RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 COMMD8Q9NX08 183 aa15.34■□□□□ 0.05
SMC1A-204ENST00000463684 NFE2L3Q9Y4A8 694 aa15.34■□□□□ 0.05
SMC1A-204ENST00000463684 RAD54BQ9Y620 910 aa15.34■□□□□ 0.05
SMC1A-204ENST00000463684 ADAMTS9Q9P2N4 1935 aa15.34■□□□□ 0.05
SMC1A-204ENST00000463684 PLXND1Q9Y4D7 1925 aa15.34■□□□□ 0.05
SMC1A-204ENST00000463684 LOC400499M0QZD8 3231 aa15.34■□□□□ 0.05
SMC1A-204ENST00000463684 PCDH15Q96QU1 1955 aa15.33■□□□□ 0.05
SMC1A-204ENST00000463684 CACNG3O60359 315 aa15.33■□□□□ 0.04
SMC1A-204ENST00000463684 CER1O95813 267 aa15.33■□□□□ 0.04
SMC1A-204ENST00000463684 DLATP10515 647 aaKnown RBP15.33■□□□□ 0.04
SMC1A-204ENST00000463684 TYRP14679 529 aa15.33■□□□□ 0.04
SMC1A-204ENST00000463684 STARD3Q14849 445 aa15.33■□□□□ 0.04
SMC1A-204ENST00000463684 IL27RAQ6UWB1 636 aa15.33■□□□□ 0.04
SMC1A-204ENST00000463684 TPGS1Q6ZTW0 290 aa15.33■□□□□ 0.04
SMC1A-204ENST00000463684 HTR3DQ70Z44 454 aa15.33■□□□□ 0.04
SMC1A-204ENST00000463684 TMPRSS7Q7RTY8 843 aa15.33■□□□□ 0.04
SMC1A-204ENST00000463684 DNASE2BQ8WZ79 361 aa15.33■□□□□ 0.04
SMC1A-204ENST00000463684 CDC6Q99741 560 aa15.33■□□□□ 0.04
SMC1A-204ENST00000463684 MIR1-1HGQ9H1L0 117 aa15.33■□□□□ 0.04
SMC1A-204ENST00000463684 GAREM1Q9H706 876 aa15.33■□□□□ 0.04
SMC1A-204ENST00000463684 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.33■□□□□ 0.042e-6■■■■■ 144.6
SMC1A-204ENST00000463684 CACNA2D2Q9NY47 1150 aa15.33■□□□□ 0.04
SMC1A-204ENST00000463684 NME7Q9Y5B8 376 aa15.33■□□□□ 0.04
SMC1A-204ENST00000463684 PI4KAP42356 2102 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 GON4LQ3T8J9 2241 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 PRRT4C9JH25 899 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 ZNF883P0CG24 379 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 NCAM1P13591 858 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 MATKP42679 507 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 DGKGP49619 791 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 SLC5A3P53794 718 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 GOLGA8FQ08AF8 430 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 GOLGA8DPQ0D2H9 430 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 TRPC3Q13507 836 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 METTL3Q86U44 580 aaKnown RBP15.32■□□□□ 0.04
SMC1A-204ENST00000463684 CCDC65Q8IXS2 484 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 RDH13Q8NBN7 331 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 GLIS3Q8NEA6 775 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 CADM4Q8NFZ8 388 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 RHBDD1Q8TEB9 315 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 WBP2Q969T9 261 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 COL26A1Q96A83 441 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 TOE1Q96GM8 510 aaKnown RBP15.32■□□□□ 0.04
SMC1A-204ENST00000463684 TMX3Q96JJ7 454 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 GPR174Q9BXC1 333 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 FGFBP2Q9BYJ0 223 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 PRDM16Q9HAZ2 1276 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 DMAP1Q9NPF5 467 aaPredicted RBP15.32■□□□□ 0.04
SMC1A-204ENST00000463684 CD93Q9NPY3 652 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 TM7SF3Q9NS93 570 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 WSB2Q9NYS7 404 aaPredicted RBP15.32■□□□□ 0.04
SMC1A-204ENST00000463684 IL37Q9NZH6 218 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 HSPBP1Q9NZL4 362 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 GMIPQ9P107 970 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 DKK4Q9UBT3 224 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 NXF1Q9UBU9 619 aaKnown RBP15.32■□□□□ 0.04
SMC1A-204ENST00000463684 LSM7Q9UK45 103 aaKnown RBP15.32■□□□□ 0.04
SMC1A-204ENST00000463684 SMC3Q9UQE7 1217 aa15.32■□□□□ 0.04
SMC1A-204ENST00000463684 FRMD3A2A2Y4 597 aa15.31■□□□□ 0.04
SMC1A-204ENST00000463684 WASH3PC4AMC7 463 aa15.31■□□□□ 0.04
SMC1A-204ENST00000463684 TLR5O60602 858 aa15.31■□□□□ 0.04
SMC1A-204ENST00000463684 NEFLP07196 543 aa15.31■□□□□ 0.04
SMC1A-204ENST00000463684 ZDHHC11BP0C7U3 371 aa15.31■□□□□ 0.04
SMC1A-204ENST00000463684 OXTRP30559 389 aa15.31■□□□□ 0.04
SMC1A-204ENST00000463684 SUZ12Q15022 739 aaKnown RBP15.31■□□□□ 0.04
SMC1A-204ENST00000463684 CCDC73Q6ZRK6 1079 aa15.31■□□□□ 0.04
SMC1A-204ENST00000463684 GALNT15Q8N3T1 639 aa15.31■□□□□ 0.04
SMC1A-204ENST00000463684 ZCCHC9Q8N567 271 aaKnown RBP15.31■□□□□ 0.04
SMC1A-204ENST00000463684 TNIP3Q96KP6 325 aa15.31■□□□□ 0.04
SMC1A-204ENST00000463684 BBC3Q96PG8 261 aaPredicted RBP15.31■□□□□ 0.04
SMC1A-204ENST00000463684 IL21RQ9HBE5 538 aa15.31■□□□□ 0.04
SMC1A-204ENST00000463684 ITM2CQ9NQX7 267 aa15.31■□□□□ 0.04
SMC1A-204ENST00000463684 TLR8Q9NR97 1041 aaKnown RBP15.31■□□□□ 0.04
SMC1A-204ENST00000463684 MARK1Q9P0L2 795 aa15.31■□□□□ 0.04
SMC1A-204ENST00000463684 SRPRBQ9Y5M8 271 aaKnown RBP15.31■□□□□ 0.04
SMC1A-204ENST00000463684 GOLGA8CPA6NN73 597 aa15.3■□□□□ 0.04
SMC1A-204ENST00000463684 BCAT2O15382 392 aaPredicted RBP15.3■□□□□ 0.04
SMC1A-204ENST00000463684 CILPO75339 1184 aa15.3■□□□□ 0.04
SMC1A-204ENST00000463684 CLSTN1O94985 981 aa15.3■□□□□ 0.04
SMC1A-204ENST00000463684 ATICP31939 592 aa15.3■□□□□ 0.04
SMC1A-204ENST00000463684 ATP5C1P36542 298 aaKnown RBP15.3■□□□□ 0.04
SMC1A-204ENST00000463684 STAT6P42226 847 aa15.3■□□□□ 0.04
SMC1A-204ENST00000463684 ZNF132P52740 706 aa15.3■□□□□ 0.04
SMC1A-204ENST00000463684 CYP4F3Q08477 520 aa15.3■□□□□ 0.04
SMC1A-204ENST00000463684 SNRNP35Q16560 246 aaKnown RBP15.3■□□□□ 0.04
SMC1A-204ENST00000463684 HLA-BQ31612 363 aa15.3■□□□□ 0.04
SMC1A-204ENST00000463684 DCAF12L1Q5VU92 463 aa15.3■□□□□ 0.04
SMC1A-204ENST00000463684 FAM35AQ86V20 835 aa15.3■□□□□ 0.04
SMC1A-204ENST00000463684 SYAP1Q96A49 352 aaPredicted RBP15.3■□□□□ 0.04
SMC1A-204ENST00000463684 CCDC127Q96BQ5 260 aa15.3■□□□□ 0.04
SMC1A-204ENST00000463684 SMARCD1Q96GM5 515 aa15.3■□□□□ 0.04
SMC1A-204ENST00000463684 CGRRF1Q99675 332 aa15.3■□□□□ 0.04
SMC1A-204ENST00000463684 KLF16Q9BXK1 252 aaPredicted RBP15.3■□□□□ 0.04
SMC1A-204ENST00000463684 PANK2Q9BZ23 570 aa15.3■□□□□ 0.04
SMC1A-204ENST00000463684 FBXO44Q9H4M3 255 aa15.3■□□□□ 0.04
SMC1A-204ENST00000463684 CLIC4Q9Y696 253 aa15.3■□□□□ 0.04
SMC1A-204ENST00000463684 STON1Q9Y6Q2 735 aa15.3■□□□□ 0.04
SMC1A-204ENST00000463684 FAM92AA1XBS5 289 aa15.29■□□□□ 0.04
SMC1A-204ENST00000463684 TRABD2BA6NFA1 517 aa15.29■□□□□ 0.04
SMC1A-204ENST00000463684 METTL12A8MUP2 240 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms