RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 PWP2Q15269 919 aaKnown RBP4.11□□□□□ -1.75
SCFD1-204ENST00000463622 ELAVL1Q15717 326 aaKnown RBP4.11□□□□□ -1.75
SCFD1-204ENST00000463622 PTPROQ16827 1216 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 TIGD7Q6NT04 549 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-204ENST00000463622 TUBA3EQ6PEY2 450 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 KANSL1Q7Z3B3 1105 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 SESTD1Q86VW0 696 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 HOMER1Q86YM7 354 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 CAGE1Q8TC20 777 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 AFAP1L1Q8TED9 768 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 NEU4Q8WWR8 484 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-204ENST00000463622 LPPQ93052 612 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 GTF3C6Q969F1 213 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 TCF25Q9BQ70 676 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 C17orf80Q9BSJ5 609 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 ACAD9Q9H845 621 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 ING3Q9NXR8 418 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 MUTYHQ9UIF7 546 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 LIMCH1Q9UPQ0 1083 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 REXO2Q9Y3B8 237 aaKnown RBP4.11□□□□□ -1.75
SCFD1-204ENST00000463622 INSL6Q9Y581 213 aa4.11□□□□□ -1.75
SCFD1-204ENST00000463622 DDX49Q9Y6V7 483 aaKnown RBP4.11□□□□□ -1.75
SCFD1-204ENST00000463622 LRRC37A2A6NM11 1700 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 RIF1Q5UIP0 2472 aaKnown RBP4.1□□□□□ -1.75
SCFD1-204ENST00000463622 A0A0A6YYJ9 748 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 ZBTB43O43298 467 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 TTLL1O95922 423 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 HMGB1P09429 215 aaKnown RBP4.1□□□□□ -1.75
SCFD1-204ENST00000463622 VSIG10L2P0DP72 767 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 TOP1P11387 765 aaKnown RBP4.1□□□□□ -1.75
SCFD1-204ENST00000463622 CPT1AP50416 773 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 ADCY1Q08828 1119 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 ZNF543Q08ER8 600 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 ABHD18Q0P651 414 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 EPC2Q52LR7 807 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 TCEAL5Q5H9L2 206 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 KIAA1841Q6NSI8 718 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 TMTC3Q6ZXV5 915 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 IQCA1Q86XH1 822 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 DGKHQ86XP1 1220 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 TMPRSS6Q8IU80 811 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 FBXO16Q8IX29 292 aaPredicted RBP4.1□□□□□ -1.75
SCFD1-204ENST00000463622 GMCL1P1Q8NEA9 526 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 MENTQ9BUN1 341 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 WDR11Q9BZH6 1224 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 HAPLN2Q9GZV7 340 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 SLKQ9H2G2 1235 aaPredicted RBP4.1□□□□□ -1.75
SCFD1-204ENST00000463622 KAT14Q9H8E8 782 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 MSL2Q9HCI7 577 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 INTS7Q9NVH2 962 aaKnown RBP4.1□□□□□ -1.75
SCFD1-204ENST00000463622 CYP39A1Q9NYL5 469 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 MTUS1Q9ULD2 1270 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 MYH4Q9Y623 1939 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 TECTAO75443 2155 aa4.1□□□□□ -1.75
SCFD1-204ENST00000463622 DCHS1Q96JQ0 3298 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 CCDC69A6NI79 296 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 LOC730098B7Z3J9 87 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 MBTPS2O43462 519 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 OPHN1O60890 802 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 FAM20BO75063 409 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 EYA4O95677 639 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 MYL3P08590 195 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 AVPR2P30518 371 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 KIR2DL3P43628 341 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 METAP2P50579 478 aaKnown RBP eCLIP4.09□□□□□ -1.75
SCFD1-204ENST00000463622 SLC25A3Q00325 362 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 GUCY1B3Q02153 619 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 SEPT7Q16181 437 aaKnown RBP4.09□□□□□ -1.75
SCFD1-204ENST00000463622 PTGISQ16647 500 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 TRIM71Q2Q1W2 868 aaKnown RBP4.09□□□□□ -1.75
SCFD1-204ENST00000463622 FAM214AQ32MH5 1076 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 LRRC8DQ7L1W4 858 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 HSCBQ8IWL3 235 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 GSPT2Q8IYD1 628 aaKnown RBP4.09□□□□□ -1.75
SCFD1-204ENST00000463622 FANCBQ8NB91 859 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 NINJ1Q92982 152 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 MIEF2Q96C03 454 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 CLIP3Q96DZ5 547 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 ZNF274Q96GC6 653 aaPredicted RBP4.09□□□□□ -1.75
SCFD1-204ENST00000463622 TARS2Q9BW92 718 aaKnown RBP4.09□□□□□ -1.75
SCFD1-204ENST00000463622 TRIM8Q9BZR9 551 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 PITHD1Q9GZP4 211 aaPredicted RBP4.09□□□□□ -1.75
SCFD1-204ENST00000463622 RNF146Q9NTX7 359 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 SPTLC3Q9NUV7 552 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 USP18Q9UMW8 372 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 SPTBN4Q9H254 2564 aa4.09□□□□□ -1.75
SCFD1-204ENST00000463622 KRTAP23-1A1A580 65 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 C5orf67F2Z3F1 127 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 CFBP00751 764 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 LINC00271P0C7V0 271 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 CKBP12277 381 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 EDNRBP24530 442 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 GJB2P29033 226 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 ANP32AP39687 249 aaKnown RBP4.09□□□□□ -1.76
SCFD1-204ENST00000463622 NBL1P41271 181 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 KPNA1P52294 538 aaPredicted RBP4.09□□□□□ -1.76
SCFD1-204ENST00000463622 CD69Q07108 199 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 GPM6BQ13491 265 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 NPY5RQ15761 445 aa4.09□□□□□ -1.76
SCFD1-204ENST00000463622 CCDC96Q2M329 555 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms