RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 PROCP04070 461 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 KCNA2P16389 499 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 CACNA2D1P54289 1103 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 SLC25A3Q00325 362 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 ZC3H12AQ5D1E8 599 aaKnown RBP9.38□□□□□ -0.91
HPS4-208ENST00000464362 OTOAQ7RTW8 1153 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 CYP4X1Q8N118 509 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 TTC39CQ8N584 583 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 CHST13Q8NET6 341 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 RNPEPL1Q9HAU8 725 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 IGLV3-22A0A075B6J6 115 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 FAM155BO75949 473 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 B3GAT3O94766 335 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 CPA3P15088 417 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 SH3BGRP55822 239 aaPredicted RBP9.37□□□□□ -0.91
HPS4-208ENST00000464362 POU6F1Q14863 301 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 FRA10AC1Q70Z53 315 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 TAS2R42Q7RTR8 314 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 EGFL8Q99944 293 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 BTBD10Q9BSF8 475 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 SETD4Q9NVD3 440 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 FAM53CQ9NYF3 392 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 DTNAQ9Y4J8 743 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 CDY2AQ9Y6F7 541 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 CDY1Q9Y6F8 540 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 ADGRA2Q96PE1 1338 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 BAZ2AQ9UIF9 1905 aaKnown RBP9.37□□□□□ -0.91
HPS4-208ENST00000464362 A0A0B4J269 797 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 E5RI56 91 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 MAGEB2O15479 319 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 NFICP08651 508 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 ERVK-10P10266 1014 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 MAPTP10636 758 aaKnown RBP9.37□□□□□ -0.91
HPS4-208ENST00000464362 MSX2P35548 267 aaPredicted RBP9.37□□□□□ -0.91
HPS4-208ENST00000464362 CLK2P49760 499 aaKnown RBP9.37□□□□□ -0.91
HPS4-208ENST00000464362 DSG1Q02413 1049 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 BST1Q10588 318 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 CAPRIN1Q14444 709 aaKnown RBP9.37□□□□□ -0.91
HPS4-208ENST00000464362 STILQ15468 1287 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 DCAF12L1Q5VU92 463 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 DIS3LQ8TF46 1054 aaKnown RBP9.37□□□□□ -0.91
HPS4-208ENST00000464362 P2RX7Q99572 595 aaKnown RBP9.37□□□□□ -0.91
HPS4-208ENST00000464362 ZNF518BQ9C0D4 1074 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 ILKAPQ9H0C8 392 aaPredicted RBP9.37□□□□□ -0.91
HPS4-208ENST00000464362 PIF1Q9H611 641 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 IL1RAPL1Q9NZN1 696 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 APPL1Q9UKG1 709 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 PRG3Q9Y2Y8 225 aaPredicted RBP9.37□□□□□ -0.91
HPS4-208ENST00000464362 UBIAD1Q9Y5Z9 338 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 CASZ1Q86V15 1759 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 NID2Q14112 1375 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 AP1G2O75843 785 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 LSM8O95777 96 aaKnown RBP9.37□□□□□ -0.91
HPS4-208ENST00000464362 UBA1P22314 1058 aaKnown RBP9.37□□□□□ -0.91
HPS4-208ENST00000464362 PTDSS1P48651 473 aaKnown RBP9.37□□□□□ -0.91
HPS4-208ENST00000464362 MAP3K7CLP57077 242 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 JAM2P57087 298 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 ZNF235Q14590 738 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 TRABD2AQ86V40 505 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 ECHDC2Q86YB7 292 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 MIB1Q86YT6 1006 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 DAW1Q8N136 415 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 HELQQ8TDG4 1101 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 CYGBQ8WWM9 190 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 CENPTQ96BT3 561 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 HIC2Q96JB3 615 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 OLFM3Q96PB7 478 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 GRHL1Q9NZI5 618 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 RPTORQ8N122 1335 aa9.37□□□□□ -0.91
HPS4-208ENST00000464362 ANGPT2O15123 496 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 PHGDHO43175 533 aaKnown RBP9.36□□□□□ -0.91
HPS4-208ENST00000464362 GLRA3O75311 464 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 HNRNPCP07910 306 aaKnown RBP eCLIP9.36□□□□□ -0.91
HPS4-208ENST00000464362 CPB1P15086 417 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 GTF2A2P52657 109 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 PKNOX1P55347 436 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 CAPSQ13938 189 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 CRY2Q49AN0 593 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 METTL7BQ6UX53 244 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 ALYREFQ86V81 257 aaKnown RBP9.36□□□□□ -0.91
HPS4-208ENST00000464362 THEM5Q8N1Q8 247 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 ULK4Q96C45 1275 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 PHF21BQ96EK2 531 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 APOPT1Q96IL0 206 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 VCPIP1Q96JH7 1222 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 CATSPER2Q96P56 530 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 DRC3Q9H069 523 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 SPATC1LQ9H0A9 340 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 PAPOLBQ9NRJ5 636 aaKnown RBP9.36□□□□□ -0.91
HPS4-208ENST00000464362 RUVBL2Q9Y230 463 aaKnown RBP9.36□□□□□ -0.91
HPS4-208ENST00000464362 SNX13Q9Y5W8 968 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 URB1O60287 2271 aaKnown RBP9.36□□□□□ -0.91
HPS4-208ENST00000464362 TM9SF1O15321 606 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 ZNF862O60290 1169 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 FAM200BP0CF97 657 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 CSE1LP55060 971 aaKnown RBP9.36□□□□□ -0.91
HPS4-208ENST00000464362 EFHC1Q5JVL4 640 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 TATDN1Q6P1N9 297 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 LRRC74BQ6ZQY2 392 aa9.36□□□□□ -0.91
HPS4-208ENST00000464362 C15orf52Q6ZUT6 534 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms