 aa17.87■□□□□ 0.45
VPS52-215ENST00000464425 OSBPL6Q9BZF3 934 aa17.87■□□□□ 0.45
VPS52-215ENST00000464425 MIS12Q9H081 205 aa17.87■□□□□ 0.45
VPS52-215ENST00000464425 LMAN1LQ9HAT1 526 aa17.87■□□□□ 0.45
VPS52-215ENST00000464425 CNGB3Q9NQW8 809 aa17.87■□□□□ 0.45
VPS52-215ENST00000464425 DLGAP2Q9P1A6 1054 aa17.87■□□□□ 0.45
VPS52-215ENST00000464425 RASAL2Q9UJF2 1139 aa17.87■□□□□ 0.45
VPS52-215ENST00000464425 COL4A2P08572 1712 aa17.86■□□□□ 0.45
VPS52-215ENST00000464425 E2F8A0AVK6 867 aa17.86■□□□□ 0.45
VPS52-215ENST00000464425 YJEFN3A6XGL0 299 aa17.86■□□□□ 0.45
VPS52-215ENST00000464425 E7ENQ6 273 aa17.86■□□□□ 0.45
VPS52-215ENST00000464425 SLC9A3R1O14745 358 aaPredicted RBP17.86■□□□□ 0.45
VPS52-215ENST00000464425 NCAM2O15394 837 aa17.86■□□□□ 0.45
VPS52-215ENST00000464425 GALR2O43603 387 aaPredicted RBP17.86■□□□□ 0.45
VPS52-215ENST00000464425 GJA4P35212 333 aa17.86■□□□□ 0.45
VPS52-215ENST00000464425 EFEMP1Q12805 493 aa17.86■□□□□ 0.45
VPS52-215ENST00000464425 FZD5Q13467 585 aa17.86■□□□□ 0.45
VPS52-215ENST00000464425 FIGNQ5HY92 759 aa17.86■□□□□ 0.45
VPS52-215ENST00000464425 BSPRYQ5W0U4 402 aa17.86■□□□□ 0.45
VPS52-215ENST00000464425 BTBD8Q5XKL5 378 aa17.86■□□□□ 0.45
VPS52-215ENST00000464425 KLHDC10Q6PID8 442 aa17.86■□□□□ 0.45
VPS52-215ENST00000464425 RSRC2Q7L4I2 434 aaKnown RBP17.86■□□□□ 0.45
VPS52-215ENST00000464425 BHLHA9Q7RTU4 235 aa17.86■□□□□ 0.45
VPS52-215ENST00000464425 PASD1Q8IV76 773 aa17.86■□□□□ 0.45
VPS52-215ENST00000464425 ADGRG2Q8IZP9 1017 aa17.86■□□□□ 0.45
VPS52-215ENST00000464425 CLEC4CQ8WTT0 213 aa17.86■□□□□ 0.45
VPS52-215ENST00000464425 EDEM1Q92611 657 aa17.86■□□□□ 0.45
VPS52-215ENST00000464425 IQCDQ96DY2 449 aa17.86■□□□□ 0.45
VPS52-215ENST00000464425 CHFRQ96EP1 664 aa17.86■□□□□ 0.45
VPS52-215ENST00000464425 CDK5RAP1Q96SZ6 601 aaKnown RBP17.86■□□□□ 0.45
VPS52-215ENST00000464425 NUP58Q9BVL2 599 aa17.86■□□□□ 0.45
VPS52-215ENST00000464425 EDEM3Q9BZQ6 932 aa17.86■□□□□ 0.45
VPS52-215ENST00000464425 EPHB6O15197 1021 aa17.85■□□□□ 0.45
VPS52-215ENST00000464425 NFATC1O95644 943 aa17.85■□□□□ 0.45
VPS52-215ENST00000464425 NUBP1P53384 320 aa17.85■□□□□ 0.45
VPS52-215ENST00000464425 DAOAP59103 153 aa17.85■□□□□ 0.45
VPS52-215ENST00000464425 POLR2FP61218 127 aaKnown RBP17.85■□□□□ 0.45
VPS52-215ENST00000464425 GOLGA8FQ08AF8 430 aa17.85■□□□□ 0.45
VPS52-215ENST00000464425 GOLGA8DPQ0D2H9 430 aa17.85■□□□□ 0.45
VPS52-215ENST00000464425 TCF15Q12870 199 aa17.85■□□□□ 0.45
VPS52-215ENST00000464425 NR1H3Q13133 447 aa17.85■□□□□ 0.45
VPS52-215ENST00000464425 NAIF1Q69YI7 327 aaPredicted RBP17.85■□□□□ 0.45
VPS52-215ENST00000464425 C1orf228Q6PIY5 440 aa17.85■□□□□ 0.45
VPS52-215ENST00000464425 MUC6Q6W4X9 2439 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms