RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 A0A1W2PQD8 194 aa18.3■□□□□ 0.52
HMGN1-209ENST00000463631 ARHGAP33O14559 1287 aa18.3■□□□□ 0.52
HMGN1-209ENST00000463631 CLDN10P78369 228 aa18.3■□□□□ 0.52
HMGN1-209ENST00000463631 GRAMD4Q6IC98 578 aa18.3■□□□□ 0.52
HMGN1-209ENST00000463631 HTR3DQ70Z44 454 aa18.3■□□□□ 0.52
HMGN1-209ENST00000463631 FUKQ8N0W3 1084 aa18.3■□□□□ 0.52
HMGN1-209ENST00000463631 MINDY1Q8N5J2 469 aa18.3■□□□□ 0.52
HMGN1-209ENST00000463631 LINC00301Q8NCQ3 95 aa18.3■□□□□ 0.52
HMGN1-209ENST00000463631 WBP2Q969T9 261 aa18.3■□□□□ 0.52
HMGN1-209ENST00000463631 C7orf25Q9BPX7 421 aa18.3■□□□□ 0.52
HMGN1-209ENST00000463631 ZSCAN16Q9H4T2 348 aaPredicted RBP18.3■□□□□ 0.52
HMGN1-209ENST00000463631 MAGEF1Q9HAY2 307 aa18.3■□□□□ 0.52
HMGN1-209ENST00000463631 KRT82Q9NSB4 513 aa18.3■□□□□ 0.52
HMGN1-209ENST00000463631 DNAAF2Q9NVR5 837 aaKnown RBP18.3■□□□□ 0.52
HMGN1-209ENST00000463631 CLIC2O15247 247 aa18.29■□□□□ 0.52
HMGN1-209ENST00000463631 TLR5O60602 858 aa18.29■□□□□ 0.52
HMGN1-209ENST00000463631 NDUFV2P19404 249 aa18.29■□□□□ 0.52
HMGN1-209ENST00000463631 AP3M2P53677 418 aa18.29■□□□□ 0.52
HMGN1-209ENST00000463631 ZNF423Q2M1K9 1284 aa18.29■□□□□ 0.52
HMGN1-209ENST00000463631 ZNF699Q32M78 642 aa18.29■□□□□ 0.52
HMGN1-209ENST00000463631 ZNF667Q5HYK9 610 aa18.29■□□□□ 0.52
HMGN1-209ENST00000463631 EGFLAMQ63HQ2 1017 aa18.29■□□□□ 0.52
HMGN1-209ENST00000463631 UNC13DQ70J99 1090 aa18.29■□□□□ 0.52
HMGN1-209ENST00000463631 SLC41A1Q8IVJ1 513 aa18.29■□□□□ 0.52
HMGN1-209ENST00000463631 PIAS4Q8N2W9 510 aaPredicted RBP18.29■□□□□ 0.52
HMGN1-209ENST00000463631 IQUBQ8NA54 791 aa18.29■□□□□ 0.52
HMGN1-209ENST00000463631 ZMIZ2Q8NF64 920 aa18.29■□□□□ 0.52
HMGN1-209ENST00000463631 MED10Q9BTT4 135 aa18.29■□□□□ 0.52
HMGN1-209ENST00000463631 GTPBP2Q9BX10 602 aaKnown RBP18.29■□□□□ 0.52
HMGN1-209ENST00000463631 FBXO44Q9H4M3 255 aa18.29■□□□□ 0.52
HMGN1-209ENST00000463631 CSNK1G1Q9HCP0 422 aa18.29■□□□□ 0.52
HMGN1-209ENST00000463631 CYLDQ9NQC7 956 aa18.29■□□□□ 0.52
HMGN1-209ENST00000463631 DNAJC17Q9NVM6 304 aaKnown RBP18.29■□□□□ 0.52
HMGN1-209ENST00000463631 TRIM24O15164 1050 aa18.28■□□□□ 0.52
HMGN1-209ENST00000463631 ZBTB24O43167 697 aaPredicted RBP18.28■□□□□ 0.52
HMGN1-209ENST00000463631 PPP6R2O75170 966 aa18.28■□□□□ 0.52
HMGN1-209ENST00000463631 GJB3O75712 270 aa18.28■□□□□ 0.52
HMGN1-209ENST00000463631 AP1G2O75843 785 aa18.28■□□□□ 0.52
HMGN1-209ENST00000463631 CD59P13987 128 aa18.28■□□□□ 0.52
HMGN1-209ENST00000463631 RDXP35241 583 aaKnown RBP18.28■□□□□ 0.52
HMGN1-209ENST00000463631 CDH8P55286 799 aa18.28■□□□□ 0.52
HMGN1-209ENST00000463631 SLC14A1Q13336 389 aa18.28■□□□□ 0.52
HMGN1-209ENST00000463631 STK38Q15208 465 aa18.28■□□□□ 0.52
HMGN1-209ENST00000463631 RAB44Q7Z6P3 723 aaPredicted RBP18.28■□□□□ 0.52
HMGN1-209ENST00000463631 NELFCDQ8IXH7 590 aa18.28■□□□□ 0.52
HMGN1-209ENST00000463631 CHPFQ8IZ52 775 aa18.28■□□□□ 0.52
HMGN1-209ENST00000463631 IPO4Q8TEX9 1081 aaKnown RBP18.28■□□□□ 0.52
HMGN1-209ENST00000463631 INTS4Q96HW7 963 aaKnown RBP18.28■□□□□ 0.52
HMGN1-209ENST00000463631 HSPA12BQ96MM6 686 aa18.28■□□□□ 0.52
HMGN1-209ENST00000463631 XPO6Q96QU8 1125 aaKnown RBP18.28■□□□□ 0.52
HMGN1-209ENST00000463631 ACOX2Q99424 681 aa18.28■□□□□ 0.52
HMGN1-209ENST00000463631 SMOQ99835 787 aa18.28■□□□□ 0.52
HMGN1-209ENST00000463631 KLF16Q9BXK1 252 aaPredicted RBP18.28■□□□□ 0.52
HMGN1-209ENST00000463631 NACA2Q9H009 215 aa18.28■□□□□ 0.52
HMGN1-209ENST00000463631 FSCN3Q9NQT6 498 aa18.28■□□□□ 0.52
HMGN1-209ENST00000463631 TLR8Q9NR97 1041 aaKnown RBP18.28■□□□□ 0.52
HMGN1-209ENST00000463631 WDR35Q9P2L0 1181 aa18.28■□□□□ 0.52
HMGN1-209ENST00000463631 SUSD2Q9UGT4 822 aa18.28■□□□□ 0.52
HMGN1-209ENST00000463631 MYH10P35580 1976 aa18.28■□□□□ 0.52
HMGN1-209ENST00000463631 APC2O95996 2303 aa18.27■□□□□ 0.52
HMGN1-209ENST00000463631 ACACAQ13085 2346 aa18.27■□□□□ 0.52
HMGN1-209ENST00000463631 GFRA2O00451 464 aa18.27■□□□□ 0.52
HMGN1-209ENST00000463631 SPTLC2O15270 562 aa18.27■□□□□ 0.52
HMGN1-209ENST00000463631 PHACTR2O75167 634 aa18.27■□□□□ 0.52
HMGN1-209ENST00000463631 SYPP08247 313 aa18.27■□□□□ 0.52
HMGN1-209ENST00000463631 IRF1P10914 325 aa18.27■□□□□ 0.52
HMGN1-209ENST00000463631 TYRP14679 529 aa18.27■□□□□ 0.52
HMGN1-209ENST00000463631 PGFP49763 221 aa18.27■□□□□ 0.52
HMGN1-209ENST00000463631 FAM193AP78312 1265 aa18.27■□□□□ 0.52
HMGN1-209ENST00000463631 BIRC3Q13489 604 aa18.27■□□□□ 0.52
HMGN1-209ENST00000463631 NCOA4Q13772 614 aa18.27■□□□□ 0.52
HMGN1-209ENST00000463631 COL9A2Q14055 689 aaPredicted RBP18.27■□□□□ 0.52
HMGN1-209ENST00000463631 SDE2Q6IQ49 451 aa18.27■□□□□ 0.52
HMGN1-209ENST00000463631 TRIML1Q8N9V2 468 aa18.27■□□□□ 0.52
HMGN1-209ENST00000463631 GOLGA5Q8TBA6 731 aa18.27■□□□□ 0.52
HMGN1-209ENST00000463631 PLEKHO2Q8TD55 490 aa18.27■□□□□ 0.52
HMGN1-209ENST00000463631 PARD3BQ8TEW8 1205 aa18.27■□□□□ 0.52
HMGN1-209ENST00000463631 TMEM174Q8WUU8 243 aa18.27■□□□□ 0.52
HMGN1-209ENST00000463631 DHX58Q96C10 678 aa18.27■□□□□ 0.52
HMGN1-209ENST00000463631 ZNF419Q96HQ0 510 aaPredicted RBP18.27■□□□□ 0.52
HMGN1-209ENST00000463631 BBS2Q9BXC9 721 aa18.27■□□□□ 0.52
HMGN1-209ENST00000463631 SDCBP2Q9H190 292 aa18.27■□□□□ 0.52
HMGN1-209ENST00000463631 FAM124BQ9H5Z6 455 aaPredicted RBP18.27■□□□□ 0.52
HMGN1-209ENST00000463631 TFIP11Q9UBB9 837 aaKnown RBP18.27■□□□□ 0.52
HMGN1-209ENST00000463631 CYP8B1Q9UNU6 501 aa18.27■□□□□ 0.52
HMGN1-209ENST00000463631 PRRT4C9JH25 899 aa18.26■□□□□ 0.51
HMGN1-209ENST00000463631 NEDD8-MDP1E9PL57 170 aa18.26■□□□□ 0.51
HMGN1-209ENST00000463631 EXOC3O60645 756 aa18.26■□□□□ 0.51
HMGN1-209ENST00000463631 CAPNS1P04632 268 aa18.26■□□□□ 0.51
HMGN1-209ENST00000463631 HOXB3P14651 431 aaPredicted RBP18.26■□□□□ 0.51
HMGN1-209ENST00000463631 WASP42768 502 aa18.26■□□□□ 0.51
HMGN1-209ENST00000463631 CASP4P49662 377 aa18.26■□□□□ 0.51
HMGN1-209ENST00000463631 GOLGA8FQ08AF8 430 aa18.26■□□□□ 0.51
HMGN1-209ENST00000463631 GOLGA8DPQ0D2H9 430 aa18.26■□□□□ 0.51
HMGN1-209ENST00000463631 KNOP1Q1ED39 458 aaKnown RBP18.26■□□□□ 0.51
HMGN1-209ENST00000463631 KLHDC10Q6PID8 442 aa18.26■□□□□ 0.51
HMGN1-209ENST00000463631 SCARA5Q6ZMJ2 495 aa18.26■□□□□ 0.51
HMGN1-209ENST00000463631 ACOT1Q86TX2 421 aa18.26■□□□□ 0.51
HMGN1-209ENST00000463631 CRYBG2Q8N1P7 616 aa18.26■□□□□ 0.51
HMGN1-209ENST00000463631 DEFB119Q8N690 84 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms